Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RIOK1 Gene 0 83.70 153.05 76.62 94.14 113.83 68.10 82.90 72.20 49.53 212.06 149.62 132.09 138.36 109.88 108.96 106.86 124.19 41.86 38.29 75.22 44.40 66.37 40.30 2 379834 Transcript 0 47.60 106.72 42.90 46.45 49.15 23.85 31.34 39.27 27.57 140.40 88.22 69.40 95.69 90.59 84.05 45.84 101.73 35.92 14.58 59.19 39.35 36.75 17.07 3 475351 Transcript 0 25.49 22.46 11.35 4.74 9.63 13.19 6.53 10.50 11.46 33.71 11.95 13.25 25.29 12.31 13.73 18.10 20.90 11.49 7.37 12.60 5.92 6.29 0.53 4 264874 Transcript 1 31.50 21.79 9.32 28.18 11.07 9.49 20.73 17.23 13.93 24.34 13.85 38.67 31.36 13.20 8.96 15.47 15.44 5.53 4.90 8.70 3.63 11.54 12.29 5 484626 Transcript 0 11.26 23.20 10.40 13.78 16.48 7.17 13.54 10.31 8.65 30.67 25.19 17.76 18.78 11.26 16.66 16.77 20.84 7.43 4.88 9.65 4.52 10.50 5.05 6 493691 Transcript 0 13.20 24.06 12.26 16.45 18.56 7.61 13.72 7.88 7.90 29.44 16.88 9.31 18.46 11.85 13.49 14.49 15.26 6.15 7.84 16.25 6.48 9.72 4.40 7 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.23 0.00 0.00 0.68 2.04 0.00 0.00 1.01 2.45 1.53 0.56 0.05 0.55 0.00 0.00 1.43 0.00 8 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.38 2.00 0.00 0.00 2.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER1b ExonRegion 1 17.57 33.01 27.33 24.99 23.98 32.20 31.51 19.69 23.90 144.51 99.26 13.70 27.05 103.79 66.20 181.13 99.97 52.10 48.16 58.88 44.79 47.07 78.05 10 E1a_E2a KnownJunction 1 29.63 32.89 33.80 59.23 42.44 19.99 19.87 61.98 26.59 232.57 122.93 48.62 116.06 164.58 94.32 195.68 93.50 153.67 25.98 113.90 33.85 28.72 65.05 11 ER2a ExonRegion 0 39.02 113.24 51.54 60.88 84.68 83.29 98.91 58.34 49.53 220.77 200.06 90.90 138.78 156.49 88.58 113.46 188.30 74.04 25.51 91.17 75.99 56.18 39.88 12 E2a_E3a KnownJunction 0 25.26 22.23 7.92 3.33 8.32 14.82 3.75 10.31 9.66 29.79 9.42 6.30 27.27 6.95 8.90 11.71 17.30 11.73 8.94 8.63 6.30 5.88 0.00 13 E2a_E3b KnownJunction 0 95.20 213.45 85.80 92.90 98.30 47.70 62.45 78.53 55.15 280.12 174.41 138.80 191.38 180.18 165.65 90.15 202.90 71.80 28.61 118.37 78.70 72.07 34.15 14 ER3a ExonRegion 0 25.72 22.68 14.78 6.15 10.95 11.56 9.31 10.68 13.25 37.64 14.47 20.20 23.31 17.67 18.55 24.50 24.51 11.25 5.79 16.57 5.54 6.69 1.07 15 E3_Ab KnownBoundary 0 36.01 15.13 20.64 4.93 14.09 8.74 19.65 17.99 19.62 38.63 7.11 18.16 13.64 14.24 30.29 27.17 13.74 6.22 9.60 23.20 0.00 0.00 0.00 16 ER3b ExonRegion 0 76.15 126.26 100.28 113.21 109.47 68.07 74.52 99.23 70.61 299.44 266.93 175.63 166.34 200.94 109.89 152.04 214.04 58.25 39.18 110.85 79.53 84.04 44.80 17 