Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FARS2 Gene 0 35.00 43.09 52.46 29.51 42.74 34.01 27.55 30.07 18.93 48.66 64.88 27.73 33.00 70.26 107.46 54.04 53.40 33.66 38.51 31.74 43.51 30.71 27.27 2 397563 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 274680 Transcript 0 5.64 0.00 0.00 0.00 2.68 1.83 0.00 1.73 0.00 0.00 0.00 0.00 0.00 0.00 2.90 0.00 0.00 0.00 0.00 0.00 3.67 0.00 0.00 4 324331 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 445533 Transcript 0 2.20 2.43 2.54 0.00 1.05 0.00 1.27 0.01 2.16 0.68 0.82 4.26 2.71 1.75 0.95 2.79 1.32 0.87 0.00 3.27 0.00 0.00 1.17 6 IG24 Intergenic 0 0.85 0.82 3.42 1.09 0.00 3.44 0.53 0.34 1.23 4.12 4.66 0.00 0.00 1.43 4.32 1.99 1.77 5.29 24.73 4.56 6.49 1.67 7.47 7 IG24_AR4 ActiveIntergenicRegion 0 0.95 0.91 3.82 1.22 0.00 3.84 0.59 0.39 1.38 4.60 5.20 0.00 0.00 1.60 4.52 2.22 1.97 5.91 27.63 5.09 7.25 1.87 8.34 8 ER1a ExonRegion 0 16.80 18.56 11.85 10.92 13.97 24.57 16.07 8.86 6.09 13.24 29.37 3.65 6.43 23.04 30.81 23.80 27.86 24.27 24.65 13.01 15.90 8.25 18.77 9 E1_Da NovelBoundary 0 3.78 36.97 7.57 4.53 0.00 17.43 0.00 7.35 4.63 3.76 2.68 0.00 6.82 2.12 5.69 7.09 4.39 15.42 9.41 8.69 0.00 0.00 3.41 10 E1a_E2a KnownJunction 0 10.08 5.59 9.20 1.76 12.48 2.90 8.44 14.54 5.03 15.58 44.75 0.00 0.00 11.77 36.34 32.73 34.78 13.68 0.00 9.46 3.15 9.55 3.33 11 I1_AR1 ActiveIntronRegion 0 1.11 19.99 9.00 6.80 10.94 12.89 5.99 10.54 4.90 7.04 10.13 1.91 7.37 7.31 10.18 5.72 10.35 9.24 21.12 12.25 3.27 3.47 5.37 12 I1_SR1 SilentIntronRegion 0 2.33 13.22 6.40 9.99 11.53 7.06 10.17 6.30 5.80 5.60 7.99 6.16 6.03 5.28 5.84 9.19 6.00 5.54 14.48 9.31 1.49 2.42 2.37 13 I1_AR2 ActiveIntronRegion 0 2.65 7.48 4.68 7.12 6.23 4.23 12.43 5.38 3.89 7.04 4.52 13.83 7.71 1.65 3.57 3.76 6.43 0.83 5.46 7.67 0.67 1.81 2.47 14 I1_AR4 ActiveIntronRegion 0 15.14 25.03 4.35 8.92 25.86 8.00 23.06 10.51 6.14 9.19 0.67 13.43 12.61 1.79 4.94 5.02 4.90 1.72 4.45 6.89 0.93 1.15 1.78 15 I1_SR4 SilentIntronRegion 0 14.58 22.30 4.00 8.97 27.16 5.88 19.74 9.96 4.65 6.60 1.64 12.72 18.39 2.35 4.64 6.17 3.51 3.65 4.15 6.13 0.47 0.89 0.65 16 I1_AR8 ActiveIntronRegion 0 4.14 2.03 2.10 4.15 17.92 0.00 7.14 3.38 2.15 4.39 1.39 7.44 