Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 BTN2A1 Gene 0 160.55 55.08 105.56 62.79 77.01 123.98 51.71 96.44 93.42 62.64 88.15 46.07 45.76 102.52 75.34 96.01 98.06 97.70 50.04 65.83 76.77 97.06 81.01 2 377600 Transcript 0 50.39 1.10 9.01 5.69 18.55 12.10 10.31 14.03 16.64 7.97 23.02 12.25 19.64 34.75 12.45 37.00 40.72 15.19 7.23 9.74 30.14 17.79 21.20 3 312541 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 493173 Transcript 1 0.00 3.09 8.40 6.83 8.66 0.00 2.25 7.23 9.58 13.97 35.27 0.00 0.00 24.43 0.00 0.00 33.47 20.44 8.85 30.23 16.80 14.08 8.45 5 265424 Transcript 0 0.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 429381 Transcript 0 83.05 28.63 53.62 34.17 50.09 73.14 41.00 38.34 40.31 30.19 48.42 26.67 30.14 59.56 32.33 56.22 69.98 54.17 28.56 32.85 29.29 41.16 28.47 7 469185 Transcript 0 1.93 0.58 0.06 0.03 1.34 0.02 0.03 4.00 0.54 0.49 3.48 5.68 0.06 2.19 4.42 4.35 0.50 0.49 1.59 1.09 0.00 0.00 0.29 8 480218 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 1.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.97 3.30 0.00 0.00 0.00 0.00 0.00 1.47 10 ER1b ExonRegion 0 11.43 6.91 1.37 0.60 5.24 3.89 6.04 0.97 0.59 1.28 8.89 0.00 0.00 18.77 6.61 26.99 10.96 7.98 5.73 3.49 4.23 7.92 23.85 11 E1_Ad KnownBoundary 0 3.78 6.25 1.83 0.00 3.82 2.84 0.00 0.00 1.10 0.00 2.68 0.00 0.00 11.71 4.45 12.30 8.23 0.00 9.60 3.26 3.15 3.12 19.97 12 E1_Ae KnownBoundary 0 64.46 18.68 3.61 10.82 19.52 42.99 22.83 4.03 4.14 6.63 21.27 0.00 0.00 26.84 9.64 36.49 42.45 33.08 42.54 17.39 23.78 30.68 39.69 13 ER1c ExonRegion 0 49.64 14.79 2.45 5.70 13.62 17.17 17.57 1.89 2.58 2.92 23.19 0.00 0.00 53.30 29.28 62.41 35.11 21.84 29.83 14.12 16.83 20.84 60.07 14 ER1d ExonRegion 1 65.31 19.46 4.55 9.73 24.08 41.39 29.51 6.17 5.82 4.26 35.34 0.00 1.34 71.00 39.79 77.70 48.57 34.32 51.88 19.15 36.83 32.74 84.74 15 ER1e ExonRegion 1 74.08 29.56 44.52 26.11 49.13 146.02 50.04 61.30 77.44 44.59 121.63 24.86 19.16 83.91 35.82 100.47 166.16 113.48 90.34 63.46 137.88 106.61 123.47 16 E1a_E2a KnownJunction 1 51.34 2.96 67.41 44.02 60.02 49.74 6.62 99.15 116.72 55.60 191.68 61.97 34.09 94.89 50.81 88.10 214.03 79.92 72.28 71.52 151.60 71.58 123.35 17 E1a_E3a KnownJunction 1 0.00 3.09 8.40 6.83 8.66 0.00 2.25 7.23 9.58 13.97 35.27 0.00 0.00 24.43 0.00 0.00 33.47 20.44 8.85 30.23 16.80 14.08 8.45 18 ER2a ExonRegion 0 32.67 6.43 65.21 26.45 31.03 43.47 6.87 78.71 84.42 40.09 75.14 38.35 