Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TCF19 Gene 0 70.44 42.62 40.45 23.77 73.29 68.48 84.84 59.93 38.80 58.66 199.11 144.51 61.91 256.26 165.72 189.86 151.36 145.24 33.33 82.22 11.95 25.10 10.61 2 376257 Transcript 0 11.02 7.50 10.42 4.47 9.75 12.73 21.21 13.91 5.07 23.43 73.56 26.07 19.74 73.25 36.24 71.28 69.12 56.31 11.78 39.03 5.74 7.87 2.04 3 376255 Transcript 0 0.00 0.00 4.38 1.96 3.40 13.74 1.94 2.01 6.08 0.00 46.59 6.30 27.92 20.48 14.96 10.60 16.08 6.51 0.00 3.26 0.00 0.00 0.00 4 496421 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.28 0.00 0.00 0.00 0.00 0.00 5 ER1a ExonRegion 0 1.06 3.73 0.00 0.00 0.45 5.81 5.30 0.00 0.00 0.00 1.61 1.44 0.00 7.58 2.42 2.97 0.55 0.62 0.00 0.00 0.00 0.00 0.00 6 ER1b ExonRegion 0 19.83 6.45 8.47 3.16 18.88 32.55 42.45 8.77 7.05 12.76 62.27 16.80 9.97 74.31 33.32 52.62 60.30 36.06 7.94 27.27 8.10 6.92 0.92 7 E1a_E2a KnownJunction 0 6.82 0.00 12.18 3.20 0.00 0.00 3.58 16.31 2.52 26.22 67.86 19.06 18.83 54.62 33.25 65.54 71.06 31.38 8.94 29.53 5.37 8.88 0.00 8 E1a_E2b KnownJunction 0 0.00 0.00 4.38 1.96 3.40 13.74 1.94 2.01 6.08 0.00 46.59 6.30 27.92 20.48 14.96 10.60 16.08 6.51 0.00 3.26 0.00 0.00 0.00 9 I1 Intron 0 4.34 5.36 1.61 2.38 9.41 9.14 5.82 3.77 5.93 4.01 28.90 22.10 14.07 73.48 21.71 81.02 37.73 29.88 3.73 16.21 5.17 4.27 1.72 10 I1_AR1 ActiveIntronRegion 1 4.39 5.43 1.62 2.41 9.52 9.24 5.89 3.81 6.00 4.05 29.24 22.33 14.23 74.32 21.94 81.96 38.17 30.22 3.78 16.40 5.21 4.32 1.74 11 E2_Aa NovelBoundary 0 13.93 3.29 2.78 9.22 3.48 28.28 34.18 12.28 14.81 13.00 48.85 17.71 19.32 108.95 52.04 89.46 60.50 44.23 3.48 34.20 0.00 5.69 0.00 12 ER2a ExonRegion 0 25.19 18.77 19.07 10.22 28.79 32.37 54.76 25.43 12.68 44.08 151.21 57.70 40.39 157.55 73.04 145.32 135.75 136.94 26.40 87.56 11.83 14.72 6.12 13 E2_Ab KnownBoundary 0 31.26 27.82 14.22 17.81 53.23 49.86 61.78 48.88 9.52 47.57 100.66 90.78 26.13 147.33 67.12 163.46 173.07 150.14 43.86 87.25 16.25 11.27 0.00 14 ER2b ExonRegion 0 28.01 31.00 26.71 21.17 37.52 47.05 62.09 49.93 29.46 62.33 224.48 95.38 55.82 290.55 120.38 209.15 171.48 197.35 36.32 85.03 13.60 26.04 14.73 15 E2a_E3a KnownJunction 1 40.38 40.39 39.41 20.44 50.25 67.23 112.08 69.58 53.88 70.22 332.51 57.62 86.03 375.77 105.69 182.69 223.09 166.44 50.92 101.69 14.46 28.04 14.94 16 I2 Intron 0 11.65 10.28 5.84 4.55 14.90 5.16 15.00 7.25 2.94 7.76 22.63 28.81 11.30 23.76 13.67 18.26 10.78 21.45 1.63 20.42 1.69 1.20 0.75 17 I2_SR1 SilentIntronRegion 0 11.68 10.30 5.86 4.56 