Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PECI Gene 0 71.17 37.15 40.88 36.92 39.61 29.82 31.19 38.99 41.35 64.99 95.27 27.66 32.49 24.98 23.95 52.00 35.63 15.24 19.37 17.70 112.21 89.46 65.81 2 361538 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 380114 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 413766 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 380118 Transcript 0 0.00 0.00 0.00 0.00 1.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6 380120 Transcript 0 0.52 0.98 1.22 1.07 0.84 1.02 0.89 0.53 1.47 1.16 3.00 1.02 0.96 0.74 0.35 0.86 0.97 0.65 0.27 0.33 4.16 1.37 1.01 7 496241 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 464057 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 489086 Transcript 0 0.59 0.94 0.95 0.00 2.03 3.46 2.89 0.48 1.74 0.00 0.00 8.90 0.00 1.74 0.00 2.20 1.65 1.03 0.00 0.00 0.08 2.32 1.96 10 465828 Transcript 0 0.00 0.12 0.43 0.00 0.00 0.32 0.08 0.00 0.43 0.57 1.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.00 0.87 0.13 0.12 2.05 11 380125 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 495548 Transcript 0 0.62 0.00 0.49 0.00 0.96 0.47 0.36 0.33 0.58 0.00 1.47 0.03 0.18 0.29 0.00 0.05 0.00 0.00 0.00 0.00 4.56 0.17 1.13 13 464583 Transcript 0 44.00 9.95 10.74 29.57 15.48 10.76 13.74 21.93 23.24 26.30 9.86 5.14 10.01 8.32 12.26 11.16 6.85 7.33 6.66 7.97 26.63 38.57 30.81 14 449380 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 15 478266 Transcript 0 3.70 0.00 0.00 0.00 3.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.36 0.00 0.00 0.00 0.00 0.00 6.25 0.00 16 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.19 0.00 0.00 0.00 0.00 17 ER1b ExonRegion 0 7.41 1.69 0.00 0.00 0.00 4.89 4.63 0.00 1.85 0.00 4.83 0.00 2.35 0.00 0.00 2.97 1.65 0.00 5.31 0.71 9.18 0.00 6.85 18 ER1c ExonRegion 0 16.23 6.78 0.00 0.00 0.00 9.17 7.94 0.00 2.47 0.00 7.73 0.00 4.69 0.00 0.00 5.94 3.30 0.00 9.56 4.96 16.16 2.08 8.81 19 E1_Ag KnownBoundary 0 202.11 72.68 1.71 2.00 38.12 39.13 51.85 2.42 6.97 7.79 51.80 0.00 6.17 0.00 0.00 49.99 28.24 6.14 31.72 25.25 116.82 21.19 87.92 20 ER1d ExonRegion 0 76.72 31.01 3.78 4.09 16.72 16.66 19.86 9.65 10.09 9.18 24.64 0.00 4.69 0.00 0.00 26.50 16.50 4.93 11.41 10.28 61.34 7.29 37.69 21 ER1e ExonRegion 0 117.47 51.86 9.19 5.45 26.76 26.59 29.13 15.56 14.82 16.06 39.62 0.00 4.69 0.00 10.15 57.96 24.76 7.39 15.93 15.96 102.47 17.71 58.73 22 ER1f ExonRegion 1 272.37 114.77 20.14 17.97 59.03 69.23 68.43 28.63 36.13 59.64 111.75 0.00 13.19 12.99 40.98 147.31 66.22 15.94 39.62 28.06 258.38 100.79 171.43 23 ER1g ExonRegion 1 535.48 221.44 58.76 58.66 127.80 129.00 125.09 78.16 93.41 163.98 290.02 5.65 22.84 46.50 71.59 365.89 168.27 33.74 93.97 64.15 566.50 377.21 470.95 24 E1_Da KnownBoundary 0 0.00 0.00 3.40 0.00 0.00 0.00 0.00 0.00 6.45 2.77 2.