Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 GPLD1 Gene 0 7.80 21.71 21.48 17.63 5.89 21.23 7.19 11.85 23.08 10.43 8.27 3.77 5.01 3.07 2.47 3.15 5.62 8.57 7.11 20.81 0.48 2.73 1.40 2 474784 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 475417 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 230036 Transcript 0 7.83 28.32 27.13 20.57 5.42 27.00 9.14 14.33 29.62 12.04 10.47 6.15 5.60 4.08 1.89 4.56 6.40 13.73 9.29 29.59 0.38 3.23 1.20 5 486892 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 378243 Transcript 0 2.36 8.38 8.96 3.18 3.16 5.70 3.12 4.09 3.09 2.49 0.28 0.00 1.38 0.20 0.65 0.00 0.00 1.21 0.00 1.50 0.00 0.31 0.00 7 492917 Transcript 0 3.45 5.18 15.65 21.63 5.35 5.31 3.30 15.58 10.75 11.34 1.29 2.38 1.15 2.10 2.57 4.91 0.24 6.19 3.50 0.21 1.74 1.75 1.38 8 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER1b ExonRegion 0 0.47 1.31 0.35 1.49 0.00 2.75 0.58 0.88 1.91 0.89 1.78 0.00 0.00 0.29 0.45 0.00 0.00 1.35 0.00 1.76 0.00 0.38 0.00 10 E1a_E2d KnownJunction 0 0.00 0.00 0.00 1.90 0.00 2.27 0.00 8.30 9.61 5.72 9.69 0.00 0.00 0.00 0.00 0.00 0.00 7.09 0.00 13.36 0.00 2.45 0.00 11 ER2a ExonRegion 0 0.00 0.60 2.53 0.96 0.00 1.17 0.00 1.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E2_Ab KnownBoundary 0 0.00 0.00 1.83 1.60 0.00 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 E2_Ac KnownBoundary 0 0.00 3.35 3.67 3.50 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER2b ExonRegion 0 0.00 4.07 3.68 2.73 0.00 1.83 0.00 1.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 ER2c ExonRegion 0 0.00 2.03 2.91 3.06 0.00 0.40 1.82 1.31 1.50 1.21 0.16 0.00 0.00 0.00 2.82 0.00 0.00 0.07 0.00 0.17 0.00 0.03 0.00 16 E2_Ad KnownBoundary 0 0.00 0.00 1.36 1.80 0.00 0.00 0.00 3.61 6.31 3.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER2d ExonRegion 0 2.17 5.18 2.82 8.21 1.66 13.71 2.29 6.07 20.20 9.16 12.59 1.21 0.86 2.00 2.65 0.29 0.00 7.01 2.56 13.67 0.00 0.20 1.83 18 E2a_E3a KnownJunction 0 3.63 15.33 7.84 12.89 0.00 16.13 1.85 2.55 10.04 4.67 16.16 0.00 6.82 2.47 5.32 3.33 0.00 4.60 4.05 17.90 0.00 0.00 0.00 19 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER3a ExonRegion 0 0.68 16.89 6.08 16.23 0.00 15.75 3.71 5.09 19.21 8.29 13.77 1.47 7.96 1.86 5.08 2.28 3.01 2.11 8.93 26.94 0.00 0.93 5.35 21 E3a_E4a KnownJunction 0 0.00 9.14 3.25 12.45 0.00 5.39 6.32 6.49 19.44 12.54 12.69 0.00 12.66 2.30 10.51 0.00 0.00 1.91 8.56 25.95 0.00 3.12 0.00 22 ER4a ExonRegion 0 1.37 10.19 7.60 11.80 4.57 19.27 4.61 6.83 23.50 10.67 16.59 2.85 0.95 2.61 4.00 0.00 5.35 7.02 2.90 26.88 1.42 5.67 0.41 23 E4a_E5a KnownJunction 0 0.00 11.77 14.01 23.61 11.04 20.05 2.08 8.63 