14.93 5.17 15.03 7.27 2.95 7.78 22.69 28.88 11.33 23.82 13.71 18.30 10.80 21.51 1.63 20.47 1.69 1.20 0.75 18 E3_Aa NovelBoundary 1 62.38 43.41 15.58 16.45 70.71 13.86 40.76 8.42 7.55 11.63 33.27 63.77 19.97 24.19 27.69 39.14 21.60 22.72 8.75 37.33 0.00 2.82 3.24 19 ER3a ExonRegion 0 54.19 35.96 41.37 17.86 62.60 83.78 115.05 65.64 57.66 77.84 318.83 117.35 98.24 338.71 109.94 208.60 212.82 204.22 48.53 87.12 16.18 20.40 9.74 20 E3_Ab KnownBoundary 0 88.39 43.74 53.52 24.51 99.41 113.97 159.25 78.99 68.26 92.78 280.28 190.26 168.98 305.79 109.15 271.38 231.88 244.57 48.10 85.90 20.70 18.98 7.09 21 ER3b ExonRegion 0 79.90 40.34 56.79 23.87 50.29 62.80 90.48 80.66 46.62 73.57 279.65 103.67 89.77 355.91 170.58 288.46 187.41 272.31 49.22 91.63 17.96 28.23 12.82 22 E3_Da KnownBoundary 1 75.79 41.97 68.36 28.47 39.39 72.80 111.25 79.72 50.95 86.20 284.65 65.27 67.20 351.58 257.49 345.12 267.98 266.92 27.48 113.01 21.87 38.39 21.26 23 E3a_E3c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.28 0.00 0.00 0.00 0.00 0.00 24 ER3c ExonRegion 0 32.98 45.46 41.40 22.20 50.61 68.83 84.04 64.52 43.58 68.42 233.58 94.85 63.69 311.70 169.59 261.46 178.23 233.57 38.28 84.63 17.90 20.90 11.14 25 E3_Ac KnownBoundary 0 73.57 56.63 55.35 19.71 75.13 98.01 114.69 67.16 44.82 78.06 227.95 82.83 92.53 270.59 227.83 365.55 226.83 343.81 69.37 99.84 14.27 21.92 0.00 26 ER3d ExonRegion 0 58.36 35.92 31.79 18.46 42.73 61.17 80.81 49.32 39.24 57.50 198.50 94.21 72.79 302.42 163.33 215.25 189.35 183.51 30.24 77.83 13.72 23.03 9.75 27 E3b_E4a KnownJunction 0 35.12 26.25 38.17 29.33 51.61 60.25 73.71 47.69 41.67 61.86 217.84 72.17 99.02 307.02 201.25 204.73 130.53 190.31 17.69 115.18 9.14 26.27 11.27 28 ER4a ExonRegion 0 78.21 44.32 48.42 25.54 68.41 70.34 83.18 66.30 49.66 71.12 226.31 111.47 52.17 332.11 225.18 245.56 170.08 189.94 37.10 111.32 15.92 31.21 15.44 29 E4_Da KnownBoundary 0 120.84 74.99 71.26 47.85 172.67 120.84 176.52 91.27 58.91 85.42 324.98 233.48 120.12 417.86 348.60 384.94 237.96 289.97 88.57 126.62 22.86 53.89 43.19 30 ER4b ExonRegion 0 111.48 58.99 52.96 31.59 121.29 92.01 108.47 76.36 46.55 58.47 191.10 240.65 75.44 226.72 201.01 162.46 134.30 87.09 33.77 75.11 8.26 27.79 8.89 31 IG24 Intergenic 0 4.69 1.13 2.02 0.00 4.45 8.13 1.47 0.00 0.00 0.95 5.36 26.87 0.00 4.02 16.27 1.65 0.00 3.05 1.77 4.72 0.00 0.00 0.00 32 IG24_AR1 ActiveIntergenicRegion 0 4.74 1.14 2.05 0.00 4.50 8.22 1.48 0.00 0.00 0.96 5.42 27.17 0.00 4.05 16.45 1.67 0.00 3.09 1.79 4.77 0.00 0.00 0.00