Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF187 Gene 0 94.03 131.16 61.50 134.89 140.58 202.24 72.89 105.27 94.80 79.98 36.09 46.18 36.11 46.54 39.42 36.57 44.44 82.21 65.26 66.48 50.49 54.91 63.80 2 316606 Transcript 0 38.94 49.98 26.72 51.49 72.45 103.60 33.64 39.18 41.75 31.37 20.56 17.27 11.24 20.00 16.79 22.82 23.22 35.43 37.09 32.87 38.26 21.56 29.32 3 421553 Transcript 0 19.24 39.70 29.92 76.59 41.74 95.55 27.73 54.68 61.68 48.68 20.40 10.27 9.15 37.85 18.41 23.00 33.62 111.69 49.63 67.67 61.86 28.52 55.27 4 423234 Transcript 0 10.49 25.95 10.73 34.58 27.79 87.77 20.52 18.49 20.45 28.67 9.51 2.16 1.56 6.77 1.45 7.91 16.63 29.38 12.74 23.15 28.18 7.77 13.46 5 437778 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 IG6_AR1 ActiveIntergenicRegion 0 0.91 5.26 1.35 1.11 14.04 11.79 1.33 5.32 21.49 2.46 0.00 0.00 1.11 0.00 0.00 0.00 0.00 1.65 0.57 1.11 0.63 2.05 1.26 7 ER1a ExonRegion 0 21.97 22.07 7.96 11.80 39.06 109.27 25.30 8.12 11.53 7.56 11.23 0.08 0.97 14.18 7.57 13.67 15.39 17.69 21.69 27.23 20.45 10.36 21.69 8 E1_Da NovelBoundary 0 6.82 36.31 10.59 12.92 14.43 94.38 11.70 13.88 13.95 17.46 0.00 0.00 0.00 16.19 0.00 4.19 7.48 51.03 23.62 24.54 9.02 4.96 46.69 9 E1a_E2a KnownJunction 0 35.64 27.63 25.84 44.55 87.27 132.65 38.33 44.03 49.36 38.73 17.16 5.70 0.00 16.60 8.90 42.21 33.94 64.13 61.27 49.28 66.72 26.51 44.90 10 I1_AR3 ActiveIntronRegion 1 4.73 19.68 6.78 20.41 24.88 55.30 27.11 20.12 15.07 18.45 0.71 9.67 17.56 10.16 3.94 5.53 2.46 14.71 7.11 13.46 4.92 6.98 9.84 11 E2_Aa NovelBoundary 0 23.78 34.99 9.49 55.97 47.54 82.96 32.46 27.56 41.29 28.80 2.11 20.71 12.34 12.18 15.08 4.36 4.11 34.86 17.60 20.20 9.20 2.88 15.02 12 ER2a ExonRegion 0 15.32 23.04 12.22 26.00 52.28 67.08 28.12 27.37 33.18 28.95 18.58 14.99 11.69 23.20 11.35 21.12 25.72 42.06 36.61 26.45 40.29 14.58 25.20 13 E2_Ab NovelBoundary 0 14.08 23.09 19.16 43.22 28.78 50.88 13.60 38.32 32.52 36.48 22.27 6.30 0.00 25.25 0.00 11.02 7.95 32.91 13.18 36.11 36.02 13.84 25.69 14 E2_Da NovelBoundary 0 14.37 31.51 37.43 55.84 31.75 52.92 38.20 53.15 51.82 43.30 18.58 6.30 13.47 16.83 5.69 19.91 19.92 54.47 9.51 36.62 59.74 8.70 19.12 15 E2a_E3a KnownJunction 0 6.52 0.00 12.98 5.13 7.47 7.55 0.00 7.11 8.77 1.42 27.06 6.75 0.00 5.47 6.30 8.12 4.68 1.82 0.00 0.00 27.68 0.00 3.76 16 ER2b ExonRegion 0 7.41 11.18 14.53 25.89 16.05 31.17 15.41 19.26 26.82 15.81 39.21 7.42 10.72 22.16 6.22 15.29 21.69 22.04 8.19 27.66 45.18 9.23 18.88 17 ER2c ExonRegion 0 19.24 39.70 29.92 76.59 41.74 95.55 27.73 54.68 61.68 48.68 20.40 10.27 9.15 37.85 18.41 23.00 33.62 111.69 49.63 67.67 61.86 28.52 55.27 18 E2_Ac KnownBoundary 0 36.82 18.15 50.18 103.15 91.60 212.43 51.71 77.30 94.10 75.48 20.95 12.00 6.82 58.74 17.31 39.48 24.78 141.40 59.95 88.21 56.84 24.13 69.31 19 ER2d ExonRegion 1 27.81 31.74 39.26 89.36 84.73 167.49 57.55 64.09 70.14 58.22 8.94 13.33 7.91 43.18 15.59 22.55 24.98 121.52 47.16 67.54 46.84 27.62 50.10 20 E2_Db KnownBoundary 0 10.59 9.74 2.96 27.50 32.51 84.38 29.15 16.72 12.07 20.47 4.90 0.00 0.00 2.83 0.00 4.27 8.42 31.50 8.66 17.26 2.90 0.00 8.11 21 E2b_E2e KnownJunction 0 10.67 18.75 