Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SRPK1 Gene 0 99.01 281.85 162.29 133.52 233.97 214.22 176.17 139.57 109.40 176.38 371.49 344.19 235.95 294.34 176.84 208.18 272.60 163.41 136.19 217.54 92.19 109.94 89.26 2 361690 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 373825 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 373822 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 423325 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 373821 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 346162 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER1b ExonRegion 0 12.49 32.88 4.51 3.78 28.10 67.82 41.80 5.50 4.13 13.39 51.15 0.00 4.65 41.54 32.37 46.22 60.23 36.00 24.90 46.64 35.28 9.50 21.12 10 E1_Ac NovelBoundary 0 11.34 46.70 4.23 5.16 30.05 53.61 39.92 4.31 2.95 10.91 35.59 0.00 5.68 17.13 27.44 36.49 36.56 33.87 28.24 50.17 34.53 11.82 16.13 11 E1a_E1e KnownJunction 1 162.84 331.32 52.72 52.37 341.85 530.89 417.43 68.84 60.68 152.01 721.24 19.21 20.13 446.00 192.60 592.49 750.54 434.89 232.67 484.81 314.76 71.77 281.87 12 ER1c ExonRegion 1 86.31 187.32 34.31 29.53 189.38 337.83 244.49 37.64 34.58 96.21 439.20 1.44 9.38 307.14 186.00 314.05 452.96 253.96 153.25 312.76 212.29 35.19 160.54 13 ER1d ExonRegion 1 106.00 254.71 41.76 36.80 245.28 405.73 293.81 53.87 52.60 110.49 611.12 6.13 12.12 426.06 188.82 470.83 591.14 326.28 186.34 390.96 271.97 60.94 229.79 14 ER1e ExonRegion 0 0.20 0.77 1.02 0.08 0.80 0.92 0.85 0.95 0.81 1.72 6.84 0.37 1.15 3.18 1.50 4.06 3.70 4.81 2.59 3.20 1.85 0.75 2.98 15 E1_Ae KnownBoundary 0 0.00 0.00 4.52 0.00 3.99 6.98 0.00 2.18 3.33 5.83 13.11 0.00 0.00 4.89 5.19 4.10 4.77 12.60 0.00 3.26 5.37 0.00 4.35 16 ER1f ExonRegion 1 50.76 161.53 50.24 34.59 126.07 195.48 141.47 52.78 67.00 100.77 418.99 28.79 25.25 213.92 85.39 343.97 337.74 302.26 112.39 223.12 160.65 54.45 143.46 17 E1b_E2a KnownJunction 0 6.67 18.35 27.05 14.82 22.33 47.42 26.90 19.02 42.79 34.46 101.76 85.23 46.10 56.04 62.80 82.12 92.94 97.71 33.41 96.39 51.95 24.00 30.56 18 ER2a ExonRegion 1 8.31 19.50 50.19 35.78 38.16 24.30 31.15 62.06 60.63 117.09 516.80 203.56 92.82 232.55 126.95 143.19 398.10 157.76 102.57 278.26 171.91 52.84 65.52 19 E2a_E3a KnownJunction 0 3.78 20.59 69.96 66.62 28.61 44.69 61.47 89.29 99.51 155.24 414.26 412.48 199.66 511.27 237.96 457.66 292.57 317.41 248.10 385.68 65.05 111.69 196.93 20 ER3a ExonRegion 0 18.56 84.94 72.60 74.83 170.27 218.31 141.06 89.69 86.82 161.77 443.06 431.40 239.79 346.85 152.12 314.28 329.82 273.65 145.68 325.73 65.67 96.01 124.69 21 E3a_E4a KnownJunction 1 24.37 178.46 80.16 77.18 287.44 352.81 259.19 105.68 79.89 156.90 565.99 448.95 319.95 284.24 149.70 128.60 363.91 105.46 127.63 308.78 46.21 112.49 43.96 22 ER4a ExonRegion 0 47.04 215.37 89.87 76.21 172.52 194.30 191.34 100.29 89.59 172.99 585.67 646.27 373.02 300.24 158.48 166.84 396.60 121.76 119.70 286.51 77.53 121.18 61.04 23 E4a_E5a KnownJunction 0 85.87 282.98 102.51 74.15 102.21 112.15 87.84 95.21 90.39 197.97 551.98 752.95 493.47 449.53 