24.54 120.24 77.38 137.59 97.88 170.45 122.61 80.47 80.24 164.23 163.43 19 E2a_E3a KnownJunction 0 50.38 5.66 48.96 19.88 76.23 104.83 13.56 73.77 56.22 24.04 45.49 36.16 6.17 73.99 72.69 42.04 47.03 128.88 31.91 42.38 91.06 39.92 42.60 20 ER3a ExonRegion 0 71.02 37.10 73.90 35.25 49.52 136.09 44.82 76.16 86.66 53.80 78.54 47.65 30.81 110.40 52.02 85.20 110.28 111.75 45.82 83.83 95.58 78.89 84.65 21 E3a_E4a KnownJunction 0 44.53 2.50 9.46 4.49 7.98 18.00 8.61 11.25 19.59 8.22 20.22 17.11 19.97 40.67 13.97 23.33 29.64 17.74 4.42 12.08 41.82 13.96 18.27 22 E3a_E5a KnownJunction 0 17.78 21.71 47.49 38.92 24.19 98.58 24.78 47.69 73.35 48.65 45.59 20.26 12.82 54.98 23.49 34.95 50.02 83.82 4.05 64.43 53.75 57.01 67.78 23 I3 Intron 0 25.46 4.28 8.39 6.26 16.35 12.88 11.22 9.32 7.80 4.41 21.42 17.91 19.64 25.75 14.35 25.89 26.31 6.51 5.95 6.88 13.71 13.83 14.27 24 I3_SR1 SilentIntronRegion 0 19.54 4.08 6.26 1.51 10.59 11.66 3.32 0.33 5.66 2.27 13.82 5.16 5.35 18.27 12.38 31.16 23.41 5.62 6.74 5.87 11.28 6.58 21.71 25 I3_AR2 ActiveIntronRegion 0 16.05 2.61 6.71 6.08 12.94 10.58 9.52 7.27 6.16 3.60 18.81 20.85 32.01 27.96 16.04 19.29 21.73 5.92 2.70 8.01 10.67 10.50 12.92 26 I3_SR2 SilentIntronRegion 1 21.27 8.01 10.24 6.22 18.35 5.53 3.83 4.57 7.19 3.47 30.17 12.78 9.84 24.02 15.66 37.75 34.80 3.63 4.23 8.55 21.71 9.83 12.43 27 I3_AR3 ActiveIntronRegion 0 27.17 3.68 8.76 6.96 19.60 11.64 16.68 8.27 8.47 5.71 22.42 17.05 16.67 29.38 14.92 27.82 26.29 9.54 6.32 4.05 15.10 15.47 11.27 28 I3_SR3 SilentIntronRegion 0 35.58 5.19 9.65 7.10 17.94 18.53 12.88 15.57 9.56 5.00 22.45 20.73 17.43 23.80 12.67 26.09 28.99 5.91 9.03 7.84 13.73 18.69 16.92 29 E4_Aa NovelBoundary 1 81.79 16.71 16.59 10.39 16.38 5.79 20.62 15.77 16.64 4.38 12.74 29.71 45.45 37.61 21.14 48.62 33.47 20.15 22.40 3.26 17.67 29.02 8.54 30 ER4a ExonRegion 0 81.83 1.91 19.01 12.19 42.04 27.80 28.77 26.17 19.93 11.74 45.53 25.89 45.60 66.73 26.92 79.39 84.52 29.03 16.02 14.73 44.47 38.33 46.52 31 E4_Da NovelBoundary 0 31.71 18.55 14.69 11.99 41.26 14.42 13.78 11.05 12.44 14.67 17.53 25.96 40.42 34.67 34.49 41.10 36.65 23.59 12.14 6.01 19.95 20.70 20.57 32 E4a_E5a KnownJunction 0 75.20 0.00 7.57 6.09 22.84 2.61 3.84 18.69 27.05 11.93 26.32 6.00 12.99 31.61 8.90 42.30 45.44 13.97 8.47 12.14 34.29 18.86 18.52 33 I4 Intron 0 21.00 1.88 7.59 3.75 11.73 11.00 4.89 4.16 4.67 2.37 20.52 8.82 20.56 26.82 10.12 26.06 22.09 11.23 3.68 