Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AL008729.1 Gene 0 7.50 6.48 3.88 11.51 19.90 9.74 9.85 20.98 11.73 20.58 5.48 1.26 8.50 18.61 6.83 23.16 16.41 15.95 22.56 19.59 5.48 2.95 5.20 2 446030 Transcript 0 6.05 3.87 2.82 11.74 10.63 4.48 7.89 16.44 10.16 17.43 3.66 3.25 3.81 14.44 4.24 23.62 11.54 15.16 23.27 12.52 3.38 4.07 5.48 3 IG46 Intergenic 0 4.99 4.07 3.80 8.08 10.38 5.13 9.80 11.07 9.55 16.45 6.80 4.64 6.91 12.17 4.66 12.73 10.46 17.83 16.31 22.34 4.93 2.14 7.89 4 IG46_SR5 SilentIntergenicRegion 0 3.01 3.37 1.73 4.71 7.88 3.64 10.29 6.95 8.81 9.47 6.47 9.05 8.01 12.27 2.68 9.03 9.86 11.72 12.25 20.19 4.33 1.42 6.38 5 IG46_AR6 ActiveIntergenicRegion 0 4.10 2.85 1.15 4.04 9.92 4.19 9.55 6.21 7.36 13.66 7.82 5.66 3.19 12.47 6.45 14.04 9.71 21.78 14.26 29.90 6.90 2.54 9.81 6 IG46_SR4 SilentIntergenicRegion 0 3.00 3.50 3.00 5.73 8.20 4.62 7.88 8.28 7.76 15.53 6.88 3.44 5.44 11.20 3.18 12.10 9.40 19.24 18.62 21.58 4.89 2.17 7.11 7 IG46_AR5 ActiveIntergenicRegion 0 16.96 10.70 4.18 16.36 14.44 5.55 17.51 16.78 7.86 14.39 10.05 5.55 12.65 10.88 6.81 12.70 10.93 11.79 15.40 26.21 3.26 3.42 12.53 8 IG46_SR3 SilentIntergenicRegion 0 4.73 1.70 5.52 4.89 9.07 5.58 12.18 10.71 8.68 14.02 5.80 1.55 8.20 14.36 5.47 10.61 8.89 9.69 13.08 20.84 3.04 1.77 6.27 9 IG46_AR4 ActiveIntergenicRegion 0 9.47 4.76 8.84 19.61 12.55 7.86 11.76 23.83 17.68 28.59 8.44 3.39 13.13 15.93 12.46 21.92 17.10 37.70 23.90 30.33 8.07 3.33 11.55 10 IG46_SR2 SilentIntergenicRegion 0 6.76 5.10 6.90 12.60 16.58 6.72 10.67 16.02 12.00 25.77 6.21 3.06 5.19 12.36 5.20 15.60 11.20 17.39 14.12 21.36 5.56 1.72 8.87 11 IG46_AR3 ActiveIntergenicRegion 0 10.51 5.97 3.27 13.56 16.46 4.46 12.18 38.26 17.13 23.74 5.67 0.00 5.78 6.85 6.19 11.29 7.21 21.37 23.68 17.48 3.75 2.71 6.56 12 IG46_AR2 ActiveIntergenicRegion 0 9.68 8.39 6.56 18.54 11.44 1.70 6.12 31.54 20.66 28.87 2.22 3.25 3.52 17.78 4.93 11.89 22.12 19.40 10.19 22.07 3.69 6.56 9.25 13 IG46_SR1 SilentIntergenicRegion 0 7.39 5.27 2.55 10.87 13.89 3.17 5.46 11.15 13.08 13.75 3.87 0.71 1.35 9.43 9.78 15.47 9.09 11.54 11.65 17.95 1.69 4.68 6.15 14 IG46_AR1 ActiveIntergenicRegion 0 8.02 4.01 0.00 2.71 33.59 16.99 10.54 6.73 3.59 8.62 1.09 2.39 7.78 18.42 9.54 15.92 10.95 3.57 20.58 19.09 1.48 2.80 11.71 15 ER1a ExonRegion 0 1.32 0.49 0.46 3.94 1.45 0.50 1.43 4.11 3.40 