Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MDFI Gene 0 9.58 0.25 21.19 3.16 5.30 3.89 3.26 8.64 3.39 7.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.80 1.48 0.52 2.23 32.09 31.34 2 432027 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 419164 Transcript 0 2.31 0.00 9.00 0.00 1.26 0.00 1.14 2.69 1.09 1.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.61 3.73 4 373051 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 441667 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.15 6 230321 Transcript 0 0.00 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.06 0.00 0.00 0.00 0.89 0.00 7 373050 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 446650 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 435476 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 471092 Transcript 0 3.16 0.00 0.71 0.00 0.51 1.04 1.00 1.47 0.46 2.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.72 8.78 11 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E1a_E4f KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER2a ExonRegion 0 0.00 0.00 0.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.43 14 E2_Ab KnownBoundary 0 3.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.10 15 ER2b ExonRegion 0 2.09 0.00 3.01 0.00 1.32 0.00 0.66 0.64 0.02 0.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.93 4.05 16 E2a_E3a KnownJunction 0 0.00 0.00 7.78 0.00 0.00 0.00 0.00 0.00 0.00 1.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.51 0.00 17 E2a_E4f KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER3a ExonRegion 0 1.89 0.00 15.20 0.00 1.58 0.00 0.25 2.67 1.44 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.67 5.11 19 E3a_E4f KnownJunction 0 7.33 0.00 13.01 0.00 3.48 0.00 4.33 8.09 2.92 4.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.27 8.37 20 ER4a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.29 21 E4_Ac NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 2.25 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.56 3.12 58.90 22 ER4b ExonRegion 0 11.22 0.00 3.47 0.82 4.46 4.95 3.22 1.38 0.04 1.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.16 2.12 0.00 0.07 26.25 62.94 23 E4_Da KnownBoundary 0 14.82 0.00 3.61 0.00 0.00 5.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.80 0.00 0.00 61.54 81.78 24 E4a_E4f KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 E4_Ad KnownBoundary 0 43.19 0.00 9.02 1.93 12.48 22.43 6.49 4.52 0.00 6.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.14 4.80 2.68 3.15 66.07 93.81 26 ER4c ExonRegion 0 30.16 0.00 8.58 1.36 8.03 17.42 6.79 1.73 1.24 3.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.70 6.37 0.00 2.20 76.05 126.28 27 ER4d ExonRegion 0 40.06 0.00 9.80 1.36 8.03 18.60 7.94 1.73 1.24 3.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.36 6.37 0.00 2.20 86.61 160.26 28 E4_Ae KnownBoundary 0 17.34 0.00 10.44 1.80 3.65 13.51 8.48 0.00 0.00 1.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.57 0.00 0.00 2.97 20.94 36.54 29 ER4e ExonRegion 0 34.17 0.00 11.60 1.36 4.78 18.93 8.79 1.73 1.24 4.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.54 4.32 0.00 3.62 70.99 110.54 30 ER4f ExonRegion 0 3.95 0.00 6.65 1.86 0.79 3.34 1.35 0.73 3.14 5.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.96 0.00 0.00 0.85 15.45 16.92 31 E4_Db KnownBoundary 0 0.00 0.00 5.06 0.00 0.00 0.00 0.00 0.00 0.00 3.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.66 3.06 0.00 32 E4b_E4f KnownJunction 0 6.96 0.00 11.95 0.00 0.00 0.00 0.00 4.44 5.06 5.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.45 0.00 0.00 0.00 47.82 24.16 33 ER4g ExonRegion 0 0.22 0.00 4.70 2.21 0.09 0.00 0.20 1.03 0.07 3.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 1.01 4.96 5.54 34 E4_Af KnownBoundary 0 0.00 0.00 7.30 0.00 0.00 0.00 1.77 4.35 0.00 2.