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.00 0.00 0.00 8.45 25 E1a_E2b KnownJunction 0 46.01 47.69 28.41 38.16 12.48 11.02 9.41 22.34 64.09 90.69 34.96 18.31 0.00 2.41 0.00 35.29 11.03 28.27 11.29 11.06 76.42 46.78 44.82 26 E1a_E2c KnownJunction 0 55.34 13.88 50.18 41.45 7.30 10.73 17.36 74.18 49.71 127.70 71.12 28.36 29.54 7.12 0.00 71.09 32.54 15.34 7.44 16.49 85.38 71.09 72.73 27 ER1h ExonRegion 0 0.00 0.24 0.85 0.00 0.00 0.64 0.15 0.00 0.86 1.15 3.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.00 1.73 0.26 0.24 4.10 28 E1_Ah KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.38 0.00 0.00 8.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.80 0.00 0.00 0.00 0.00 29 E1_Ai KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.51 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 ER1i ExonRegion 0 0.00 0.00 0.00 0.00 1.19 0.00 0.00 0.00 0.00 1.15 5.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.19 0.00 0.00 0.00 0.00 31 ER1j ExonRegion 0 0.00 0.00 2.08 0.00 1.41 0.25 0.76 0.00 2.69 0.37 6.47 0.00 0.00 1.09 0.00 0.00 0.00 0.42 0.54 0.10 6.19 0.66 1.88 32 E1_Db KnownBoundary 0 0.00 0.00 8.28 0.00 0.00 0.00 0.00 0.00 5.96 1.45 10.16 0.00 0.00 2.47 0.00 0.00 0.00 2.11 0.00 0.00 0.00 3.12 11.87 33 E1b_E2c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 ER1k ExonRegion 0 3.25 0.00 4.73 0.00 0.55 4.46 0.00 0.00 3.26 1.05 5.37 0.00 2.91 1.32 0.00 4.87 0.00 1.78 0.00 1.72 0.15 3.30 10.13 35 E1_Dc KnownBoundary 0 0.00 0.00 1.66 0.00 0.00 0.00 0.00 0.00 1.79 0.00 2.00 0.00 7.47 2.47 0.00 3.16 0.00 2.07 0.00 0.00 2.90 3.00 0.00 36 E1c_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 37 ER1l ExonRegion 0 1.25 0.00 0.98 0.00 1.92 0.95 0.71 0.67 1.16 0.00 2.93 0.07 0.36 0.58 0.00 0.11 0.00 0.00 0.00 0.00 6.77 0.35 2.25 38 E1d_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.35 0.00 0.00 39 I1_AR2 ActiveIntronRegion 0 7.06 2.03 4.08 1.36 10.70 30.56 0.00 3.46 12.76 0.00 11.28 9.38 3.13 2.17 0.00 2.97 0.55 1.85 0.00 2.13 1.10 4.17 5.87 40 ER2a ExonRegion 0 8.50 0.79 2.84 1.80 7.02 1.91 3.75 2.83 5.83 1.04 9.48 7.10 5.54 0.05 0.00 5.41 2.02 2.23 0.44 0.30 4.59 6.77 14.28 41 E2_Ab KnownBoundary 0 13.34 0.00 1.15 0.00 15.03 5.79 3.93 4.52 8.10 0.00 9.74 7.65 8.28 0.00 0.00 0.00 4.30 5.14 0.00 0.00 5.50 5.20 20.49 42 E2_Ac KnownBoundary 0 16.37 0.00 