Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GUSBL1 Gene 0 45.04 121.23 63.73 99.81 58.11 22.75 58.93 69.57 42.15 43.11 14.59 14.56 16.57 17.53 21.60 31.49 30.99 47.94 36.67 63.01 23.24 7.96 14.99 2 479900 Transcript 0 3.77 3.95 6.27 6.94 0.42 3.68 3.31 5.17 5.01 5.15 4.19 6.89 3.43 5.26 4.96 4.29 4.62 5.41 9.97 10.94 5.82 3.91 1.72 3 466668 Transcript 0 3.45 1.28 1.83 3.48 3.82 0.00 1.13 6.63 5.16 5.04 5.79 6.23 0.00 10.39 7.05 8.59 2.38 1.29 2.31 2.52 1.42 1.56 3.80 4 487022 Transcript 0 0.00 4.47 5.29 5.64 0.00 0.00 1.83 3.27 1.69 2.85 1.18 0.00 0.00 1.15 0.00 0.00 1.82 0.00 0.00 2.52 0.00 0.00 0.00 5 463434 Transcript 0 108.37 302.69 124.83 212.82 151.80 47.55 144.90 135.20 84.55 86.62 24.89 24.63 35.90 32.19 50.27 64.28 66.56 98.40 70.81 129.74 44.40 16.79 30.89 6 492832 Transcript 0 6.45 7.19 5.21 4.20 1.97 2.55 4.71 2.41 1.43 3.02 1.25 1.84 0.29 1.60 2.22 0.95 1.82 3.38 3.01 3.93 0.90 0.18 1.65 7 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.05 0.00 0.93 0.00 0.42 0.43 0.00 0.00 0.49 0.00 1.89 0.00 0.00 1.42 0.00 0.00 0.00 0.00 8 E1_Ab KnownBoundary 0 0.00 0.00 3.34 3.83 3.14 5.34 1.68 12.86 9.23 8.86 0.00 0.00 0.00 0.00 0.00 7.60 0.00 4.89 3.95 2.88 2.29 0.00 0.00 9 E1_Ac KnownBoundary 0 0.00 5.39 2.99 3.06 3.82 2.78 0.00 13.35 10.39 7.12 7.21 0.00 6.17 0.00 0.00 3.93 4.21 10.99 0.00 0.00 0.00 0.00 0.00 10 ER1b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 3.67 0.00 3.46 0.00 1.15 1.93 0.00 0.00 4.87 0.00 2.97 0.00 0.00 3.19 0.00 0.00 0.00 0.00 11 ER1c ExonRegion 0 0.00 0.20 0.00 0.00 0.00 1.15 0.00 4.02 3.03 2.95 3.49 0.00 0.00 1.80 0.00 0.29 3.11 0.00 0.69 0.79 1.10 0.00 0.00 12 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER2a ExonRegion 0 2.80 1.18 1.36 2.34 2.57 0.00 0.09 10.39 4.96 6.96 5.09 2.98 0.32 3.75 4.00 3.37 1.65 1.02 0.77 2.82 1.07 0.84 2.58 15 E2a_E3a KnownJunction 0 6.89 2.57 3.67 6.96 7.64 0.00 2.25 13.27 10.33 10.07 11.58 12.45 0.00 20.78 14.09 17.17 4.77 2.57 4.61 5.05 2.84 3.12 7.60 16 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 Ix_AR1 ActiveIntronRegion 0 8.50 33.48 7.44 17.35 7.42 0.48 11.37 7.23 4.65 8.80 1.28 1.59 4.28 0.00 3.64 2.21 0.98 1.09 5.92 9.49 0.33 0.00 0.00 18 ER3a ExonRegion 0 3.42 2.51 2.38 3.01 2.44 0.00 1.32 15.91 9.41 7.76 12.45 4.20 4.69 9.17 3.07 10.49 3.40 1.85 6.18 1.44 0.97 1.29 3.20 19 E3_Da NovelBoundary 0 0.00 0.00 1.24 0.00 7.30 0.00 7.15 0.00 1.65 0.00 2.16 12.60 8.12 0.00 0.00 0.00 0.00 0.00 13.93 0.00 0.00 0.00 0.00 20 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.61 0.00 0.00 0.00 0.00 21 ER4a ExonRegion 0 0.00 0.23 