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.88 0.00 35 ER4h ExonRegion 0 14.74 0.00 29.94 1.13 4.04 1.60 8.70 11.72 5.60 12.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.23 3.78 0.00 1.33 71.78 101.66 36 E4c_E5a KnownJunction 0 0.00 0.00 29.60 2.06 4.07 8.63 7.86 5.83 0.00 13.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.32 0.00 0.00 0.00 35.76 38.24 37 E4c_E6a KnownJunction 0 0.00 0.00 3.40 1.83 0.00 0.00 0.00 0.00 1.56 1.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.53 0.00 38 ER5a ExonRegion 0 11.42 0.00 41.78 5.06 13.50 15.68 8.79 13.87 2.39 14.39 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.82 2.99 0.00 5.36 32.80 39.68 39 E5_Ab KnownBoundary 0 30.82 0.00 56.06 5.36 12.05 24.82 8.61 31.87 1.27 15.66 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.15 9.60 0.00 7.35 34.78 50.19 40 ER5b ExonRegion 0 19.13 0.00 59.54 7.47 10.75 6.76 7.11 32.30 8.85 18.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.88 12.74 1.65 7.63 87.16 94.52 41 E5a_E6a KnownJunction 0 25.56 0.00 74.13 14.65 20.97 0.00 4.37 32.24 15.16 23.99 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.37 4.71 6.33 7.10 202.74 104.48 42 ER6a ExonRegion 0 21.47 1.51 69.08 12.58 13.46 1.73 3.10 26.27 14.36 26.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.50 4.19 3.65 9.51 161.68 81.05 43 E6_Da KnownBoundary 0 41.27 3.35 71.02 13.35 7.47 2.78 2.08 29.16 12.88 33.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.01 4.80 0.00 16.80 101.22 56.34 44 ER6b ExonRegion 0 15.38 0.56 50.74 7.33 1.43 3.67 4.32 22.55 7.73 24.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.40 3.93 1.21 5.63 47.37 48.45 45 E6_Db KnownBoundary 0 23.12 0.00 53.75 5.29 3.74 0.00 6.54 36.15 6.11 15.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.42 0.00 3.15 65.46 65.81 46 ER6c ExonRegion 0 47.83 0.00 71.02 13.19 18.36 13.48 8.10 40.53 14.77 25.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.71 7.26 2.17 6.30 128.51 84.31 47 E6_Dc KnownBoundary 0 2.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.59 2.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.90 11.52 48 E6c_E7a KnownJunction 0 10.08 0.00 56.68 17.48 19.95 16.30 6.18 29.82 10.62 25.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.39 4.14 0.00 5.31 39.50 71.96 49 ER6d ExonRegion 0 3.16 0.00 0.71 0.00 0.51 1.04 1.00 1.47 0.46 2.46 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.72 8.78 50 ER7a ExonRegion 0 6.13 0.00 35.96 8.78 13.87 5.15 5.72 18.44 6.85 15.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.29 2.38 0.86 4.25 47.03 27.29 51 E7_Da KnownBoundary 0 9.93 0.00 29.83 14.08 0.00 2.90 6.54 24.93 7.55 14.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.48 0.00 0.00 10.87 80.71 59.67 52 E7_Db KnownBoundary 0 24.89 5.39 54.46 9.62 0.00 2.90 1.72 21.85 4.75 7.28 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.30 0.00 3.13 3.15 54.38 50.62 53 ER7b ExonRegion 0 12.56 1.36 56.29 15.95 0.00 2.93 2.78 24.89 6.71 15.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.39 0.00 2.34 9.11 77.37 44.83 54 ER7c ExonRegion 0 19.24 4.86 57.03 11.36 0.00 6.04 1.81 19.88 5.24 16.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.76 1.83 0.71 1.67 52.47 51.83 55 E7_Dc KnownBoundary 0 20.60 0.00 37.11 6.46 0.00 0.00 2.25 10.60 6.22 17.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.80 0.00 0.00 60.31 63.77 56 ER7d ExonRegion 0 8.81 0.07 29.31 2.46 2.94 1.73 2.03 11.20 5.67 13.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.96 2.04 1.76 2.03 28.44 31.56 57 E7_Dd KnownBoundary 0 23.04 0.00 67.59 7.29 12.05 0.00 7.51 13.35 7.44 10.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.37 0.00 2.62 0.00 46.48 41.49 58 ER7e ExonRegion 0 9.98 0.35 15.61 2.36 8.07 4.21 3.97 5.69 2.82 4.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.73 0.27 0.58 2.44 31.07 30.18 59 ER7f ExonRegion 0 0.00 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.06 0.00 0.00 0.00 0.89 0.00