24.74 11.26 14.48 13.80 0.00 2.47 0.00 0.00 18.23 6.76 3.95 29.72 0.00 2.82 3.59 24 ER5a ExonRegion 0 2.20 18.32 12.33 19.68 7.29 19.46 2.85 8.36 23.49 6.44 16.84 3.40 7.18 3.46 1.92 1.64 7.44 16.71 4.97 30.61 1.15 3.91 4.26 25 E5a_E6a KnownJunction 0 0.00 10.98 8.49 17.25 3.65 11.53 2.25 4.07 19.10 10.64 18.27 0.00 6.82 0.00 6.30 3.33 9.07 18.41 8.66 32.34 2.41 3.12 0.00 26 ER6a ExonRegion 0 0.97 10.11 12.75 16.97 2.72 14.11 4.56 10.03 28.85 10.44 14.75 6.79 9.38 4.23 5.59 1.29 7.82 10.60 9.10 30.17 2.03 6.61 0.00 27 E6a_E7a KnownJunction 0 0.00 12.89 11.71 19.28 0.00 26.92 7.82 11.95 24.94 6.02 9.37 0.00 0.00 7.06 4.45 0.00 0.00 6.05 0.00 48.07 0.00 5.51 0.00 28 ER7a ExonRegion 0 5.01 31.29 13.65 17.08 8.68 13.10 4.43 6.42 22.23 7.49 11.60 5.74 3.73 4.44 3.97 1.82 3.44 14.71 1.30 29.22 1.80 5.70 0.00 29 E7_Da KnownBoundary 0 0.00 15.46 5.03 3.36 3.82 0.00 1.68 2.01 7.73 3.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.69 3.15 2.39 0.00 30 E7a_E8a KnownJunction 0 9.63 38.94 10.14 8.96 8.32 12.38 3.84 4.35 18.32 4.24 11.58 6.45 0.00 2.47 0.00 4.36 0.00 18.86 7.25 29.98 2.84 0.00 0.00 31 ER7b ExonRegion 0 4.15 14.47 4.45 7.47 2.33 0.44 2.07 4.74 5.18 2.39 0.51 1.87 0.00 0.00 1.17 0.00 0.00 0.26 0.00 6.05 0.87 1.18 0.00 32 E7_Db KnownBoundary 0 3.78 12.10 5.91 10.65 0.00 0.00 0.00 4.93 4.48 4.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.11 0.00 2.68 0.00 0.00 0.00 33 ER7c ExonRegion 0 2.36 8.38 8.96 3.18 3.16 5.70 3.12 4.09 3.09 2.49 0.28 0.00 1.38 0.20 0.65 0.00 0.00 1.21 0.00 1.50 0.00 0.31 0.00 34 E8_Aa NovelBoundary 0 0.00 18.62 0.00 11.09 0.00 21.58 8.35 4.48 13.45 1.32 0.00 0.00 0.00 2.12 0.00 0.00 0.00 0.00 0.00 6.01 0.00 2.57 0.00 35 ER8a ExonRegion 0 1.42 20.45 11.10 6.17 1.17 20.61 6.04 8.71 28.27 7.99 15.15 3.15 13.73 2.04 1.42 5.51 6.54 10.35 12.28 33.50 1.44 1.70 2.72 36 E8a_E9a KnownJunction 0 0.00 34.86 7.86 5.69 0.00 22.71 3.44 11.91 39.90 11.28 9.21 0.00 6.82 2.35 6.30 4.36 9.26 0.00 4.42 43.85 0.00 2.27 0.00 37 ER9a ExonRegion 0 4.80 32.99 20.63 19.29 1.96 31.92 10.27 13.32 40.79 17.66 15.39 7.94 12.90 6.23 4.70 0.96 7.98 4.60 7.11 26.00 0.00 3.80 0.76 38 E9_Da NovelBoundary 0 10.45 6.38 3.43 5.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 0.00 0.00 0.00 39 E9a_E10a KnownJunction 0 7.41 40.78 26.34 19.98 7.30 37.76 12.81 16.96 32.23 14.05 14.74 12.30 24.84 4.83 15.95 3.85 9.16 14.05 17.69 11.95 0.00 2.69 4.35 40 E10a_E11a KnownJunction 0 14.45 33.68 26.34 36.29 12.90 23.00 16.30 22.43 34.03 14.77 30.59 6.30 13.47 7.06 6.30 8.72 8.51 4.56 0.00 33.43 0.00 3.12 8.71 41 ER10a ExonRegion 0 10.73 34.57 32.65 32.03 12.61 28.62 13.10 27.72 42.88 18.19 26.85 12.52 11.56 