E3a_E4a KnownJunction 0 57.71 102.15 102.36 118.53 170.88 69.45 127.72 92.38 45.23 323.53 334.08 176.76 289.27 183.59 141.17 111.08 214.68 41.12 33.04 111.09 49.79 101.40 48.06 18 ER4a ExonRegion 0 61.63 160.98 99.92 112.38 169.54 89.12 143.44 105.33 66.72 304.50 265.93 249.90 341.43 209.09 131.95 139.45 211.72 39.65 34.27 117.06 44.60 103.59 45.34 19 E4a_E5a KnownJunction 0 67.20 220.09 110.29 127.29 196.35 75.92 164.77 130.37 73.47 283.80 256.22 254.03 401.76 188.89 210.89 132.44 195.32 40.46 48.94 131.80 43.49 112.73 74.01 20 ER4b ExonRegion 0 58.84 201.63 112.92 131.25 176.87 85.18 150.60 126.09 82.01 299.57 240.45 274.70 344.48 212.76 186.41 141.47 193.10 44.16 46.51 128.19 40.11 108.55 65.19 21 ER5a ExonRegion 0 59.75 226.82 117.27 139.33 153.08 83.84 139.85 117.98 69.54 300.60 240.26 209.43 313.90 174.05 155.52 133.47 212.33 40.31 44.08 95.50 44.43 104.81 50.95 22 E5a_E6a KnownJunction 0 89.28 270.02 107.36 133.25 204.92 93.92 157.22 90.36 57.06 273.70 241.75 168.20 259.24 174.94 111.38 127.83 241.23 24.42 49.88 91.91 37.25 108.32 35.43 23 ER6a ExonRegion 0 65.27 247.75 112.11 147.32 139.25 76.55 109.08 117.65 86.43 312.39 289.44 253.25 302.03 143.69 105.57 113.36 200.25 33.24 38.77 97.37 43.41 99.43 38.05 24 E6a_E7a KnownJunction 0 147.14 457.16 117.74 164.35 134.89 82.23 144.99 107.66 81.39 304.88 280.02 252.53 399.81 196.30 181.84 158.33 201.50 38.47 60.43 133.01 57.21 110.53 50.62 25 ER7a ExonRegion 0 115.72 375.76 119.01 156.49 217.02 112.67 168.13 115.91 84.08 344.03 239.25 329.88 396.54 147.72 154.00 139.87 177.58 29.68 47.08 111.64 41.54 125.95 51.85 26 E7_Da KnownBoundary 0 36.23 33.22 5.50 23.74 24.87 0.00 15.85 20.87 11.49 24.04 14.79 36.76 26.46 12.01 4.45 12.56 16.92 0.00 4.80 0.00 8.77 14.63 4.18 27 E7a_E7b KnownJunction 1 116.02 345.66 121.79 163.75 182.77 88.87 166.76 106.26 84.14 347.16 205.42 291.24 367.35 130.26 135.86 149.70 188.31 15.88 59.30 119.33 27.86 153.21 44.39 28 ER7b ExonRegion 1 31.50 21.79 9.32 28.18 11.07 9.49 20.73 17.23 13.93 24.34 13.85 38.67 31.36 13.20 8.96 15.47 15.44 5.53 4.90 8.70 3.63 11.54 12.29 29 E7_Ab KnownBoundary 1 58.16 11.18 3.99 22.44 21.22 9.43 33.61 9.49 10.45 19.45 17.58 57.47 51.94 7.00 9.64 16.15 32.35 6.72 12.42 14.25 0.00 17.70 21.77 30 E7_Db KnownBoundary 1 116.47 325.93 121.17 207.80 188.96 138.27 158.50 122.15 94.15 328.07 187.47 460.05 277.42 137.44 140.92 138.25 165.22 44.77 51.39 150.40 44.54 113.59 65.81 31 ER7c ExonRegion 1 112.11 292.51 114.75 191.90 167.36 120.68 156.78 121.38 93.11 343.52 198.40 441.05 357.96 128.62 126.06 154.45 199.01 41.13 