12.12 50.11 8.15 67.46 27.25 28.34 37.76 38.36 2.42 0.00 0.00 5.47 0.00 4.10 4.30 43.11 13.55 15.15 5.87 0.00 4.10 22 E2_Ae KnownBoundary 0 6.59 21.58 12.86 17.05 4.16 51.56 19.74 4.35 14.21 18.08 5.16 0.00 0.00 2.47 5.44 4.19 13.28 16.29 4.71 9.01 19.89 5.94 4.27 23 ER2e ExonRegion 1 19.32 43.77 24.19 70.57 44.09 179.15 45.24 42.08 44.57 47.47 12.61 0.94 5.51 20.62 3.66 9.56 31.72 77.53 39.47 49.12 47.33 14.22 24.51 24 ER2f ExonRegion 0 17.64 46.77 20.01 65.87 40.14 168.10 41.04 32.26 34.58 49.32 14.17 4.33 3.13 13.53 2.90 11.89 29.71 54.82 25.48 40.43 44.81 9.72 19.58 25 ER2g ExonRegion 1 47.46 60.18 25.30 65.72 59.55 127.83 38.24 55.83 62.52 52.21 17.39 8.68 12.31 46.80 17.59 19.96 26.02 91.58 36.62 59.60 52.91 26.54 45.58 26 E2c_E3a KnownJunction 0 3.33 5.13 1.45 3.30 15.45 7.44 0.00 4.72 6.31 8.03 4.84 0.00 0.00 0.00 0.00 3.93 3.55 3.94 0.00 5.88 11.55 5.82 7.34 27 E2_Dd NovelBoundary 0 20.15 20.59 7.30 16.48 40.83 32.20 14.40 25.67 21.96 10.05 6.90 18.46 0.00 2.41 4.45 7.26 16.64 21.93 9.04 16.75 0.00 5.57 4.35 28 E2d_E3a KnownJunction 0 13.34 21.58 14.93 45.98 42.19 60.02 26.45 26.00 23.90 50.39 7.90 6.30 0.00 32.08 13.97 4.36 16.64 38.43 40.94 33.24 44.54 10.53 31.93 29 ER2h ExonRegion 0 15.52 24.40 12.66 49.06 40.14 53.79 19.86 31.69 24.70 48.93 7.73 4.33 0.00 30.86 18.37 12.88 16.50 47.43 49.90 29.08 38.20 13.89 33.28 30 I2 Intron 0 28.78 38.66 20.04 51.14 58.29 87.57 26.60 50.56 38.10 27.99 6.57 16.69 16.84 20.63 7.97 12.85 25.01 42.59 31.01 22.02 12.26 18.35 29.94 31 I2_AR1 ActiveIntronRegion 0 28.95 38.87 20.16 51.44 58.65 88.11 26.75 50.86 38.33 28.16 6.61 16.79 16.93 20.75 8.01 12.93 25.16 42.84 31.20 22.15 12.34 18.47 30.13 32 E3_Aa NovelBoundary 1 106.02 65.38 26.34 48.84 121.39 140.77 88.28 63.42 60.73 36.99 0.00 64.82 40.26 46.91 30.53 3.85 15.80 41.41 4.33 37.58 10.75 11.51 31.07 33 ER3a ExonRegion 0 43.30 65.21 37.70 80.94 87.94 139.48 39.74 69.94 72.91 67.02 39.76 22.12 29.53 58.03 27.83 43.57 49.57 103.25 55.31 68.86 76.40 43.67 66.25 34 E3a_E4a KnownJunction 0 66.16 62.69 34.68 122.40 121.90 112.66 38.73 83.63 82.61 69.04 28.01 31.96 39.93 68.22 24.11 55.46 29.08 114.33 74.73 60.34 45.53 45.01 79.05 35 I3_AR1 ActiveIntronRegion 0 0.00 9.07 2.33 3.87 5.12 11.69 1.69 0.00 2.35 1.09 4.93 1.95 7.39 10.21 4.46 0.00 6.31 0.00 2.03 6.78 7.02 1.33 7.49 36 I3_AR2 ActiveIntronRegion 0 8.67 11.54 10.35 17.96 24.15 12.80 15.76 23.23 24.83 15.10 8.81 15.02 13.61 6.04 3.00 9.13 11.37 10.78 7.41 18.61 4.10 17.06 12.57 37 E4_Aa NovelBoundary 0 16.30 15.13 35.72 15.65 19.61 20.05 24.51 20.74 23.29 15.34 4.42 24.46 6.49 7.00 0.00 12.13 8.79 7.67 26.17 12.40 11.92 19.17 4.10 38 ER4a ExonRegion 0 125.68 155.46 79.87 164.58 173.73 280.26 103.89 156.48 123.40 115.41 59.97 63.71 49.72 64.16 48.15 58.68 68.90 127.03 88.76 86.64 70.22 81.14 99.13 39 E4_Da KnownBoundary 0 148.40 207.86 136.33 233.04 245.50 306.41 97.60 144.91 138.05 121.04 61.07 76.83 57.79 64.63 90.61 55.63 46.19 83.86 84.05 91.40 95.20 84.81 81.86 40 ER4b ExonRegion 0 115.26 177.18 74.61 169.97 176.18 201.42 76.42 109.26 105.90 80.19 28.77 58.84 43.53 40.54 49.86 29.00 36.37 51.43 65.87 61.37 36.19 56.34 51.05