15.17 9.56 7.64 2.38 5.92 3.45 8.54 10.29 4.11 18.16 0.00 0.00 0.00 0.00 0.00 1.66 0.00 0.00 22.98 10.29 2.99 43 ER2b ExonRegion 0 79.58 41.89 38.35 34.21 39.33 19.07 20.12 29.04 67.19 84.07 55.86 25.11 13.13 2.92 3.48 60.33 24.10 18.48 16.88 15.53 113.05 70.01 85.75 44 ER2c ExonRegion 0 64.67 41.80 84.99 60.62 45.24 43.76 23.31 73.11 102.01 156.69 298.56 88.24 63.44 36.21 50.58 128.37 117.92 44.86 49.50 44.96 405.37 181.55 163.95 45 E2a_E3a KnownJunction 1 13.56 47.82 126.96 144.97 85.14 57.13 51.36 131.11 142.13 225.08 279.81 94.08 87.49 83.00 138.45 565.83 60.78 125.48 130.64 63.60 340.33 471.25 622.81 46 ER3a ExonRegion 0 49.77 58.69 108.23 109.03 93.79 92.28 78.62 105.85 119.69 172.79 225.47 91.92 234.93 76.71 86.98 249.18 91.82 72.49 61.42 56.65 386.76 258.71 273.17 47 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 48 E3a_E4b KnownJunction 0 93.35 163.98 137.69 93.76 154.24 168.43 218.43 96.40 128.41 196.04 325.66 135.64 140.58 110.01 64.40 134.75 167.37 60.31 42.07 54.01 657.06 209.48 166.12 49 ER4a ExonRegion 0 1.05 1.96 2.44 2.13 1.68 2.03 1.79 1.06 2.93 2.32 6.01 2.03 1.92 1.49 0.70 1.72 1.95 1.29 0.54 0.67 8.31 2.74 2.02 50 E4_Ab KnownBoundary 0 0.00 0.00 2.48 2.86 0.00 0.00 2.25 0.00 2.89 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 2.36 0.00 0.00 0.00 0.00 0.00 51 ER4b ExonRegion 0 307.29 201.66 143.36 99.43 112.62 87.91 92.21 98.84 127.16 192.41 374.48 122.86 206.01 112.53 85.71 171.66 140.31 50.46 50.91 54.72 508.92 266.00 194.62 52 E4_Da KnownBoundary 0 3.41 3.35 3.05 0.00 0.00 0.00 9.49 1.85 3.99 0.00 0.00 0.00 0.00 4.36 0.00 0.00 4.77 2.53 0.00 0.00 0.00 4.96 8.19 53 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 12.65 0.00 3.53 0.00 1.79 1.67 4.58 0.00 0.00 0.00 0.00 4.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54 E4a_E6a KnownJunction 0 364.43 266.14 155.46 98.09 262.56 153.49 141.14 108.23 138.37 216.27 440.16 130.99 183.92 123.49 100.01 174.14 160.92 43.32 96.19 57.14 411.62 378.73 217.25 55 ER4c ExonRegion 0 0.59 0.94 0.95 0.00 2.03 3.46 2.89 0.48 1.74 0.00 0.00 8.90 0.00 1.74 0.00 2.20 1.65 1.03 0.00 0.00 0.08 2.32 1.96 56 ER5a ExonRegion 0 1.79 0.17 0.00 0.00 2.19 0.05 4.49 0.00 2.99 0.76 2.94 0.12 0.00 0.00 0.00 1.05 0.70 0.00 0.00 0.03 1.68 2.79 1.90 57 E5a_E6a KnownJunction 0 7.