6.38 8.91 8.70 12.50 12.27 8.87 24.85 0.00 3.05 8.29 42 ER11a ExonRegion 0 5.60 20.86 26.31 26.42 4.98 27.18 10.23 20.09 40.57 18.69 19.17 14.66 17.32 3.98 3.30 6.26 6.58 8.52 5.27 26.05 0.00 3.81 2.30 43 E11_Da NovelBoundary 0 2.59 19.14 13.63 13.68 3.99 19.31 4.15 18.15 24.62 12.38 11.21 18.16 13.64 0.00 0.00 4.36 0.00 7.30 4.42 7.99 0.00 0.00 0.00 44 E11b_E12a KnownJunction 0 14.00 44.66 34.48 31.03 3.82 36.57 6.49 18.24 47.92 14.59 23.48 31.51 15.10 7.36 5.19 0.00 4.77 12.15 9.41 20.33 0.00 2.63 3.84 45 ER11b ExonRegion 0 10.98 32.03 30.17 25.72 2.68 34.61 7.45 20.31 46.24 17.42 24.77 32.20 16.42 4.87 5.80 0.00 3.30 9.24 9.76 17.15 0.00 1.56 3.30 46 ER12a ExonRegion 0 13.66 51.02 30.93 21.19 2.35 39.18 8.02 10.71 40.57 18.78 17.13 10.10 10.73 6.82 2.86 5.18 5.25 8.82 11.29 27.98 0.00 2.05 3.74 47 E12a_E13a KnownJunction 0 0.00 28.22 26.23 16.41 12.05 18.91 15.85 10.10 26.22 18.62 12.06 6.30 6.82 2.12 0.00 4.36 4.77 8.87 13.84 24.03 0.00 5.39 0.00 48 ER13a ExonRegion 0 5.11 30.60 25.78 18.33 10.24 30.87 14.09 15.90 31.09 16.86 15.06 11.74 10.27 2.85 2.97 6.68 5.95 13.58 8.40 28.73 0.93 6.34 1.53 49 E13a_E14a KnownJunction 0 3.33 27.56 10.23 9.42 3.48 29.70 6.54 6.28 23.12 13.54 15.32 11.85 6.17 2.47 0.00 4.36 3.55 16.00 4.71 5.82 0.00 2.45 3.67 50 E14_Aa NovelBoundary 0 3.78 19.08 4.05 18.55 0.00 0.00 0.00 6.78 8.56 1.50 0.00 0.00 0.00 0.00 0.00 0.00 8.32 0.00 4.80 3.26 0.00 0.00 0.00 51 ER14a ExonRegion 0 4.64 25.36 18.52 15.22 3.17 31.27 6.89 14.53 27.08 13.30 15.70 5.13 6.87 2.83 4.04 0.85 5.94 13.87 8.33 25.43 0.80 2.69 0.82 52 E14a_E15a KnownJunction 0 3.33 18.15 19.84 9.19 4.33 10.45 10.47 14.50 24.77 14.13 13.48 6.30 8.28 2.47 0.00 3.76 4.02 16.71 3.86 30.04 0.00 8.51 0.00 53 ER15a ExonRegion 0 3.44 14.80 13.43 11.01 0.90 18.10 5.69 6.15 17.89 7.43 4.43 3.61 3.96 2.88 2.16 2.42 4.02 12.61 4.60 18.16 0.00 4.21 0.80 54 E15a_E16a KnownJunction 0 2.89 11.45 10.94 15.08 3.82 16.07 2.25 14.01 25.46 8.46 5.11 0.00 6.33 7.06 4.45 4.19 7.85 20.40 13.08 46.53 0.00 2.51 0.00 55 ER16a ExonRegion 0 2.36 11.93 17.33 13.47 3.11 7.43 5.02 6.28 16.96 7.26 4.23 0.00 1.44 2.84 0.52 2.49 2.85 10.65 5.74 24.09 0.00 1.11 0.00 56 E16a_E17a KnownJunction 0 7.04 29.60 18.27 19.51 3.57 17.66 3.49 7.31 21.99 4.41 10.42 0.00 0.00 2.47 0.00 12.39 8.70 12.02 8.38 27.23 0.00 2.39 0.00 57 ER17a ExonRegion 0 13.74 34.71 19.18 18.26 2.78 27.58 9.20 12.31 27.83 8.95 14.46 2.08 2.56 2.62 2.94 10.78 8.71 19.71 10.75 36.14 3.00 5.92 2.00 58 E17a_E18a KnownJunction 0 13.04 37.03 21.08 18.85 3.74 40.83 13.07 14.70 25.95 11.55 2.68 0.00 0.00 4.59 0.00 4.36 0.00 15.79 9.22 55.74 0.00 8.14 0.00 59 ER18a ExonRegion 0 8.56 23.48 