5.41 14.75 14.42 16.94 34 I4_SR1 SilentIntronRegion 1 21.17 1.89 7.65 3.78 11.83 11.10 4.93 4.20 4.71 2.39 20.71 8.90 20.75 27.06 10.20 26.30 22.28 11.33 3.71 5.46 14.88 14.56 17.10 35 E5_Aa NovelBoundary 0 43.56 6.05 9.17 5.36 12.56 5.22 3.31 6.33 14.29 9.54 19.69 18.91 0.00 38.26 5.19 40.16 24.96 29.89 0.00 5.75 19.27 7.84 19.63 36 ER5a ExonRegion 0 88.68 24.20 56.61 39.66 40.94 94.26 33.76 66.37 101.77 55.85 74.61 27.28 40.80 88.35 48.45 90.06 96.39 100.15 31.22 81.28 89.69 87.09 89.27 37 ER5b ExonRegion 0 106.60 48.16 65.23 52.80 73.27 126.47 56.18 91.09 109.18 74.42 96.38 43.61 65.80 143.64 78.61 130.27 113.89 127.94 54.13 78.70 103.77 106.93 96.32 38 E5b_E6a KnownJunction 0 147.95 81.10 47.51 55.70 91.09 150.14 35.46 75.82 70.28 68.85 102.08 38.11 101.13 92.35 43.51 104.84 92.66 88.96 86.31 62.38 60.48 105.02 45.58 39 E6_Aa NovelBoundary 0 91.42 0.00 12.57 15.18 15.11 11.47 13.51 24.56 7.96 0.00 17.85 12.90 0.00 3.00 5.19 26.32 38.90 8.79 0.00 0.00 21.93 8.08 0.00 40 E6a_E6c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41 ER6a ExonRegion 0 133.42 83.77 46.23 52.58 74.82 197.34 57.75 73.53 81.76 70.71 111.81 63.44 117.79 136.80 66.39 125.40 111.72 96.08 70.69 63.26 77.30 111.23 62.12 42 E6_Ab KnownBoundary 0 113.50 58.28 38.20 36.29 63.58 182.91 86.07 52.99 60.13 40.35 70.49 48.77 68.83 96.59 50.81 96.98 78.26 44.52 32.10 60.98 49.05 91.18 73.75 43 ER6b ExonRegion 0 122.01 58.50 49.95 49.54 62.96 178.31 68.85 82.76 88.93 68.48 98.81 51.19 91.04 118.27 60.93 123.08 92.23 91.52 41.22 67.33 68.96 110.55 68.41 44 E6_Ac KnownBoundary 0 164.92 34.60 90.77 46.05 61.46 92.05 53.79 122.36 123.00 58.24 96.60 40.66 78.40 92.47 48.95 101.26 84.71 54.01 26.73 51.20 54.55 81.93 79.30 45 ER6c ExonRegion 0 113.15 44.03 67.35 50.79 58.56 127.59 63.60 93.34 114.15 64.71 103.04 42.30 74.68 117.56 51.44 106.88 88.24 62.61 34.18 59.49 54.16 99.21 80.19 46 ER6d ExonRegion 0 197.04 71.55 131.99 80.68 153.41 184.69 93.33 133.92 146.70 82.32 135.51 149.47 145.51 167.44 73.59 122.58 158.77 92.22 56.69 82.17 68.52 132.77 120.96 47 E6b_E7a KnownJunction 0 185.88 54.79 135.51 88.93 181.83 317.66 122.24 137.19 151.91 97.46 156.09 161.00 117.69 159.87 58.35 125.35 169.80 99.53 64.66 124.26 83.46 163.31 89.97 48 ER7a ExonRegion 0 126.99 63.62 124.70 79.05 153.54 264.59 97.91 113.75 137.10 80.56 145.34 104.53 109.43 134.42 55.54 112.52 154.36 82.09 47.02 98.48 90.77 149.32 81.25 49 I7_SR1 SilentIntronRegion 