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.30 0.00 0.00 0.00 0.00 6.25 3.50 58 ER6a ExonRegion 0 317.83 238.95 132.68 91.77 240.67 145.89 143.43 84.98 122.14 199.56 469.69 105.83 199.59 106.11 71.08 159.17 167.61 39.83 78.40 54.14 384.06 353.16 188.11 59 ER6b ExonRegion 0 267.25 194.75 128.92 100.80 250.08 129.32 148.92 79.87 116.79 192.15 387.66 93.50 113.55 86.14 55.79 145.18 133.43 41.47 61.26 49.55 275.63 300.63 167.95 60 E6_Db NovelBoundary 0 36.67 8.95 11.38 8.46 37.78 0.00 2.21 12.53 5.24 0.00 2.32 0.00 0.00 2.41 0.00 12.48 0.00 0.00 4.14 0.00 11.06 2.94 11.10 61 E6b_E7a KnownJunction 0 232.71 202.86 140.98 128.02 247.20 96.65 147.55 83.54 129.28 202.62 317.87 109.69 128.89 77.52 74.29 121.93 99.02 51.65 41.60 58.16 226.91 296.74 172.77 62 E6b_E8a KnownJunction 0 3.70 0.00 0.00 0.00 3.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.36 0.00 0.00 0.00 0.00 0.00 6.25 0.00 63 ER7a ExonRegion 0 205.53 148.67 174.28 129.05 175.82 121.44 140.92 122.22 129.44 235.36 398.72 132.53 169.84 99.28 98.64 207.64 150.94 58.82 59.01 63.31 327.48 349.00 244.00 64 E7_Da KnownBoundary 0 13.34 14.87 3.55 18.95 4.24 2.16 2.16 2.55 15.16 17.35 9.79 0.00 14.77 4.83 0.00 4.36 12.90 4.73 0.00 0.00 10.56 28.11 16.73 65 E7a_E7b KnownJunction 0 172.10 132.61 187.84 138.34 183.79 107.89 123.52 123.51 128.15 230.10 489.28 138.80 87.01 88.23 73.92 192.94 197.94 42.70 37.27 59.12 507.13 405.43 215.63 66 ER7b ExonRegion 0 7.71 2.88 0.68 3.47 1.28 2.84 3.07 1.07 1.52 1.79 2.62 1.13 2.65 0.52 0.10 0.92 1.49 0.39 0.63 1.75 1.76 3.52 3.68 67 E7_Ab KnownBoundary 0 14.08 0.00 5.26 1.43 0.00 7.15 21.86 4.52 1.79 0.00 2.68 0.00 0.00 7.06 0.00 3.42 4.77 0.00 0.00 0.00 12.36 8.88 7.77 68 ER7c ExonRegion 0 149.96 145.43 154.68 97.21 140.48 142.99 136.18 110.65 101.24 189.59 317.61 101.85 60.77 79.05 76.40 170.13 143.51 49.04 50.46 47.16 372.85 267.06 156.67 69 E7_Db NovelBoundary 0 0.00 6.38 4.46 12.72 8.66 0.00 6.32 6.82 7.15 6.96 0.00 0.00 0.00 12.24 0.00 11.19 4.58 2.57 0.00 5.31 28.91 22.35 11.18 70 E7b_E8a KnownJunction 0 213.82 250.28 140.68 88.03 284.80 135.66 193.43 130.82 80.61 153.81 380.52 116.59 80.19 96.77 73.18 275.74 139.04 49.99 92.61 45.19 500.15 231.40 188.48 71 E7b_E8b NovelJunction 0 6.37 9.14 11.56 2.00 0.00 0.00 6.67 3.24 0.00 9.99 0.00 0.00 0.00 9.54 4.45 11.28 8.04 0.00 0.00 8.37 8.83 17.33 3.93 72 Ix Intron 0 6.60 3.17 2.99 10.23 8.77 6.08 9.15 6.07 8.68 7.99 3.86 2.91 10.30 2.66 0.82 4.99 2.51 1.51 1.53 4.68 6.95 22.07 10.09 73 Ix_SR1 SilentIntronRegion 0 6.90 3.23 3.13 10.70 9.17 6.36 9.57 6.35 9.08 8.36 3.88 3.04 10.77 2.73 0.86 5.22 2.62 1.58 1.60 4.89 7.27 22.91 10.56 74 Ix Intron 0 10.41 4.56 3.15 10.87 10.16 6.33 8.34 7.56 11.75 8.11 3.17 9.12 14.71 2.87 1.21 2.82 3.13 1.19 1.37 3.49 1.33 23.73 7.10 75 Ix_AR1 ActiveIntronRegion 0 12.16 4.20 3.36 12.60 12.91 7.57 10.94 9.47 11.84 10.60 1.78 