145.62 247.97 391.30 144.34 182.31 264.04 99.46 120.08 62.32 24 ER5a ExonRegion 0 59.79 166.68 102.64 86.09 90.67 81.10 85.44 93.00 90.21 173.27 549.95 667.77 403.98 373.05 139.99 204.87 367.97 129.43 120.50 262.43 61.05 134.17 64.04 25 E5a_E6a KnownJunction 1 78.31 142.08 83.26 110.38 123.68 144.18 96.14 94.68 91.81 148.90 574.09 823.62 411.99 371.83 100.50 200.55 350.91 106.91 117.37 270.37 90.38 162.21 80.50 26 I5_AR1 ActiveIntronRegion 0 18.16 16.46 29.54 23.68 61.18 19.57 65.94 27.80 24.56 32.23 9.39 20.12 36.03 4.06 28.05 43.33 31.47 17.49 28.01 62.70 2.95 1.09 13.28 27 I5_AR2 ActiveIntronRegion 1 23.28 8.32 23.66 23.38 14.88 2.35 19.82 28.03 18.45 23.94 9.66 10.42 22.42 6.24 39.98 32.97 28.78 20.27 19.41 29.79 2.82 5.27 16.43 28 ER6a ExonRegion 1 48.76 149.44 103.68 84.66 140.44 147.39 110.73 92.63 99.64 168.02 498.49 702.63 474.04 372.83 103.88 232.94 336.17 192.93 132.83 245.55 75.15 125.79 93.53 29 E6a_E7a KnownJunction 1 32.60 203.85 83.41 59.40 174.02 193.47 97.91 86.05 65.31 159.88 495.97 551.73 600.61 385.96 101.00 247.37 383.64 155.53 58.26 185.74 98.47 99.08 77.08 30 I6_AR1 ActiveIntronRegion 0 10.64 17.19 19.68 14.18 17.77 12.78 37.37 17.85 16.78 17.36 11.17 21.61 32.94 6.44 14.01 20.72 21.50 11.77 11.90 34.04 1.47 3.15 8.13 31 ER7a ExonRegion 0 39.36 186.61 120.26 73.37 170.14 169.11 150.92 97.94 77.28 139.63 405.49 593.01 390.88 401.37 118.03 223.91 369.16 217.80 129.41 244.69 141.37 90.61 86.79 32 E7a_E8a KnownJunction 1 27.63 154.91 100.53 53.11 99.83 122.49 72.16 94.72 61.49 111.10 300.23 491.11 239.92 357.53 102.23 223.02 276.39 232.18 115.30 196.86 146.84 68.89 110.72 33 E8a_E9a KnownJunction 1 22.15 212.73 119.16 62.23 138.88 142.47 139.33 85.23 53.85 104.30 263.54 624.50 372.87 488.97 202.61 266.17 290.04 141.73 143.16 220.45 109.28 134.16 130.18 34 ER8a ExonRegion 1 25.81 184.20 127.96 73.96 115.06 129.49 102.25 110.16 64.89 130.70 322.72 586.81 309.72 428.02 144.50 277.32 313.46 227.34 137.58 234.04 142.56 112.03 134.29 35 ER9a ExonRegion 0 78.00 266.63 163.36 102.97 257.61 218.50 204.25 125.54 90.07 152.33 452.70 579.60 459.23 465.33 149.62 308.20 483.10 225.98 152.99 276.01 140.67 115.62 118.08 36 E9a_E10a KnownJunction 1 78.09 251.73 98.99 69.16 182.60 211.36 152.18 106.75 96.76 149.14 397.05 537.18 560.35 388.14 186.66 308.30 374.47 174.77 124.14 264.23 139.68 141.76 110.20 37 ER10a ExonRegion 0 54.50 235.39 113.58 107.48 214.52 257.38 205.26 121.03 122.93 198.48 590.39 703.85 648.33 514.98 174.48 352.13 466.89 301.73 213.40 355.42 163.59 151.70 149.72 38 E10a_E11a KnownJunction 0 62.46 205.62 88.94 104.45 254.67 277.17 246.30 122.44 110.73 232.33 655.22 834.72 654.50 580.20 206.32 416.30 489.85 364.58 270.50 318.12 205.60 151.92 138.80 39 ER11a ExonRegion 0 42.76 200.08 97.69 100.24 243.74 241.29 208.98 122.03 117.40 208.65 629.57 672.17 440.43 500.97 164.75 342.13 440.84 379.69 199.48 303.97 194.60 106.37 130.77 40 E11a_E12a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 E11b_E12a KnownJunction 0 50.45 265.68 116.17 105.55 243.12 227.09 213.57 