12.23 7.94 5.23 3.94 3.44 4.50 1.25 5.74 4.74 0.00 14.24 17 ER2a ExonRegion 0 22.11 25.21 56.35 22.57 27.05 30.51 21.13 30.32 26.26 52.05 79.78 21.15 36.39 89.84 114.77 60.14 62.59 46.27 43.62 41.47 59.58 31.87 32.23 18 E2a_E3a KnownJunction 0 27.71 48.08 57.45 33.26 82.26 44.12 43.68 27.68 18.43 48.22 122.45 57.17 39.61 119.02 116.82 80.49 50.86 39.09 51.01 21.22 49.92 32.51 58.13 19 E2a_E4a NovelJunction 0 7.19 2.96 15.97 5.79 4.33 2.90 6.05 3.61 7.58 2.31 0.00 0.00 0.00 0.00 6.30 0.00 0.00 4.89 0.00 3.26 3.09 3.12 0.00 20 ER3a ExonRegion 0 73.85 59.49 79.25 50.10 69.99 56.58 46.79 40.28 21.00 72.14 112.42 52.93 55.87 123.49 169.16 103.19 81.59 49.31 60.88 39.14 67.31 42.87 45.76 21 E3a_E4a KnownJunction 0 107.43 75.64 76.19 49.14 57.72 30.61 53.53 46.95 25.58 75.83 113.03 50.87 56.33 116.72 210.27 93.39 96.03 43.94 48.47 51.26 53.56 74.40 56.60 22 ER4a ExonRegion 0 65.93 95.05 88.05 50.50 53.54 43.82 43.11 42.48 19.13 73.35 103.22 56.22 50.77 108.11 164.93 86.48 93.33 47.85 65.98 59.30 62.04 40.69 44.72 23 E4a_E5a KnownJunction 0 0.00 0.00 4.49 0.00 0.00 0.00 2.08 1.89 0.00 0.00 2.53 0.00 0.00 4.94 0.00 4.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24 E4a_E6a KnownJunction 0 72.75 171.75 77.94 67.72 87.35 62.80 65.27 44.69 20.08 71.91 82.28 79.83 60.87 82.64 185.55 80.32 115.38 40.71 57.70 69.54 70.36 46.17 32.61 25 E5_Aa NovelBoundary 0 0.00 0.00 1.69 2.83 3.23 0.00 8.92 1.60 1.53 1.50 5.26 13.95 6.82 0.00 0.00 3.33 0.00 0.00 0.00 0.00 0.00 0.00 3.33 26 ER5a ExonRegion 0 3.02 0.00 4.64 0.00 0.19 0.00 1.32 1.73 0.35 0.00 1.93 1.55 4.36 4.41 0.00 2.97 0.00 1.85 0.00 1.06 0.00 0.60 0.00 27 ER5b ExonRegion 0 2.20 2.43 2.54 0.00 1.05 0.00 1.27 0.01 2.16 0.68 0.82 4.26 2.71 1.75 0.95 2.79 1.32 0.87 0.00 3.27 0.00 0.00 1.17 28 I5_AR5 ActiveIntronRegion 0 21.56 11.31 5.12 3.31 16.26 1.56 7.93 10.11 1.62 7.45 1.11 9.36 3.11 0.85 7.33 11.96 3.96 8.06 2.07 0.51 1.18 0.26 7.42 29 I5_AR7 ActiveIntronRegion 0 12.58 2.43 2.22 3.45 8.81 0.13 4.50 2.51 1.82 2.67 0.81 4.80 6.89 0.71 3.98 2.87 3.18 0.47 1.71 1.57 0.28 0.96 0.81 30 ER6a ExonRegion 0 51.20 102.75 77.55 63.76 109.02 69.67 66.51 51.56 22.17 73.26 80.62 59.08 73.50 100.47 158.34 85.99 83.20 