13.28 13.69 2.28 1.33 2.73 3.03 1.06 1.46 2.93 0.51 28.72 6.07 76 Ix_SR1 SilentIntronRegion 0 9.50 4.84 3.07 9.96 8.62 5.65 6.86 6.50 11.86 6.70 4.06 6.71 15.54 3.26 1.14 2.91 3.23 1.29 1.34 3.88 1.85 21.02 7.82 77 E8_Aa NovelBoundary 0 56.23 12.37 2.75 30.10 12.56 8.46 14.40 17.05 31.51 15.04 7.42 0.00 0.00 4.53 6.30 7.78 4.39 2.57 14.40 0.00 32.43 37.78 22.62 78 ER8a ExonRegion 0 204.10 167.84 164.01 92.75 203.48 117.28 128.48 118.76 96.24 185.53 324.66 119.83 56.85 98.82 60.60 214.52 129.18 61.80 73.12 44.26 395.27 254.58 217.25 79 E8_Da KnownBoundary 0 15.56 3.35 1.48 19.38 11.97 2.90 17.58 18.11 20.54 10.83 12.11 0.00 20.45 5.12 12.49 3.85 0.00 0.00 7.62 3.13 17.05 25.17 8.11 80 E8a_E8b KnownJunction 1 275.46 105.70 184.14 81.71 203.06 113.63 157.09 68.35 103.30 172.19 278.07 106.68 52.11 130.08 46.36 187.73 149.60 47.22 47.15 42.19 403.28 239.67 170.98 81 ER8b ExonRegion 0 44.00 9.95 10.74 29.57 15.48 10.76 13.74 21.93 23.24 26.30 9.86 5.14 10.01 8.32 12.26 11.16 6.85 7.33 6.66 7.97 26.63 38.57 30.81 82 E8_Ab KnownBoundary 0 58.90 3.35 23.95 35.36 28.18 11.19 7.95 24.77 33.62 59.20 4.84 0.00 6.33 0.00 14.71 8.37 4.58 5.39 14.40 3.07 27.68 37.35 38.93 83 ER8c ExonRegion 1 231.59 98.21 166.83 101.65 116.52 91.43 95.12 137.62 134.85 243.35 363.05 70.82 51.92 93.06 66.63 183.73 105.81 42.76 89.17 56.70 363.15 280.40 193.92 84 E8b_E9a KnownJunction 1 208.85 74.39 153.31 83.71 142.36 78.93 97.60 134.48 130.70 255.27 321.24 73.67 42.53 51.62 76.02 104.42 95.28 29.31 57.98 48.58 294.99 249.04 164.24 85 ER9a ExonRegion 1 88.36 34.01 88.85 55.77 61.93 37.82 40.67 101.22 85.42 159.77 220.10 49.69 26.74 43.73 41.22 69.90 54.29 13.20 36.74 35.24 149.17 194.45 75.82 86 ER9b ExonRegion 0 12.70 4.07 1.23 2.73 8.03 3.67 2.65 3.46 1.24 11.47 11.60 4.33 4.69 8.12 20.31 5.94 0.00 0.00 0.00 0.00 4.41 4.17 5.87 87 ER9c ExonRegion 0 12.70 4.07 0.00 0.00 2.68 3.67 1.32 3.46 1.24 4.59 3.87 4.33 0.00 4.87 14.51 2.97 0.00 0.00 0.00 0.00 4.41 4.17 5.87 88 ER9d ExonRegion 0 6.35 2.03 0.00 0.00 2.68 2.29 1.32 3.46 0.00 0.00 0.48 0.00 0.00 3.65 2.90 0.74 0.00 0.00 0.00 0.00 2.20 3.13 5.87 89 ER9e ExonRegion 0 4.23 0.00 0.00 0.00 2.68 1.83 1.32 2.59 0.00 0.00 0.00 0.00 0.00 1.62 2.90 0.00 0.00 0.00 0.00 0.00 2.20 2.08 5.87 90 ER9f ExonRegion 0 0.71 0.00 0.00 0.00 2.68 0.31 1.32 1.73 0.00 0.00 0.00 0.00 0.00 0.81 2.90 0.00 0.00 0.00 0.00 0.00 1.10 1.39 1.47 91 ER9g ExonRegion 0 0.00 0.00 0.00 0.00 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 92 ER9h ExonRegion 0 0.00 0.00 0.00 0.00 1.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00