0.08 0.56 0.00 0.00 0.25 6.89 2.12 0.73 1.53 0.00 0.89 0.00 0.00 0.00 1.89 0.03 0.91 1.52 0.00 0.00 0.00 22 E4_Ab KnownBoundary 0 10.37 18.88 2.75 11.35 7.39 18.00 23.54 41.57 7.03 25.98 5.37 0.00 0.00 0.00 0.00 19.05 4.77 26.32 4.80 5.94 0.00 0.00 0.00 23 ER4b ExonRegion 0 0.00 0.00 1.00 0.29 0.00 1.01 0.00 5.74 3.39 4.30 5.13 0.00 0.61 3.35 2.00 1.63 0.00 2.05 0.69 1.17 0.00 0.76 0.88 24 E4a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 Ix_SR3 SilentIntronRegion 0 3.07 7.43 3.36 6.73 3.25 1.20 20.65 4.29 4.49 4.44 1.14 9.16 13.59 1.26 1.62 5.09 6.29 2.25 4.94 26.72 0.52 1.49 1.57 26 Ix_AR4 ActiveIntronRegion 0 1.80 4.83 2.08 2.73 6.49 0.00 15.52 0.65 0.00 1.26 2.80 21.00 6.80 0.00 4.06 5.13 4.54 0.00 3.98 13.51 0.00 0.00 0.00 27 Ix_AR2 ActiveIntronRegion 0 0.92 2.03 2.78 2.09 0.00 0.00 2.96 0.00 0.00 1.11 0.32 2.16 9.07 0.54 5.32 0.00 0.00 1.29 0.00 18.09 2.20 0.00 2.94 28 ER5a ExonRegion 0 0.00 0.00 0.00 1.36 0.00 0.00 0.00 5.19 1.24 1.15 0.97 0.00 2.35 3.25 1.45 0.00 0.00 0.92 3.19 0.00 0.00 1.04 1.47 29 ER5b ExonRegion 0 2.77 8.12 1.54 1.47 0.00 0.32 2.19 2.80 0.30 0.54 0.60 0.98 0.96 0.65 1.00 2.92 0.00 0.55 2.24 0.00 2.42 0.18 0.35 30 E5_Da NovelBoundary 0 0.00 8.95 34.77 31.40 35.40 10.22 27.43 20.82 12.56 33.42 7.05 6.00 0.00 0.00 0.00 0.00 8.32 18.07 12.24 25.69 5.37 2.39 4.27 31 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 32 E5b_E7b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33 ER5c ExonRegion 0 16.93 18.30 0.00 1.36 0.00 3.67 13.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 E6_Aa NovelBoundary 0 85.57 36.18 66.64 65.09 16.64 7.89 75.78 46.37 35.82 47.95 0.00 0.00 0.00 7.00 4.45 12.22 8.42 88.50 17.98 38.16 14.39 0.00 19.21 35 ER6a ExonRegion 0 0.20 0.14 1.11 0.53 0.22 3.43 0.20 0.20 2.24 1.31 0.11 0.00 0.00 0.88 1.81 0.10 2.17 1.35 2.02 0.28 0.16 0.00 0.00 36 E6_Da NovelBoundary 0 2.96 0.00 8.84 10.12 0.00 0.00 0.00 0.00 1.10 1.64 0.00 0.00 0.00 0.00 0.00 4.19 0.00 0.00 0.00 2.68 0.00 0.00 11.10 37 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 E7_Aa NovelBoundary 0 33.56 42.82 61.12 44.18 11.21 7.10 18.72 39.06 39.18 54.07 4.74 0.00 20.45 0.00 15.08 12.05 4.68 64.58 11.58 35.92 26.19 0.00 0.00 39 ER7a ExonRegion 0 16.23 12.20 3.68 12.72 10.70 6.72 12.36 6.91 3.71 12.62 5.80 0.00 0.00 3.25 11.61 3.96 6.60 11.09 9.56 10.64 6.61 0.00 0.00 40 ER7b ExonRegion 0 25.79 37.82 7.11 11.73 6.30 12.52 21.07 7.84 3.33 12.78 3.28 0.00 0.00 2.44 5.02 6.05 3.86 11.42 10.49 7.21 7.66 0.00 0.00 41 E7_Da NovelBoundary 0 0.00 0.00 4.14 9.26 0.00 0.00 0.00 2.22 4.08 5.