57.64 137.47 38.17 135.63 64.04 32 ER7d ExonRegion 0 105.91 289.06 119.34 183.41 194.24 106.85 137.10 123.36 91.52 345.99 258.81 324.00 261.30 139.28 167.03 161.28 202.10 47.21 61.50 136.78 55.41 126.07 69.22 33 E7c_E8b KnownJunction 0 95.65 267.78 131.63 172.34 229.37 102.61 150.73 125.52 100.06 389.61 313.71 250.28 218.82 127.38 206.44 209.26 252.55 56.00 78.78 127.71 56.16 117.38 63.60 34 ER8a ExonRegion 0 12.43 33.30 17.31 22.66 27.09 13.52 18.87 14.91 11.89 49.60 42.04 31.93 31.66 21.11 26.11 26.75 33.42 7.85 8.76 16.49 7.99 18.75 6.97 35 ER8b ExonRegion 0 104.20 298.91 129.55 176.38 178.90 101.22 124.59 111.36 88.30 349.53 273.24 346.41 323.83 154.90 159.30 208.60 235.90 81.69 71.97 137.26 65.88 162.05 67.03 36 E8a_E9a KnownJunction 0 156.99 441.04 146.62 184.13 189.56 122.03 146.71 127.99 89.38 350.23 220.90 287.64 360.20 162.64 174.42 242.84 151.66 107.07 80.94 154.30 90.81 143.84 92.96 37 ER9a ExonRegion 0 125.52 334.33 106.90 145.17 169.85 103.93 121.05 112.36 85.02 336.18 278.21 268.71 192.80 201.05 157.76 183.45 219.63 105.88 73.36 134.38 107.61 109.38 71.08 38 E9a_E10a KnownJunction 0 119.13 327.05 128.82 164.31 158.06 112.21 95.88 102.69 91.55 377.33 199.42 239.18 146.74 246.51 197.42 199.35 153.44 118.35 95.81 161.65 131.89 131.28 97.48 39 ER10a ExonRegion 0 161.20 311.57 125.13 148.57 178.14 110.57 118.18 103.16 79.58 354.61 236.30 183.79 234.19 223.36 193.66 226.88 211.45 120.74 78.81 143.88 127.03 96.30 74.63 40 E10_Da KnownBoundary 0 13.78 12.43 11.80 5.66 0.00 2.90 23.36 11.21 1.65 12.71 9.42 18.61 0.00 4.89 8.90 3.93 0.00 10.86 0.00 2.68 9.39 3.12 7.94 41 E10a_E11a KnownJunction 0 195.37 316.72 116.17 172.91 227.59 95.85 103.03 80.59 47.48 272.33 228.01 229.57 147.39 254.99 245.63 174.06 215.71 58.57 42.73 169.38 72.46 108.87 56.08 42 ER10b ExonRegion 0 10.09 13.10 3.49 4.91 5.86 0.82 8.21 5.72 5.41 11.74 8.34 3.59 5.90 1.41 7.21 6.78 8.26 7.01 1.00 2.81 1.05 2.25 3.12 43 ER11a ExonRegion 0 173.97 295.88 122.59 164.31 177.15 92.96 127.13 101.20 79.81 333.48 231.30 159.70 197.55 207.87 170.06 179.94 225.76 107.29 57.60 150.61 96.10 93.15 68.48 44 E11a_E12b KnownJunction 0 203.07 289.42 139.76 195.58 140.58 114.03 109.97 115.95 87.07 284.82 211.69 148.70 152.26 158.75 178.75 172.69 173.07 55.30 62.68 134.48 64.25 92.71 77.60 45 ER12a ExonRegion 0 20.93 35.70 16.07 21.96 17.54 12.43 16.33 13.64 11.53 39.25 28.35 14.43 21.89 20.21 21.28 22.46 25.31 11.50 10.26 19.39 12.00 11.34 8.81 46 ER12b ExonRegion 0 171.96 297.78 163.88 183.59 188.58 169.73 170.10 133.84 73.38 322.77 253.77 168.85 198.35 