Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SNRNP48 Gene 0 53.31 60.61 26.64 45.07 53.78 24.11 37.17 30.65 24.77 42.07 47.22 64.64 44.35 50.48 33.65 48.07 42.90 14.92 18.27 20.84 17.46 58.35 29.32 2 397475 Transcript 1 8.89 19.73 4.76 6.89 7.72 5.74 6.98 4.85 9.95 7.06 2.05 31.21 19.32 14.19 5.19 15.47 13.37 5.31 0.00 3.26 0.00 12.49 7.77 3 342415 Transcript 0 52.16 67.50 24.17 39.14 38.64 20.64 29.67 24.95 22.60 35.02 58.26 55.40 46.93 39.10 42.07 42.37 35.72 12.46 14.90 19.34 15.43 52.57 24.19 4 496946 Transcript 1 14.39 29.14 4.14 11.68 33.54 12.26 19.45 8.27 8.41 18.09 10.59 58.94 45.72 22.58 5.59 12.82 11.66 3.93 3.46 10.08 3.40 23.95 12.13 5 ER1a ExonRegion 1 5.80 16.37 4.15 2.45 8.25 8.26 7.77 3.37 2.47 4.26 30.93 1.63 4.04 21.08 12.20 14.96 21.11 4.82 6.90 4.78 26.61 11.58 4.84 6 E1a_E2a KnownJunction 1 7.26 17.69 12.27 12.05 0.00 0.00 2.03 12.69 8.39 20.33 121.40 0.00 19.64 68.87 26.33 44.09 71.81 27.90 3.58 31.83 61.72 33.68 8.11 7 ER2a ExonRegion 0 10.73 18.94 16.99 18.35 23.40 8.49 13.33 18.04 13.20 19.33 75.64 27.34 44.80 64.68 44.71 86.74 52.26 65.27 25.34 26.52 21.73 50.66 40.03 8 E2a_E3a KnownJunction 0 17.71 12.63 18.36 24.34 35.57 20.44 21.82 22.30 18.06 21.36 74.65 32.41 21.10 38.50 19.90 31.44 48.71 32.46 9.13 24.16 20.57 58.11 4.35 9 ER3a ExonRegion 0 11.83 39.97 23.14 25.45 52.42 40.73 34.34 24.74 24.26 26.89 82.54 56.99 60.59 67.33 27.73 45.85 56.33 18.66 7.00 30.97 14.70 61.62 20.46 10 E3a_E4a KnownJunction 0 20.52 81.89 24.72 41.32 29.12 59.57 60.33 22.84 29.34 33.12 80.92 78.18 66.72 67.99 30.53 51.70 74.61 7.17 13.27 23.27 22.86 72.44 36.02 11 ER4a ExonRegion 0 24.38 59.71 18.12 22.08 21.33 20.44 23.92 15.37 23.32 27.10 83.42 77.99 80.79 62.15 34.89 54.37 55.15 10.84 13.38 24.91 17.81 51.62 29.17 12 E4_Da NovelBoundary 0 12.82 0.00 1.12 22.77 0.00 9.82 7.38 0.00 3.41 9.29 2.68 6.00 20.29 2.47 18.54 8.12 3.55 5.76 0.00 0.00 0.00 2.39 3.41 13 E4a_E5a KnownJunction 1 8.89 19.73 4.76 6.89 7.72 5.74 6.98 4.85 9.95 7.06 2.05 31.21 19.32 14.19 5.19 15.47 13.37 5.31 0.00 3.26 0.00 12.49 7.77 14 E4a_E5c KnownJunction 0 24.23 47.03 7.27 10.19 11.80 9.99 12.14 9.12 14.70 13.70 60.75 48.92 60.06 19.54 37.70 27.17 20.94 6.09 4.52 13.74 8.59 32.33 11.18 15 I4_AR1 ActiveIntronRegion 0 3.09 4.91 0.37 5.38 6.37 9.14 5.29 1.66 3.26 5.70 3.78 16.31 7.22 5.96 0.68 2.92 3.74 2.01 1.81 4.59 1.43 8.34 3.43 16 E5_Aa NovelBoundary 0 5.78 8.62 4.85 12.82 14.35 2.90 2.21 6.24 0.00 5.96 2.21 6.30 6.82 4.53 0.00 0.00 0.00 1.95 0.00 5.43 8.77 7.96 0.00 17 ER5a ExonRegion 1 5.14 20.19 0.44 0.44 6.40 2.49 9.08 1.17 3.04 4.75 1.24 35.25 28.98 9.63 1.14 7.96 9.20 2.44 0.00 7.22 0.39 15.18 2.83 18 ER5b ExonRegion 1 12.91 35.43 2.66 8.77 37.07 13.45 18.88 5.94 6.68 15.82 6.50 77.87 55.94 24.08 4.84 8.18 11.72 3.64 2.35 10.73 4.34 22.59 15.87 19 ER5c ExonRegion 1 10.58 26.10 6.13 17.26 37.01 7.34 24.27 12.10 10.70 23.70 7.41 77.93 38.30 15.43 5.32 3.47 6.60 1.85 5.84 17.02 6.61 10.76 14.68 20 ER5d ExonRegion 1 15.87 22.85 5.62 14.58 