127.08 128.64 238.59 688.28 404.98 369.29 506.39 177.27 409.29 487.24 362.34 271.25 275.16 227.96 121.55 156.56 42 ER11b ExonRegion 0 40.92 224.37 100.07 94.49 199.79 202.33 183.15 114.08 123.92 222.50 675.87 417.07 325.18 479.12 189.55 377.46 466.53 378.79 259.08 276.59 222.57 113.20 170.33 43 ER12a ExonRegion 0 80.58 275.38 114.32 105.23 195.85 234.20 186.63 116.33 115.59 216.75 593.06 566.00 427.10 528.46 169.67 350.96 416.71 355.04 237.55 318.22 189.46 135.35 165.21 44 E12a_E13a KnownJunction 0 59.64 343.95 86.87 95.49 166.13 264.22 195.77 100.43 88.54 201.57 449.01 553.08 247.06 401.73 178.13 257.80 330.81 306.26 221.09 271.97 173.59 92.71 102.61 45 I12_AR1 ActiveIntronRegion 0 13.83 22.14 10.54 18.41 22.22 9.66 35.94 10.83 11.09 8.66 11.55 34.18 31.05 10.10 14.39 27.55 30.93 20.25 14.20 21.12 7.47 5.59 11.60 46 I12_SR2 SilentIntronRegion 0 5.40 26.27 7.97 9.51 14.20 7.02 24.49 10.48 13.08 9.43 9.92 35.47 51.23 5.80 9.05 17.70 21.98 11.09 10.10 23.51 4.83 6.10 12.20 47 I12_AR2 ActiveIntronRegion 0 11.54 23.40 9.47 18.21 27.21 10.70 35.28 20.65 20.42 14.41 24.99 41.55 47.81 10.84 14.09 36.11 36.85 44.62 22.06 32.39 10.33 6.92 19.48 48 I12_SR3 SilentIntronRegion 0 5.43 15.91 17.17 27.58 62.22 52.61 26.82 36.90 36.29 18.90 7.14 9.37 14.78 7.23 6.56 14.32 13.66 16.18 10.82 11.38 4.48 2.19 5.53 49 I12_AR3 ActiveIntronRegion 0 6.75 10.37 16.93 55.98 56.87 37.06 18.22 48.44 45.16 22.97 3.51 20.19 18.63 7.57 3.38 8.21 12.24 9.39 21.89 13.73 4.09 1.93 8.12 50 E13_Aa NovelBoundary 0 10.82 75.45 30.28 40.32 196.18 146.56 68.05 86.13 56.68 27.05 4.69 0.00 0.00 14.77 0.00 8.37 8.70 5.80 34.35 14.57 3.03 2.76 7.60 51 ER13a ExonRegion 0 48.14 248.59 82.17 81.85 280.00 318.43 197.06 87.83 93.57 185.49 494.30 461.95 258.15 406.24 160.73 273.22 364.61 306.17 179.34 230.46 157.94 90.45 110.42 52 E13_Da NovelBoundary 0 7.33 39.34 43.85 76.55 153.99 211.98 87.13 63.46 74.65 44.64 22.90 43.21 42.04 7.24 19.90 20.08 43.67 17.04 43.11 10.35 20.70 5.27 12.21 53 E13a_E14a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54 E13a_E15a KnownJunction 0 78.24 237.79 95.65 72.45 245.59 266.83 167.02 104.37 89.64 184.57 417.53 435.59 228.72 393.43 137.59 259.33 363.35 325.66 160.66 254.58 167.11 123.51 111.06 55 E13a_E16a NovelJunction 0 0.00 0.00 0.00 2.06 0.00 0.00 0.00 1.77 1.10 2.87 12.90 0.00 0.00 2.83 4.82 0.00 4.02 2.16 0.00 6.20 2.97 0.00 3.67 56 I13 Intron 0 9.12 34.80 24.51 58.05 68.57 44.21 39.85 51.74 57.39 27.57 26.11 35.58 49.53 23.41 11.18 27.35 31.88 19.41 10.74 20.24 6.01 9.76 8.86 57 I13_AR1 ActiveIntronRegion 0 11.68 34.93 30.21 76.85 80.60 49.68 34.39 69.15 72.09 32.91 18.75 39.35 26.23 16.47 9.61 19.96 25.75 13.83 11.58 15.01 1.68 11.84 6.73 58 I13_SR1 SilentIntronRegion 0 9.06 40.73 28.27 62.78 75.17 47.17 43.70 53.60 58.37 27.92 26.11 40.05 58.08 22.43 10.89 28.78 30.88 20.37 9.21 21.14 6.57 9.44 9.75 59 I13_AR3 ActiveIntronRegion 0 4.04 9.73 8.00 10.13 26.44 22.46 19.86 28.40 33.66 14.99 20.32 7.54 15.11 23.83 7.42 18.94 21.83 15.85 8.26 12.11 7.36 7.84 6.36 60 I13_SR2 SilentIntronRegion 