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27.40 3.48 2.88 0.00 0.00 0.00 42 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 E7b_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 44 ER7c ExonRegion 0 28.57 34.57 2.45 0.00 5.35 5.50 9.27 1.73 2.47 1.15 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.70 3.19 0.00 0.00 0.00 0.00 45 ER8a ExonRegion 0 31.36 63.60 13.18 6.37 9.75 7.39 26.80 1.63 2.90 4.21 3.10 0.96 2.30 2.07 1.39 4.19 1.72 19.71 5.87 8.62 1.07 0.26 2.75 46 E8a_E9a KnownJunction 0 19.11 14.27 15.35 5.39 0.00 0.00 0.00 4.56 1.79 3.84 0.00 0.00 0.00 2.47 0.00 0.00 3.83 3.73 4.24 8.18 0.00 0.00 0.00 47 E8b_E9b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48 E8_Dc NovelBoundary 0 0.00 5.26 58.13 87.37 0.00 0.00 0.00 34.87 41.52 51.95 0.00 5.85 0.00 0.00 0.00 3.59 0.00 97.08 3.67 2.88 2.35 0.00 0.00 49 ER8b ExonRegion 0 16.93 30.00 21.14 4.77 0.00 5.50 19.86 3.46 8.65 3.44 5.80 8.66 0.00 4.87 0.00 8.92 9.08 12.47 9.56 17.02 2.20 2.08 5.87 50 ER8c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 E9_Aa NovelBoundary 0 26.82 86.63 17.15 47.41 23.09 8.18 13.73 28.26 19.33 24.01 2.00 7.35 0.00 4.36 0.00 0.00 0.00 14.05 13.46 21.60 5.75 0.00 8.02 52 ER9a ExonRegion 0 16.09 30.91 21.57 13.63 4.82 10.27 25.16 2.42 2.47 5.28 3.09 14.72 0.00 2.92 2.90 3.57 1.98 9.98 5.10 12.34 0.44 0.42 11.75 53 ER9b ExonRegion 0 32.36 179.62 99.32 146.60 65.17 17.40 66.34 97.09 59.63 65.03 18.41 20.94 13.83 19.93 24.56 46.65 33.35 51.15 53.73 91.88 30.48 10.34 20.47 54 E9_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 55 E9a_E9c KnownJunction 0 0.00 8.95 10.59 11.29 0.00 0.00 3.67 6.53 3.39 5.69 2.37 0.00 0.00 2.30 0.00 0.00 3.65 0.00 0.00 5.05 0.00 0.00 0.00 56 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 57 ER9c ExonRegion 0 69.20 304.94 182.80 261.89 88.38 24.41 83.94 148.98 99.86 111.80 15.10 31.49 18.03 19.44 26.41 49.11 52.25 101.63 70.55 130.50 43.56 9.65 31.20 58 E9_Db KnownBoundary 0 83.42 347.96 125.57 226.34 92.36 35.32 139.25 118.58 74.51 75.16 9.90 12.00 28.08 10.24 33.13 41.95 26.09 63.01 21.55 93.64 33.79 8.14 63.25 59 ER9d ExonRegion 0 85.27 366.33 113.95 219.16 121.86 20.90 117.19 93.60 79.13 87.71 13.33 16.19 22.73 14.96 36.03 40.42 53.95 74.91 55.13 111.60 30.96 11.65 22.86 60 E9_Ac KnownBoundary 0 56.08 106.23 93.05 104.65 38.62 14.48 29.72 54.22 51.10 27.59 18.53 31.51 21.26 17.13 36.22 20.76 25.34 47.84 25.60 127.64 6.12 5.27 54.72 61 ER9e ExonRegion 0 58.85 220.55 197.46 355.33 80.71 40.80 82.27 244.97 154.60 137.92 46.87 33.18 43.54 55.61 41.34 84.58 105.34 139.73 122.53 197.39 74.61 20.27 42.04 62 