30.01 11.07 20.01 10.61 10.13 20.36 14.68 40.01 35.49 21.08 6.34 17.46 11.59 4.21 4.57 9.43 2.45 25.31 8.38 21 E5_Ac KnownBoundary 1 45.27 39.73 5.26 35.39 36.76 15.22 51.85 13.06 13.31 16.57 13.74 43.81 95.12 15.25 4.45 24.18 18.05 3.56 13.37 15.02 0.00 11.51 11.95 22 ER5e ExonRegion 0 79.79 82.10 31.92 45.35 57.61 26.91 48.73 35.39 39.40 42.94 85.19 134.88 103.08 67.50 52.53 71.38 95.74 17.33 15.50 35.25 20.51 76.46 56.56 23 E5c_E6a KnownJunction 0 120.47 132.54 49.32 71.75 145.16 51.22 81.52 46.91 44.39 41.02 101.24 167.45 139.28 82.23 82.21 98.09 89.85 25.54 42.45 52.41 27.00 102.81 83.14 24 ER6a ExonRegion 0 77.72 90.48 39.38 60.18 133.85 43.86 78.61 51.85 36.27 49.81 108.02 184.18 119.33 110.61 69.89 120.42 125.57 35.91 41.72 46.44 37.41 99.07 79.05 25 E6a_E7a KnownJunction 0 75.42 117.28 48.40 69.46 139.39 51.67 70.26 60.01 37.12 49.75 127.35 245.33 133.76 147.68 78.00 130.91 123.98 35.57 71.25 67.94 51.52 104.22 61.72 26 ER7a ExonRegion 0 68.58 83.29 44.17 59.03 92.39 36.63 56.37 56.88 42.41 53.79 137.26 134.55 89.11 105.02 61.55 94.91 155.07 34.13 40.55 45.59 80.20 69.60 63.15 27 E7a_E8a KnownJunction 0 119.35 54.73 47.81 64.76 87.61 35.43 80.46 50.23 53.73 38.04 100.08 91.38 76.46 126.55 58.59 74.34 107.62 35.28 47.15 51.90 57.02 60.44 63.77 28 ER8a ExonRegion 0 98.04 82.75 40.76 49.87 104.76 31.15 60.59 53.28 55.69 65.53 98.72 136.29 89.11 104.71 53.05 99.61 109.13 28.23 43.57 38.48 48.43 92.92 63.81 29 E8_Da NovelBoundary 0 10.45 6.64 0.00 14.58 29.29 11.58 3.84 4.60 6.60 5.16 18.00 19.36 20.45 15.36 18.05 11.96 17.77 5.02 0.00 6.14 19.46 10.29 0.00 30 E8a_E9a KnownJunction 1 42.90 52.10 26.64 60.83 77.16 41.91 28.26 50.32 65.71 62.05 56.86 94.23 132.78 70.93 47.10 72.37 62.09 18.20 37.37 20.71 8.53 79.85 61.80 31 I8_AR1 ActiveIntronRegion 0 6.14 4.42 4.86 5.89 13.61 2.22 11.23 6.23 4.45 4.54 10.29 16.74 9.74 8.52 3.13 7.90 10.36 4.00 0.00 5.15 3.72 14.60 5.68 32 I8_AR2 ActiveIntronRegion 0 6.35 8.13 9.96 11.41 33.78 5.50 18.04 5.19 6.18 1.86 3.87 1.62 9.38 8.12 11.24 5.94 0.00 1.85 0.00 2.13 0.00 13.54 2.57 33 I8_AR3 ActiveIntronRegion 0 8.87 6.81 9.74 11.01 19.65 3.18 9.65 6.34 4.24 4.34 2.92 10.24 10.11 6.08 4.94 5.82 2.82 1.73 0.82 2.25 0.19 8.47 2.74 34 E9_Aa NovelBoundary 1 17.34 13.29 12.33 8.26 26.66 0.00 3.89 9.08 6.31 3.79 2.68 6.30 39.77 9.36 0.00 4.36 0.00 0.00 0.00 0.00 0.00 3.06 0.00 35 ER9a ExonRegion 1 39.87 38.90 19.84 49.49 59.26 29.40 36.55 47.21 37.84 57.09 38.71 109.10 83.03 65.89 38.35 56.52 24.55 7.41 14.76 18.29 7.33 93.40 24.68 36 E9_Da KnownBoundary 1 38.97 17.83 32.05 65.83 52.97 22.03 26.94 32.82 32.73 49.18 41.91 97.98 61.68 65.16 9.02 23.07 32.16 5.22 0.00 17.71 8.46 39.13 15.45 37 ER9b ExonRegion 0 80.10 87.97 41.06 68.08 65.48 31.28 47.19 40.78 30.51 56.35 55.78 61.89 33.80 58.65 46.43 57.57 50.49 18.83 25.28 24.93 22.27 72.81 37.20 38 IG49_AR1 ActiveIntergenicRegion 0 25.65 20.17 6.23 12.46 11.64 6.06 4.25 3.79 0.87 5.29 6.51 13.83 4.73 4.69 7.60 4.57 3.12 0.87 3.01 3.01 1.04 1.97 3.21