0 16.33 28.27 13.68 50.99 76.75 38.78 57.22 37.54 55.44 29.65 37.63 21.29 31.66 37.68 12.52 50.48 53.20 26.58 27.02 27.13 9.29 9.90 2.06 61 I13_AR4 ActiveIntronRegion 0 10.10 19.76 11.09 52.78 49.46 41.47 35.57 47.53 60.13 31.96 38.76 31.39 55.08 35.94 18.85 29.38 51.94 21.80 19.55 26.93 5.34 12.10 9.67 62 E14_Aa NovelBoundary 0 24.30 28.02 7.30 68.62 44.74 66.61 67.52 44.69 66.87 45.88 46.64 12.15 49.51 42.32 18.42 13.59 65.54 17.08 20.42 42.12 2.59 19.29 28.34 63 ER14a ExonRegion 0 9.83 15.63 4.91 16.30 35.39 20.68 23.82 10.04 27.07 9.64 19.10 31.33 35.70 17.34 9.08 21.41 25.77 10.69 0.07 15.12 2.77 4.62 3.25 64 E14_Da NovelBoundary 0 14.00 21.90 38.05 67.06 113.33 69.11 71.28 38.36 48.18 32.10 45.85 61.82 67.20 21.25 20.64 30.33 51.33 40.04 4.52 32.79 5.00 8.08 12.89 65 E14a_E16a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 66 I14 Intron 0 6.85 16.25 12.86 30.53 34.12 26.55 26.22 30.88 29.07 19.19 40.45 35.43 45.05 23.18 11.46 23.75 27.64 19.41 9.09 15.39 3.77 11.50 10.62 67 I14_AR1 ActiveIntronRegion 0 6.90 16.38 12.95 30.76 34.36 26.75 26.41 31.11 29.29 19.33 40.74 35.69 45.37 23.35 11.55 23.93 27.83 19.55 9.16 15.49 3.79 11.58 10.69 68 E15_Aa NovelBoundary 0 7.48 35.85 10.61 36.83 171.22 72.74 54.41 43.09 35.53 24.04 49.59 25.21 50.32 22.07 8.90 39.82 28.89 17.82 17.69 20.45 6.30 4.71 3.41 69 ER15a ExonRegion 0 57.65 219.50 97.49 71.53 222.84 249.87 143.59 105.90 105.79 191.24 424.18 453.38 274.04 470.44 176.76 374.49 368.42 327.01 207.46 267.81 156.51 162.11 152.67 70 E15_Da NovelBoundary 1 14.00 48.68 42.93 51.64 135.40 79.33 119.02 37.99 43.87 20.95 44.48 55.82 109.57 48.86 15.08 48.62 57.13 25.33 13.84 38.99 12.36 13.90 16.30 71 E15a_E16a KnownJunction 0 32.67 206.54 109.99 88.47 254.67 295.51 216.88 102.69 107.03 257.47 492.12 443.84 186.84 607.63 232.03 522.00 444.79 375.77 323.77 264.74 146.41 234.77 237.14 72 I15 Intron 0 15.17 41.85 22.60 42.33 49.01 34.08 36.99 37.50 42.67 29.14 35.47 33.58 43.01 29.11 17.62 31.44 27.58 14.03 11.60 23.97 5.23 18.52 9.56 73 I15_SR1 SilentIntronRegion 0 3.41 16.77 10.47 25.81 40.69 29.87 31.99 18.46 24.37 18.06 24.90 22.44 27.15 27.54 16.39 19.76 24.26 13.50 10.26 17.90 4.73 8.96 9.98 74 I15_AR1 ActiveIntronRegion 0 6.98 27.59 15.98 26.02 38.36 29.78 30.41 24.83 26.15 16.48 25.99 22.94 49.49 20.27 11.72 24.08 22.59 11.78 11.32 18.09 3.08 17.44 5.59 75 I15_SR2 SilentIntronRegion 0 27.23 63.51 33.64 59.45 60.72 37.34 43.56 56.66 63.07 41.08 43.52 42.50 46.99 36.34 21.85 38.76 30.96 13.07 12.98 29.89 5.75 24.50 10.93 76 I15_AR2 ActiveIntronRegion 0 17.94 55.72 25.72 63.16 54.44 45.68 43.28 42.11 53.33 47.17 59.24 58.74 42.46 31.53 22.44 53.63 38.59 28.17 9.81 33.18 11.90 19.07 16.50 77 E16_Aa NovelBoundary 1 35.78 48.48 43.70 102.35 68.85 46.28 80.77 94.31 79.69 81.23 88.39 69.17 53.41 63.57 31.15 99.03 37.49 90.99 38.87 31.06 28.66 18.00 44.22 78 ER16a ExonRegion 0 162.56 424.44 251.52 207.28 334.68 280.38 233.77 206.38 149.40 231.54 373.08 289.18 177.00 284.40 246.56 205.28 248.16 140.26 152.57 223.70 81.11 136.49 91.90