0 18.72 2.97 4.40 1.08 10.63 26.05 2.38 1.73 3.20 1.06 2.13 4.00 7.46 5.75 5.58 10.29 7.79 1.56 3.02 7.97 6.72 4.38 4.14 50 E8a_E9b KnownJunction 0 146.32 29.34 88.47 53.14 154.33 190.86 56.13 87.53 99.97 48.86 86.50 124.69 47.24 50.27 43.76 79.81 61.90 36.56 50.35 58.93 100.94 94.18 80.92 51 ER8a ExonRegion 0 126.76 58.82 115.23 72.28 155.39 236.90 80.22 102.88 136.05 75.23 116.26 88.51 74.69 68.69 55.55 108.43 133.14 62.55 57.45 74.15 103.33 131.80 75.70 52 I8 Intron 0 57.97 20.55 21.70 16.53 46.55 40.25 25.44 28.72 23.29 17.41 44.07 32.62 30.71 53.15 23.80 52.40 41.52 32.00 20.52 22.08 16.23 26.20 24.02 53 I8_SR1 SilentIntronRegion 1 49.00 18.78 10.55 13.33 37.68 39.70 22.37 24.16 17.28 14.56 36.66 40.94 24.21 50.23 18.72 48.04 38.80 32.71 20.29 19.91 18.33 24.29 27.46 54 I8_AR1 ActiveIntronRegion 0 56.56 20.73 27.31 18.93 53.70 42.84 28.59 33.91 28.14 20.43 49.14 32.86 35.07 56.18 27.10 59.47 43.82 36.30 22.19 23.28 16.89 27.93 25.11 55 I8_SR2 SilentIntronRegion 1 28.67 12.57 11.25 5.45 24.08 35.01 9.39 2.83 4.94 3.44 36.73 27.16 8.10 37.21 25.58 12.43 33.01 14.78 9.56 19.15 6.61 18.75 17.62 56 I8_AR2 ActiveIntronRegion 1 90.69 24.66 16.16 11.04 27.86 27.27 15.66 11.25 10.67 7.68 32.90 12.31 22.59 44.16 16.56 24.85 35.58 6.75 12.38 20.66 8.35 21.50 10.21 57 E9_Aa NovelBoundary 0 157.73 23.29 47.31 19.68 75.13 29.02 28.13 48.02 24.54 21.01 46.38 18.16 13.31 72.11 34.24 93.48 42.36 34.16 31.53 20.58 32.31 23.64 25.78 58 ER9a ExonRegion 0 83.05 28.63 53.62 34.17 50.09 73.14 41.00 38.34 40.31 30.19 48.42 26.67 30.14 59.56 32.33 56.22 69.98 54.17 28.56 32.85 29.29 41.16 28.47 59 E9_Ab KnownBoundary 1 142.47 27.82 70.34 33.96 68.00 89.27 62.00 51.14 50.03 44.73 75.55 6.15 6.82 86.06 22.87 56.91 67.88 84.48 37.55 45.64 30.15 50.15 53.95 60 ER9b ExonRegion 0 234.23 67.25 162.64 86.56 112.04 181.03 68.37 134.15 124.96 92.04 105.35 59.89 40.27 137.39 90.90 143.92 131.00 161.05 53.81 82.52 107.26 129.21 110.77 61 E9_Da KnownBoundary 1 303.46 76.04 237.60 149.50 177.76 155.99 75.16 175.51 144.30 127.51 164.25 32.71 54.70 223.62 167.75 410.58 246.84 273.43 164.90 123.23 166.49 208.32 226.55 62 E9a_E9c KnownJunction 0 2.