46.87 66.14 50.14 54.56 54.75 41.77 31 E6a_E7a KnownJunction 0 108.17 136.95 134.77 101.55 95.84 70.75 68.98 83.71 50.00 99.66 99.87 94.83 73.21 129.97 262.44 120.40 125.48 50.78 138.83 52.67 54.67 89.65 62.06 32 ER7a ExonRegion 0 99.42 106.72 103.62 61.50 109.32 62.49 52.33 68.92 37.37 93.21 89.37 60.38 53.84 88.74 184.53 79.05 71.32 33.64 54.07 40.30 58.50 56.15 30.29 33 E7_Da NovelBoundary 0 20.00 3.29 8.66 9.46 3.23 0.00 17.67 11.95 6.25 21.73 0.00 0.00 13.47 0.00 0.00 3.42 8.79 2.57 0.00 6.46 3.09 0.00 0.00 34 E7a_E8a KnownJunction 0 104.98 134.84 113.15 67.02 156.62 68.09 58.29 62.64 43.69 85.23 72.54 55.97 74.67 84.47 258.36 71.61 74.52 17.24 75.48 29.47 72.28 86.95 37.22 35 I7_SR1 SilentIntronRegion 0 25.77 15.72 8.01 7.73 20.22 4.13 15.66 6.69 3.29 8.78 0.89 3.64 5.68 0.62 5.80 4.12 5.71 3.13 6.25 4.17 1.02 0.85 2.54 36 I7_AR1 ActiveIntronRegion 0 17.24 40.19 15.85 10.57 18.93 2.45 17.50 11.01 5.90 11.87 0.26 1.77 13.33 1.38 4.44 11.51 2.20 2.58 4.68 5.40 2.35 2.50 2.35 37 I7_AR6 ActiveIntronRegion 0 2.50 2.34 1.26 3.03 8.00 1.37 8.69 6.11 2.25 5.24 0.00 7.43 15.17 1.55 1.05 2.53 6.00 0.59 3.05 6.80 0.32 1.37 0.06 38 I7_AR7 ActiveIntronRegion 1 1.63 2.82 3.68 1.36 2.68 1.83 14.77 6.91 2.47 4.59 0.00 4.33 19.48 0.00 0.00 0.00 0.00 0.00 0.00 4.42 0.00 0.00 2.94 39 I7_AR8 ActiveIntronRegion 1 2.12 3.94 3.83 1.36 4.18 1.83 16.14 8.64 2.01 3.94 0.00 1.89 24.33 0.00 0.00 0.00 0.00 0.00 0.00 5.98 0.00 0.00 2.94 40 I7_AR9 ActiveIntronRegion 1 6.16 4.07 6.13 1.36 14.35 1.67 18.54 5.50 4.04 3.44 0.00 4.33 23.45 0.00 0.00 0.00 3.30 0.00 0.00 8.51 0.00 0.00 0.00 41 I7_AR25 ActiveIntronRegion 0 34.13 10.95 11.37 11.87 15.74 2.51 8.82 10.98 5.34 13.08 0.43 5.06 3.69 1.75 8.86 3.66 2.73 5.39 3.08 2.60 2.23 0.93 1.45 42 I7_AR27 ActiveIntronRegion 0 15.48 0.00 1.81 2.51 14.32 1.46 5.03 10.25 1.32 1.77 0.00 3.31 2.97 0.00 3.15 4.83 9.18 3.72 2.51 1.73 0.88 0.00 1.15 43 ER8a ExonRegion 0 20.65 29.67 40.52 22.61 36.94 17.06 14.66 23.58 12.48 41.97 37.03 18.33 14.99 39.07 97.85 25.98 27.12 10.11 13.05 13.54 24.13 29.55 10.84 44 ER8b ExonRegion 0 5.64 0.00 0.00 0.00 2.68 1.83 0.00 1.73 0.00 0.00 0.00 0.00 0.00 0.00 2.90 0.00 0.00 0.00 0.00 0.00 3.67 0.00 0.00