Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 APOBEC2 Gene 0 16.18 7.36 4.83 7.43 12.62 2.16 7.32 7.96 5.61 14.81 2.83 3.83 1.91 2.33 3.81 4.47 1.34 3.06 6.74 5.19 1.08 1.10 2.27 2 426505 Transcript 0 1.04 0.50 0.00 0.96 1.31 0.00 0.41 0.71 0.43 1.45 0.00 0.58 0.00 0.00 0.00 0.11 1.62 0.20 2.34 0.52 0.51 0.51 0.11 3 244669 Transcript 0 13.45 7.18 4.44 7.17 14.70 1.79 7.51 8.39 4.96 17.38 2.31 2.97 1.99 1.82 3.78 4.64 1.32 2.20 5.56 4.92 0.91 0.84 1.76 4 ER1a ExonRegion 0 2.08 1.00 0.00 1.91 2.62 0.00 0.81 1.41 0.86 2.90 0.00 1.17 0.00 0.00 0.00 0.23 3.24 0.39 4.69 1.04 1.02 1.02 0.23 5 E1_Ab KnownBoundary 0 0.00 3.03 0.00 3.53 0.00 0.00 1.90 3.82 2.37 2.82 0.00 12.60 0.00 0.00 0.00 3.25 0.00 2.16 0.00 0.00 6.30 0.00 3.24 6 ER1b ExonRegion 0 1.48 0.01 0.54 1.24 1.57 0.54 2.34 0.67 1.11 5.74 2.27 8.71 0.00 1.58 0.08 1.61 0.97 3.80 0.93 1.87 1.33 1.22 0.83 7 E1a_E2a KnownJunction 0 3.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 Ix_SR3 SilentIntronRegion 0 16.56 10.06 3.47 12.08 17.13 2.79 12.61 6.94 7.46 7.41 3.55 5.52 6.45 3.62 4.53 3.96 5.28 1.75 7.03 6.61 0.50 2.85 0.89 9 Ix_AR3 ActiveIntronRegion 0 13.92 3.53 5.70 9.16 14.85 1.91 4.13 6.26 2.55 4.15 2.01 3.71 1.34 2.78 7.52 7.22 1.15 3.83 17.68 4.43 0.00 1.45 2.04 10 E2_Aa NovelBoundary 0 32.08 2.83 17.18 7.86 43.80 13.23 12.32 6.53 5.35 1.24 5.11 0.00 6.82 4.94 4.45 0.00 9.54 0.00 4.14 0.00 2.97 3.06 4.35 11 ER2a ExonRegion 0 19.53 4.97 0.28 1.77 14.56 3.46 11.76 4.68 2.94 11.75 5.89 4.12 0.00 3.38 6.09 0.00 2.65 1.45 9.14 2.23 0.69 0.00 2.21 12 E2_Da KnownBoundary 0 51.19 15.33 1.21 5.46 28.18 5.68 12.10 10.15 8.42 13.51 4.69 12.60 0.00 4.94 5.19 0.00 0.00 2.53 12.80 8.63 3.09 0.00 0.00 13 E2a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER2b ExonRegion 0 22.49 8.74 2.89 4.45 8.03 0.65 10.00 6.83 6.26 15.42 3.09 2.51 0.00 0.93 5.40 4.83 3.18 1.74 8.54 6.12 1.71 0.97 2.14 15 E2_Ab KnownBoundary 0 39.86 5.59 6.98 5.43 12.22 0.00 16.87 10.76 9.87 24.85 0.00 5.70 0.00 2.47 0.00 7.60 0.00 2.03 16.57 2.43 0.00 0.00 4.35 16 ER2c ExonRegion 0 34.49 5.18 2.85 7.53 9.90 1.15 4.93 7.56 9.57 15.76 3.45 2.14 0.98 1.49 5.88 4.49 0.86 4.08 8.82 6.57 0.00 1.60 3.24 17 E2_Db KnownBoundary 0 33.93 11.45 1.77 18.25 20.88 2.90 9.80 4.76 8.36 9.67 0.00 0.00 0.00 2.41 