4.71 1.67 2.69 0.00 5.97 5.41 12.61 5.00 4.94 12.22 3.45 0.54 3.60 3.73 16 E1_Da NovelBoundary 0 3.70 3.35 6.33 14.88 0.00 2.90 9.01 15.85 17.45 3.01 2.11 6.15 0.00 2.65 0.00 3.93 9.26 7.21 14.02 6.52 0.00 0.00 0.00 17 E1a_E2a KnownJunction 0 7.19 2.57 2.93 17.15 4.16 0.00 9.49 18.40 12.47 21.52 2.53 6.30 0.00 14.36 0.00 31.44 9.26 20.77 31.44 8.95 2.41 5.88 7.00 18 I1 Intron 0 6.03 5.79 3.22 13.50 18.52 8.21 7.18 15.37 13.98 12.05 4.19 3.49 6.40 6.76 4.79 8.47 10.31 10.97 21.17 14.14 1.20 3.11 2.39 19 I1_SR1 SilentIntronRegion 0 6.06 5.82 3.24 13.57 18.62 8.25 7.22 15.45 14.06 12.12 4.22 3.51 6.43 6.79 4.82 8.50 10.36 11.02 21.28 14.21 1.20 3.13 2.40 20 E2_Aa NovelBoundary 0 6.67 18.62 5.14 12.59 8.40 10.51 6.49 16.84 15.05 10.48 6.84 5.55 0.00 7.06 9.64 4.27 4.30 13.39 9.41 21.22 0.00 0.00 4.18 21 ER2a ExonRegion 0 9.63 8.55 5.06 14.13 26.28 12.94 12.76 26.82 14.61 26.07 6.79 0.77 11.44 22.98 7.32 26.80 20.36 19.76 26.14 25.17 7.19 2.73 5.71 22 IG45 Intergenic 0 78.40 113.00 54.76 75.13 117.26 71.19 46.69 92.26 55.77 97.79 8.53 18.97 23.24 40.54 33.59 70.10 52.28 80.44 73.39 76.79 24.39 25.12 23.63 23 IG45_SR4 SilentIntergenicRegion 0 10.83 10.40 8.00 13.36 30.32 7.04 15.73 22.13 8.75 15.62 6.36 2.61 6.10 12.77 7.02 15.76 7.84 19.47 22.09 20.61 2.42 0.00 3.76 24 IG45_AR5 ActiveIntergenicRegion 0 6.89 6.40 9.91 13.88 23.81 8.16 12.07 19.56 7.39 14.47 6.08 2.87 3.35 14.20 9.74 13.55 10.75 19.05 15.92 19.39 1.20 5.43 7.01 25 IG45_SR2 SilentIntergenicRegion 0 24.93 12.55 15.29 25.68 33.56 13.22 15.62 34.32 18.75 29.72 9.08 4.27 6.71 18.23 12.16 19.56 14.18 28.36 23.70 24.54 4.79 2.87 8.48 26 IG45_AR3 ActiveIntergenicRegion 0 156.97 250.04 103.53 134.64 227.18 146.46 90.01 164.10 99.00 174.08 9.35 38.46 44.12 67.75 61.55 122.86 92.73 125.89 117.07 139.36 43.03 50.27 39.20 27 IG45_AR2 ActiveIntergenicRegion 0 52.48 67.12 65.35 108.01 91.51 55.36 30.05 113.20 86.90 156.52 9.49 14.94 23.78 54.07 41.57 132.69 89.76 197.90 133.67 130.28 50.74 40.70 41.25 28 IG45_AR1 ActiveIntergenicRegion 0 49.39 146.00 20.64 45.11 118.83 88.45 60.83 31.29 31.76 52.88 7.58 2.00 9.38 54.51 35.48 83.37 74.65 58.18 160.17 54.99 48.99 23.19 33.36 29 IG45_SR1 SilentIntergenicRegion 0 45.51 37.92 53.52 76.52 87.07 53.39 20.66 98.53 65.50 123.25 5.15 15.22 22.68 33.30 17.60 76.35 60.93 116.08 130.33 38.46 38.16 18.64 30.74