Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 BAK1 Gene 0 33.62 9.68 20.64 9.75 13.09 18.19 12.84 17.61 13.73 17.18 77.64 15.49 7.73 73.67 83.03 71.91 56.48 19.66 17.58 11.55 28.15 16.06 24.93 2 442998 Transcript 0 10.33 10.17 9.43 3.17 8.98 21.06 7.77 6.98 6.89 7.49 11.17 10.48 16.11 11.88 17.22 10.91 19.41 9.92 8.42 6.75 0.87 2.03 1.08 3 360661 Transcript 0 3.28 0.82 5.03 1.44 1.27 2.23 2.19 3.11 2.19 3.96 13.55 2.53 0.98 14.47 14.23 10.44 7.21 1.99 2.65 0.75 4.30 2.67 3.86 4 374460 Transcript 0 0.63 0.00 0.49 0.00 0.00 0.00 0.00 0.00 0.49 0.46 0.00 0.00 0.00 0.00 0.00 0.89 0.00 1.11 0.00 0.00 0.00 0.00 0.59 5 374467 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 ER1a ExonRegion 0 16.04 0.94 0.49 0.63 1.70 12.41 6.93 1.50 0.33 0.44 15.02 0.00 4.15 26.86 30.07 23.55 18.79 1.85 4.96 1.76 11.70 5.25 6.49 7 E1_Ab KnownBoundary 0 53.49 8.09 2.63 1.76 11.54 46.90 24.73 2.55 2.46 2.12 47.96 0.00 0.00 114.60 98.52 85.11 49.46 3.77 15.91 3.00 33.98 12.74 23.39 8 ER1b ExonRegion 0 40.51 19.94 14.40 8.96 21.15 41.73 19.42 19.67 14.76 14.07 90.46 6.90 10.05 94.61 97.69 80.14 82.26 22.68 27.67 16.60 48.09 29.12 41.53 9 E1a_E2a KnownJunction 1 20.00 27.96 41.28 21.44 14.43 23.74 20.45 40.42 25.40 25.55 160.30 6.15 8.28 156.04 181.96 188.41 136.04 46.97 36.52 23.59 57.89 76.36 68.46 10 E2_Aa NovelBoundary 0 9.71 5.26 3.67 0.00 10.19 5.51 7.46 1.81 1.79 0.00 54.96 17.86 0.00 21.31 0.00 56.05 18.70 0.00 11.29 5.11 14.83 8.02 13.66 11 ER2a ExonRegion 0 10.79 8.01 35.75 21.63 11.63 15.49 14.16 32.02 29.59 21.69 108.51 12.43 5.62 129.56 172.81 126.74 76.12 39.92 51.34 20.27 55.64 30.43 40.47 12 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E2a_E3b KnownJunction 0 6.45 0.00 40.89 23.47 26.66 50.71 36.74 41.32 29.17 28.31 55.80 33.46 5.68 154.87 163.17 69.13 52.83 31.92 36.61 19.30 32.80 29.94 10.59 14 ER3a ExonRegion 0 0.30 0.00 6.65 3.50 1.53 4.98 4.54 3.95 3.71 5.73 7.18 1.24 0.67 17.40 18.65 7.22 8.96 2.38 3.19 1.52 4.09 3.27 1.26 15 ER3b ExonRegion 0 9.99 7.88 42.89 16.38 14.13 67.13 32.50 26.71 29.57 27.40 116.16 20.16 11.43 128.15 129.06 86.10 121.72 12.07 15.43 18.05 49.14 23.41 25.56 16 E3_Da KnownBoundary 0 34.90 38.15 36.37 34.00 19.78 27.48 11.22 40.83 34.55 30.62 176.68 42.46 11.85 139.09 123.00 121.68 107.90 33.78 27.20 34.83 63.20 33.13 24.24 17 E3a_E3c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18 ER3c ExonRegion 0 37.82 19.80 36.52 13.05 10.75 13.56 12.81 32.95 28.33 43.58 133.50 21.43 10.53 116.40 158.14 100.37 96.97 29.93 37.86 17.72 64.41 30.40 30.86 19 E3b_E4a KnownJunction 0 53.42 5.26 63.63 24.31 18.51 20.05 21.46 54.46 25.03 63.02 103.92 29.41 13.15 81.64 168.37 132.36 106.03 43.19 34.26 20.01 47.57 33.92 47.04 20 ER3d ExonRegion 0 37.04 7.73 53.18 15.81 9.63 12.47 17.34 34.57 22.85 57.00 94.13 19.48 12.66 89.16 142.74 105.51 88.79 43.24 35.36 14.26 41.65 27.92 39.94 21 ER4a ExonRegion 0 46.11 9.08 54.50 19.38 20.11 16.06 16.71 36.78 24.69 50.23 189.77 46.84 20.75 165.05 217.05 161.65 153.65 44.04 40.02 24.54 60.11 32.35 54.43 22 E4_Da KnownBoundary 0 10.00 12.17 19.46 8.02 16.04 8.29 11.79 12.24 9.23 15.98 18.79 37.66 6.17 14.24 27.81 19.40 25.99 33.87 0.00 12.91 5.68 3.12 6.91 