162.66 227.99 155.28 263.46 46.39 63.51 143.08 92.96 100.78 68.49 47 E12a_E13a KnownJunction 0 223.30 329.74 177.34 179.56 323.34 225.72 219.75 145.44 67.30 327.23 211.16 191.76 216.87 173.52 250.20 205.84 241.89 47.67 58.17 154.30 79.38 123.63 96.89 48 ER13a ExonRegion 0 227.81 325.93 171.99 226.74 300.91 169.49 175.50 127.23 74.44 355.53 236.26 220.84 258.26 177.81 219.89 223.73 183.56 78.04 88.63 119.25 54.47 104.56 81.79 49 E13_Da KnownBoundary 0 6.22 8.49 28.74 21.61 3.65 2.90 20.93 1.97 1.53 32.80 7.53 5.85 41.23 0.00 0.00 0.00 13.00 0.00 3.58 26.08 0.00 13.53 0.00 50 E13a_E14a KnownJunction 0 235.82 376.31 194.76 220.35 165.11 107.10 181.73 121.33 76.27 376.31 286.23 246.08 217.03 224.44 251.56 188.41 267.60 75.36 128.66 127.58 39.48 167.04 77.85 51 ER13b ExonRegion 0 5.47 12.43 8.46 10.94 19.58 2.78 11.12 2.12 4.28 19.64 5.42 4.18 15.04 3.49 5.70 6.53 5.21 0.81 5.41 13.11 0.97 8.10 0.00 52 ER14a ExonRegion 0 145.45 304.32 133.47 134.47 137.95 111.59 132.79 119.10 71.16 362.12 279.30 225.29 176.40 170.65 203.73 130.88 251.48 63.44 73.38 106.97 87.25 99.39 54.11 53 E14a_E15a KnownJunction 0 187.74 344.94 112.53 93.10 165.45 151.96 138.76 100.59 58.68 310.47 219.42 127.39 111.03 128.32 168.61 120.22 150.72 55.84 49.41 96.77 98.10 65.21 48.83 54 I14 Intron 0 21.24 38.20 13.02 29.81 32.62 10.64 16.74 14.10 9.31 38.26 8.01 11.11 18.26 5.22 8.73 6.78 7.80 2.71 1.98 9.09 1.37 11.49 3.90 55 I14_SR1 SilentIntronRegion 0 9.62 15.28 5.92 15.28 31.50 11.86 13.32 9.18 3.70 27.72 8.16 13.64 13.64 5.04 7.54 5.41 3.95 1.81 0.84 5.50 1.17 8.89 2.80 56 I14_AR1 ActiveIntronRegion 0 27.64 54.02 17.47 40.63 34.13 10.05 18.83 17.78 13.67 46.17 7.99 9.00 21.61 5.43 9.40 7.20 9.99 3.07 2.74 11.50 1.18 13.72 4.28 57 I14_SR2 SilentIntronRegion 0 39.74 46.34 19.49 28.39 28.10 8.64 20.85 13.67 7.09 37.50 7.68 14.13 19.01 4.85 10.84 12.12 13.38 5.37 2.64 10.95 4.44 9.05 7.69 58 E15_Aa NovelBoundary 0 43.71 78.74 29.72 24.94 30.73 14.14 17.89 26.90 11.26 56.97 12.21 5.55 0.00 2.24 0.00 3.67 3.65 3.23 4.52 8.69 5.19 8.94 0.00 59 ER15a ExonRegion 0 213.84 279.24 157.67 177.09 244.24 137.09 155.09 124.15 78.33 361.56 203.55 205.55 213.29 171.30 219.76 160.15 161.79 65.59 75.20 98.58 80.05 95.39 69.35 60 E15a_E16a KnownJunction 0 247.15 240.15 132.90 130.92 367.40 134.18 204.74 91.27 80.79 306.47 211.16 127.84 184.73 187.95 259.84 141.59 140.07 50.61 81.98 129.18 86.36 112.73 67.61 61 ER16a ExonRegion 0 97.81 113.70 81.00 95.12 126.13 63.29 76.20 86.31 49.71 208.92 117.25 115.56 98.31 79.64 121.14 62.13 82.85 16.94 29.34 61.62 23.06 64.24 21.87