E9_Dc KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 63 E9c_E10a NovelJunction 0 5.85 17.76 11.77 20.44 21.05 8.35 18.64 16.02 7.09 28.21 19.32 7.35 6.98 18.66 13.97 4.27 12.81 14.34 9.60 28.06 11.12 2.57 11.01 64 ER9f ExonRegion 0 131.48 239.04 135.71 206.47 181.74 74.20 172.61 176.81 89.96 85.53 36.44 33.06 49.07 49.43 64.51 88.14 79.16 121.89 86.50 147.88 57.84 21.93 38.93 65 E9_Dd NovelBoundary 0 89.35 85.91 96.68 150.30 74.70 51.79 126.00 100.84 52.29 62.59 12.95 12.15 40.42 30.96 14.22 27.94 24.59 46.80 74.07 22.50 21.93 7.84 19.46 66 Ix Intron 0 15.46 24.08 22.93 43.91 26.15 12.90 48.88 19.04 16.21 16.90 9.95 28.52 37.73 12.69 7.73 10.68 13.87 9.28 13.74 37.54 4.55 9.88 6.66 67 Ix_SR3 SilentIntronRegion 0 29.43 39.42 46.01 79.10 48.84 20.32 77.03 31.84 23.10 23.70 9.66 22.25 27.81 13.46 11.06 15.34 17.99 14.28 20.77 43.11 5.98 5.43 7.25 68 Ix_AR2 ActiveIntronRegion 0 5.99 18.21 15.47 37.18 14.72 11.26 30.91 13.75 13.10 13.52 5.71 28.22 46.15 7.57 3.76 7.23 4.43 1.92 8.63 31.11 2.14 8.92 3.73 69 Ix_SR2 SilentIntronRegion 0 4.81 8.34 3.06 10.34 8.15 4.00 22.40 3.77 6.44 7.87 8.10 23.99 26.21 8.22 3.05 3.98 10.08 3.53 4.86 23.28 2.56 7.44 3.91 70 Ix_AR1 ActiveIntronRegion 0 5.78 15.09 9.93 27.12 16.07 13.03 46.57 20.29 20.84 20.76 18.19 49.46 63.25 20.84 10.06 12.46 19.35 13.54 15.03 53.27 7.16 21.73 13.12 71 Ix_SR1 SilentIntronRegion 0 24.91 33.91 10.75 14.94 10.50 3.60 27.27 7.56 4.51 5.87 6.64 28.35 57.09 17.90 10.21 13.12 12.95 8.56 15.62 31.30 2.16 19.41 2.88 72 ER10a ExonRegion 0 6.23 12.36 19.19 26.57 1.07 19.28 15.08 8.87 17.06 20.94 13.61 25.50 20.27 15.26 10.74 8.85 13.67 14.40 8.98 29.27 16.26 6.00 5.46 73 E10_Da NovelBoundary 0 38.90 67.62 44.20 76.91 30.73 42.31 71.37 61.49 45.14 41.02 53.70 82.38 97.72 56.27 84.18 40.76 85.37 57.70 44.14 145.35 36.82 20.02 20.06 74 E10a_E11a KnownJunction 0 8.89 2.89 9.58 5.96 0.00 0.00 2.25 12.40 7.20 2.18 2.47 6.30 0.00 9.54 14.09 10.94 4.58 10.28 27.48 14.00 10.87 11.02 4.27 75 Ix Intron 0 41.62 36.24 7.84 16.22 21.37 17.96 38.22 4.75 7.93 9.45 17.82 22.38 52.61 26.12 31.67 5.48 16.23 13.58 19.57 44.48 6.80 6.40 18.01 76 Ix_SR1 SilentIntronRegion 0 41.62 36.24 7.84 16.22 21.37 17.96 38.22 4.75 7.93 9.45 17.82 22.38 52.61 26.12 31.67 5.48 16.23 13.58 19.57 44.48 6.80 6.40 18.01 77 ER11a ExonRegion 0 7.50 8.43 8.86 9.09 1.42 1.78 2.51 8.79 5.79 7.35 8.64 9.56 0.29 6.26 4.93 4.09 9.46 7.78 21.97 22.36 7.76 6.45 0.58 78 IG33_SR3 SilentIntergenicRegion 0 5.74 8.64 11.48 16.56 3.35 1.19 6.83 4.84 5.22 7.03 5.60 14.88 16.09 4.20 1.89 4.26 6.90 5.10 5.00 16.18 5.81 4.36 3.68