23 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 E4a_E5b KnownJunction 0 58.16 9.41 30.01 22.14 18.85 18.57 12.81 32.04 18.43 16.84 197.89 55.67 28.24 174.82 235.61 141.42 125.67 25.29 44.24 5.43 65.61 35.09 90.91 25 ER4b ExonRegion 0 10.33 10.17 9.43 3.17 8.98 21.06 7.77 6.98 6.89 7.49 11.17 10.48 16.11 11.88 17.22 10.91 19.41 9.92 8.42 6.75 0.87 2.03 1.08 26 E4_Db NovelBoundary 1 13.78 11.71 27.65 6.99 16.13 46.28 1.85 12.08 12.15 10.72 23.64 0.00 6.82 25.90 8.90 40.50 4.77 15.09 9.22 10.93 6.30 5.33 16.56 27 I4 Intron 0 17.67 9.89 18.65 6.83 10.93 13.44 6.60 12.22 11.39 11.29 19.86 13.57 9.61 19.23 18.87 25.71 12.49 15.40 10.33 8.05 3.97 5.64 6.70 28 I4_AR1 ActiveIntronRegion 0 15.23 12.41 16.84 5.40 10.88 18.07 6.21 7.65 9.21 11.49 12.11 9.96 7.86 23.29 23.55 21.84 12.39 13.65 11.46 7.66 3.10 5.54 5.97 29 I4_SR1 SilentIntronRegion 0 19.57 14.38 25.92 10.82 17.34 16.23 8.43 20.75 19.87 16.13 30.59 24.52 12.19 20.66 20.92 32.86 18.50 15.75 12.39 11.30 4.97 10.36 8.15 30 I4_AR2 ActiveIntronRegion 0 38.41 16.47 17.22 12.74 15.65 7.24 8.41 14.35 11.30 11.99 41.46 16.88 9.38 22.01 30.90 28.24 17.99 22.73 10.19 8.30 9.37 11.25 9.84 31 I4_SR2 SilentIntronRegion 0 17.69 3.19 15.37 5.06 5.83 6.52 5.57 10.89 7.49 7.40 19.18 9.21 9.74 13.42 11.23 24.68 7.72 16.72 7.55 6.06 3.86 1.78 6.27 32 E5_Aa NovelBoundary 0 10.89 3.35 2.99 0.00 4.33 0.00 4.15 9.12 6.19 3.57 8.48 0.00 6.66 0.00 0.00 16.24 4.68 14.72 0.00 3.26 0.00 2.33 0.00 33 E5_Ab NovelBoundary 0 7.56 3.03 13.69 6.09 4.33 11.58 1.68 6.98 2.81 7.98 7.11 0.00 0.00 4.94 0.00 8.12 4.21 14.88 0.00 3.07 0.00 0.00 4.27 34 ER5a ExonRegion 0 6.65 0.87 11.55 3.12 3.44 2.88 5.30 5.19 2.65 6.88 28.72 7.42 4.02 25.99 29.01 21.23 16.98 2.64 6.37 0.30 8.50 3.87 10.91 35 ER5b ExonRegion 0 41.00 4.93 52.95 13.49 20.42 21.59 18.42 31.98 22.88 36.93 206.29 44.69 19.05 168.30 191.10 180.84 128.72 39.18 34.53 22.13 59.08 36.22 62.58 36 E5_Da NovelBoundary 0 6.52 0.00 22.68 11.29 12.99 19.08 0.00 16.55 10.94 4.75 9.21 0.00 0.00 12.01 22.75 27.94 4.49 27.15 3.76 2.88 8.34 3.12 4.01 37 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 E5a_E6b KnownJunction 0 40.82 5.79 35.48 15.82 19.69 26.52 24.29 43.42 36.89 41.88 172.10 34.06 0.00 158.93 126.83 146.20 63.11 38.26 39.34 17.45 52.76 43.78 45.33 39 E6_Aa NovelBoundary 0 3.70 0.00 5.80 0.00 26.57 0.00 3.84 1.64 0.00 2.71 9.58 0.00 0.00 4.71 4.70 4.19 3.74 8.25 0.00 3.26 3.09 2.76 0.00 40 ER6a ExonRegion 0 12.70 4.07 11.95 2.04 2.68 5.50 3.31 9.51 6.79 9.46 45.42 6.49 1.17 43.45 37.72 34.18 17.33 6.93 6.37 2.66 13.22 8.85 11.01 41 ER6b ExonRegion 0 46.60 23.86 52.15 28.84 23.77 27.97 23.42 40.83 34.86 36.13 204.29 32.89 16.10 176.48 172.32 143.69 115.47 35.94 19.66 22.18 68.23 30.01 61.90 42 E6_Da KnownBoundary 0 100.61 47.62 65.25 46.75 58.49 70.30 83.73 68.27 34.14 58.21 267.28 75.02 26.46 262.35 178.75 300.01 172.42 66.45 40.19 47.30 83.46 44.58 71.79 43 ER6c ExonRegion 0 34.34 7.71 8.92 6.07 10.07 11.38 9.14 10.09 7.51 8.50 33.86 8.58 3.06 34.52 35.68 38.46 23.03 11.86 8.21 6.31 10.80 7.05 11.03 44 ER6d ExonRegion 0 1.27 0.00 0.98 0.00 0.00 0.00 0.00 0.00 0.99 0.92 0.00 0.00 0.00 0.00 0.00 1.78 0.00 2.22 0.00 0.00 0.00 0.00 1.17