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 63 ER9c ExonRegion 0 167.10 55.81 184.81 91.49 68.54 123.14 34.30 139.76 116.24 105.25 124.66 31.53 41.03 149.45 115.43 161.31 134.00 206.93 95.59 104.34 126.08 121.73 156.68 64 E9_Ac KnownBoundary 1 350.14 92.15 257.24 103.32 78.52 164.51 55.07 143.96 145.92 101.00 179.68 17.41 44.80 177.88 165.03 269.25 241.79 191.68 140.43 101.24 133.50 179.48 192.84 65 ER9d ExonRegion 0 353.17 89.55 185.08 97.61 84.49 171.06 65.45 151.78 135.48 98.65 127.07 34.83 40.10 125.50 103.09 126.11 137.89 140.01 91.74 88.61 127.20 109.51 135.77 66 E9_Db KnownBoundary 0 385.48 117.68 147.93 98.96 110.36 172.85 83.69 121.09 83.42 79.97 82.97 36.01 50.00 151.92 108.91 129.88 148.95 133.52 109.93 108.28 121.45 106.67 150.50 67 E9b_E9d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 68 ER9e ExonRegion 1 319.87 123.61 192.14 112.53 109.53 200.92 72.53 162.06 143.62 108.81 109.17 21.93 34.16 131.77 83.19 118.05 120.63 184.49 78.46 95.05 119.05 117.36 106.61 69 E9_Ad KnownBoundary 1 717.53 142.54 271.81 141.87 234.38 360.25 139.07 208.08 187.04 118.70 193.00 39.91 46.75 160.93 136.84 355.72 335.20 260.29 66.83 102.65 210.91 251.18 205.04 70 ER9f ExonRegion 0 291.53 91.67 187.67 100.94 151.86 244.44 106.73 163.64 136.73 92.48 114.09 48.36 82.47 139.29 105.84 128.19 139.84 131.96 81.62 89.75 117.43 129.45 115.18 71 E9_Dc KnownBoundary 1 308.43 105.24 232.01 93.69 181.66 196.82 106.65 169.55 128.07 109.68 91.97 84.48 223.04 145.45 93.21 202.51 151.85 120.13 90.07 111.86 119.04 132.63 158.52 72 ER9g ExonRegion 0 290.01 102.22 178.46 112.55 115.28 158.49 72.72 151.16 135.12 89.61 105.28 54.63 62.02 120.36 135.86 94.12 90.26 95.75 56.31 86.72 78.50 140.69 82.56 73 E9_Dd KnownBoundary 1 363.69 171.55 91.87 59.87 130.82 33.84 61.70 100.47 48.03 31.32 10.06 96.33 47.72 20.48 16.56 14.61 0.00 1.82 14.40 24.42 3.15 68.83 16.99 74 ER9h ExonRegion 1 97.48 32.13 29.90 17.37 31.04 12.16 14.26 25.63 11.75 8.88 5.30 39.46 21.31 9.00 14.51 3.82 0.00 0.00 7.74 8.33 1.39 25.00 10.15 75 E9_De NovelBoundary 1 9.41 14.87 2.54 2.06 11.54 0.00 0.00 13.88 9.20 1.42 0.00 11.40 20.29 0.00 4.57 12.48 0.00 0.00 13.74 20.52 2.78 9.37 4.35 76 ER10a ExonRegion 0 2.80 1.17 0.12 0.07 2.68 0.05 0.07 7.99 1.08 0.97 6.96 11.36 0.12 4.39 8.85 8.69 0.99 0.97 3.19 2.18 0.00 0.00 0.59 77 E10_Ab KnownBoundary 0 10.37 3.35 0.00 0.00 7.72 0.00 0.00 13.06 4.17 4.57 13.79 12.90 0.00 7.00 0.00 11.19 0.00 2.11 3.95 2.62 0.00 0.00 3.24 78 ER10b ExonRegion 0 8.96 1.73 2.99 4.77 6.32 2.25 1.89 8.11 4.05 1.63 35.99 16.57 6.17 10.05 9.57 29.37 24.92 5.85 1.13 1.70 6.87 1.16 1.58 79 ER10c ExonRegion 0 1.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00