23.83 17.93 2.90 29.12 7.29 15.50 23.87 9.21 7.20 0.99 2.54 2.72 2.46 6.78 4.50 19.85 11.00 31.58 1.43 1.83 0.00 60 E18_Da NovelBoundary 0 0.00 3.09 11.68 1.90 0.00 17.43 0.00 4.11 6.80 7.12 0.00 0.00 0.00 0.00 4.45 0.00 0.00 2.57 0.00 8.44 0.00 0.00 0.00 61 E18a_E19a KnownJunction 0 2.82 31.05 27.73 20.11 10.95 7.84 3.53 15.16 27.29 4.62 0.00 0.00 0.00 6.77 0.00 4.36 3.83 20.89 4.80 42.31 0.00 2.76 0.00 62 E19_Aa NovelBoundary 0 6.89 6.38 13.54 20.14 0.00 2.44 0.00 0.00 10.56 4.14 0.00 18.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 63 ER19a ExonRegion 0 5.23 22.90 27.10 22.80 3.39 17.92 7.53 20.07 31.90 7.83 7.85 8.48 3.53 3.53 0.45 5.15 5.97 10.28 6.42 25.43 0.00 0.48 1.30 64 E19a_E20a KnownJunction 0 0.00 39.73 53.16 29.10 7.89 38.73 18.50 7.89 25.69 6.02 7.26 6.30 6.49 2.47 0.00 7.86 4.02 22.38 17.98 33.24 0.00 3.06 4.10 65 ER20a ExonRegion 0 10.60 29.35 37.93 27.09 4.82 24.76 12.39 19.68 30.56 8.62 10.87 5.15 2.70 2.22 0.71 3.93 11.09 12.99 8.83 28.22 0.00 0.63 1.08 66 E20a_E21a KnownJunction 0 6.67 33.88 31.37 29.90 3.65 23.34 12.50 13.14 27.37 14.77 14.79 6.30 0.00 7.42 4.45 0.00 9.26 5.76 9.32 36.62 0.00 0.00 0.00 67 ER21a ExonRegion 0 6.10 33.16 30.93 30.64 11.53 36.03 5.51 12.67 36.07 11.53 11.64 2.53 4.64 5.39 4.94 5.94 7.62 11.66 7.83 31.87 0.00 0.95 1.59 68 E21a_E22a KnownJunction 0 10.59 30.19 27.47 27.00 7.64 42.87 12.37 9.00 34.20 19.21 9.37 0.00 0.00 2.47 0.00 8.46 4.77 25.25 4.80 25.25 0.00 2.39 0.00 69 ER22a ExonRegion 0 9.61 15.44 39.14 20.55 3.63 29.21 8.07 24.31 40.58 14.47 10.61 6.46 5.64 5.54 3.29 7.09 9.96 11.71 7.61 34.33 0.00 3.38 1.69 70 E22a_E23a KnownJunction 0 22.30 23.88 36.99 27.57 0.00 11.19 8.04 20.70 48.87 11.98 9.63 0.00 15.10 7.00 0.00 0.00 9.26 8.00 11.58 47.04 0.00 5.27 0.00 71 ER23a ExonRegion 0 15.00 37.98 49.07 25.40 10.34 37.94 12.70 25.93 41.50 17.16 10.99 3.93 5.19 6.53 2.18 12.11 12.38 17.25 18.54 35.68 0.96 5.93 0.93 72 E23a_E25b KnownJunction 0 0.00 29.01 31.28 16.22 7.98 56.67 17.27 23.70 17.79 14.83 4.95 6.30 6.66 2.47 0.00 0.00 13.56 17.99 16.28 36.24 3.09 3.12 0.00 73 E24_Aa NovelBoundary 0 15.11 16.77 8.84 5.63 8.40 2.21 0.00 0.00 0.00 1.53 0.00 0.00 0.00 0.00 4.45 4.36 0.00 0.00 0.00 3.26 3.15 3.12 0.00 74 ER24a ExonRegion 0 1.20 1.21 0.00 0.38 0.00 0.24 0.98 0.00 0.00 0.00 0.70 4.08 3.47 2.42 12.19 1.12 0.00 0.00 0.05 0.06 0.00 1.24 1.62 75 E24_Da NovelBoundary 0 97.87 147.21 526.62 598.92 121.39 107.72 172.72 619.89 505.03 443.46 25.59 0.00 15.26 17.31 53.28 94.51 79.85 506.02 96.29 104.70 85.75 39.31 52.58 76 E24a_E25a KnownJunction 0 12.59 17.83 70.19 105.15 21.48 15.50 10.91 72.91 50.84 52.73 4.69 7.20 0.00 4.47 0.00 21.96 0.00 29.93 