5.44 8.20 0.00 6.67 0.00 11.12 0.00 0.00 0.00 18 ER2d ExonRegion 0 16.58 6.38 4.91 14.65 27.67 2.63 10.85 10.15 7.42 21.58 3.50 7.58 5.00 2.64 6.30 8.21 1.71 3.97 5.01 7.48 0.00 1.62 1.62 19 E2_Dc NovelBoundary 0 20.00 9.08 1.36 29.30 36.50 2.50 19.83 11.71 2.46 5.35 2.53 12.60 6.66 5.18 10.63 7.60 9.54 4.27 3.95 9.33 0.00 0.00 0.00 20 E2c_E3a KnownJunction 0 0.00 0.00 0.00 0.00 8.23 0.00 0.00 3.94 0.00 14.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 21 Ix Intron 0 19.35 10.33 6.90 14.06 18.96 3.21 12.51 12.05 6.30 9.61 1.55 4.89 5.45 2.13 5.45 3.58 2.81 1.37 10.54 6.68 0.05 1.97 1.18 22 Ix_SR1 SilentIntronRegion 0 18.29 8.52 3.66 16.17 22.58 4.90 12.24 12.86 5.93 10.33 2.70 6.82 6.69 2.93 4.95 3.20 2.51 1.53 12.31 5.43 0.00 2.96 0.74 23 Ix_AR2 ActiveIntronRegion 0 15.35 9.23 5.65 16.23 15.38 3.35 16.91 19.26 8.65 14.05 1.05 5.76 2.24 2.22 7.54 2.50 3.21 0.84 14.30 15.38 0.00 1.07 1.69 24 Ix_AR3 ActiveIntronRegion 0 7.30 13.78 6.59 23.07 17.39 4.40 28.00 6.18 6.95 18.81 3.00 11.69 0.00 1.71 10.52 6.17 2.97 1.85 15.69 12.93 0.00 1.04 0.51 25 Ix_AR4 ActiveIntronRegion 0 8.47 16.52 6.13 18.57 17.39 1.83 5.46 6.48 4.94 15.05 0.00 0.00 0.00 3.25 11.61 5.94 6.60 1.85 16.72 14.10 0.00 2.08 2.94 26 Ix_SR2 SilentIntronRegion 0 23.78 10.75 7.70 13.49 19.61 2.78 13.10 9.89 7.46 13.27 1.23 6.72 7.24 2.04 5.84 4.26 2.57 1.43 13.90 4.78 0.00 3.60 1.18 27 Ix_AR5 ActiveIntronRegion 0 18.82 7.82 6.91 12.23 20.80 1.78 10.75 10.62 6.06 4.91 0.61 2.15 5.75 0.83 4.47 3.82 3.59 1.01 5.04 4.83 0.00 1.44 1.26 28 Ix_AR6 ActiveIntronRegion 0 23.15 23.16 9.91 10.28 10.48 4.23 9.15 12.54 4.06 8.40 1.65 1.94 3.85 1.68 6.96 2.90 2.16 1.40 8.17 6.36 0.00 0.00 0.00 29 Ix_SR3 SilentIntronRegion 0 10.79 27.45 8.95 9.13 5.35 2.93 12.05 10.54 6.05 6.31 3.87 7.79 4.69 1.62 2.90 0.30 0.00 3.70 1.91 4.26 0.00 0.00 0.00 30 Ix_AR7 ActiveIntronRegion 0 25.90 14.39 20.66 12.74 12.16 1.28 12.53 9.17 4.42 8.24 1.66 3.24 4.37 5.45 3.66 5.10 1.41 2.98 13.65 7.72 0.94 0.00 3.78 31 E3_Aa NovelBoundary 0 27.12 11.51 7.07 13.45 8.66 0.00 4.06 6.94 7.26 13.54 2.26 0.00 21.75 2.47 8.90 0.00 0.00 4.44 18.26 8.69 5.44 0.00 0.00 32 ER3a ExonRegion 0 14.74 13.61 9.97 9.56 14.86 3.87 9.20 12.63 6.16 18.24 2.64 1.77 2.94 3.70 3.41 5.53 0.41 3.08 8.70 6.07 1.91 0.78 3.28