15.91 0.00 8.71 5.33 3.16 77 E25_Aa NovelBoundary 0 4438.34 5164.61 11056.17 13176.11 3770.80 3333.59 5045.10 13276.40 12503.46 11283.85 1654.73 712.73 877.54 655.31 1791.46 5375.51 3552.78 18655.64 5143.39 5077.39 2546.28 2308.32 4862.11 78 ER25a ExonRegion 0 2.92 5.35 4.41 2.62 5.27 4.51 2.28 4.70 1.44 2.34 1.06 0.60 2.29 1.09 0.64 1.47 1.19 1.04 1.17 1.01 0.01 2.19 2.12 79 E25a_E26a KnownJunction 0 0.00 44.66 25.46 23.67 7.56 50.03 24.02 16.02 28.01 7.87 22.74 5.40 0.00 9.48 0.00 0.00 4.49 4.97 27.86 18.60 0.00 3.00 0.00 80 ER25b ExonRegion 0 0.81 45.29 40.06 26.94 9.98 58.75 24.19 29.32 32.26 17.12 20.00 4.33 2.16 6.75 0.22 0.34 11.17 14.28 22.54 32.73 2.20 3.53 0.00 81 ER26a ExonRegion 0 6.81 40.79 36.14 26.32 6.82 61.63 12.85 19.11 29.13 13.20 15.88 0.93 0.55 4.52 4.38 6.12 5.89 9.06 18.24 24.57 0.22 2.00 0.00 82 E26a_E27a KnownJunction 0 3.78 35.13 33.47 21.28 17.15 70.75 4.42 14.46 21.09 14.05 9.21 5.70 0.00 2.47 0.00 15.64 4.77 14.14 25.04 27.74 0.00 4.78 0.00 83 ER27a ExonRegion 0 9.99 33.22 46.19 43.42 11.52 34.87 8.48 19.13 36.61 22.38 14.71 4.33 8.47 5.43 3.47 4.40 4.45 26.36 22.63 40.94 2.34 6.09 2.43 84 E27_Da KnownBoundary 0 7.04 40.98 44.53 38.09 18.51 36.23 4.37 9.90 47.22 19.85 10.00 5.40 0.00 5.24 10.38 3.67 3.93 8.21 9.22 27.74 0.00 5.14 4.10 85 E27a_E28a KnownJunction 0 0.00 0.00 3.13 0.00 0.00 4.43 2.25 0.00 1.19 1.53 0.00 0.00 0.00 2.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 86 ER27b ExonRegion 0 24.26 45.23 44.75 37.96 17.12 40.04 15.81 20.77 40.59 21.73 9.60 4.98 9.26 5.47 3.55 4.32 13.24 10.04 13.70 33.22 0.42 4.72 3.32 87 E27_Db NovelBoundary 0 14.97 22.04 31.61 31.30 0.00 15.39 4.20 13.51 21.82 10.58 4.58 0.00 0.00 2.18 5.69 0.00 0.00 4.52 20.14 11.38 2.35 0.00 7.17 88 I27 Intron 0 14.79 47.69 54.24 46.96 20.16 45.31 17.52 25.45 37.77 17.96 9.43 8.85 7.11 3.50 6.06 3.34 7.52 5.11 10.93 24.44 0.44 4.43 2.42 89 I27_SR1 SilentIntronRegion 0 4.33 17.79 10.29 8.30 13.51 23.69 6.29 2.25 11.85 5.06 5.63 5.52 1.55 1.28 2.47 2.11 4.76 1.02 3.99 7.32 0.00 1.39 2.06 90 I27_AR1 ActiveIntronRegion 0 15.56 50.69 58.17 50.43 20.89 47.63 18.57 27.51 40.20 19.20 9.72 8.78 7.54 3.60 6.43 3.50 7.85 5.51 11.66 25.86 0.43 4.70 2.47 91 I27_SR2 SilentIntronRegion 0 14.01 8.35 16.56 13.44 10.12 10.56 6.19 5.75 10.95 3.63 9.35 24.69 5.83 6.32 1.02 0.00 1.87 0.10 0.00 15.47 2.26 2.08 1.90 92 E28_Aa NovelBoundary 0 56.23 167.80 61.77 87.80 124.70 98.64 94.02 83.46 76.21 51.17 82.76 48.62 69.15 69.05 67.99 52.64 72.00 35.48 32.94 50.43 35.40 13.29 8.45 93 ER28a ExonRegion 0 0.52 1.49 0.54 0.00 0.00 1.87 0.06 0.31 0.26 0.07 0.00 0.00 0.00 0.12 0.00 0.00 0.00 0.00 0.39 0.00 0.00 0.00 0.00