Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DTNBP1 Gene 0 55.93 25.41 52.30 31.84 44.68 20.24 22.26 29.45 23.14 34.75 100.08 44.51 56.59 70.58 138.57 69.60 104.05 31.85 18.45 30.77 21.11 23.19 15.84 2 397306 Transcript 0 1.61 3.98 4.01 1.35 2.04 2.36 5.01 1.75 1.13 2.28 18.39 0.94 6.28 8.46 5.83 2.55 4.56 1.33 0.31 8.35 0.36 1.27 3.23 3 355917 Transcript 0 0.00 0.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.03 0.00 0.00 0.00 4 338950 Transcript 0 20.94 3.32 8.29 6.33 10.95 3.47 4.47 10.49 4.38 10.09 7.41 5.32 6.99 5.22 10.94 10.04 13.15 9.80 7.22 7.38 4.43 3.85 6.12 5 344537 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 462989 Transcript 0 9.39 14.54 28.38 11.31 2.14 1.65 2.38 13.37 3.58 5.36 1.16 6.31 2.70 0.02 4.98 3.43 2.31 35.09 9.82 28.37 0.66 0.00 0.29 7 397302 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.21 0.00 0.00 0.00 0.00 1.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER1a ExonRegion 1 42.63 13.99 7.16 1.30 16.10 14.98 18.82 4.41 5.51 12.44 49.44 5.76 15.27 25.66 55.02 47.76 48.75 7.34 8.52 8.44 15.72 6.49 8.71 9 E1_Ab KnownBoundary 0 26.52 12.56 8.46 3.86 3.99 5.39 3.89 16.31 8.77 20.33 46.17 5.85 19.80 14.54 13.35 11.28 46.47 7.79 4.24 7.99 20.02 5.33 0.00 10 ER1b ExonRegion 1 9.66 7.99 20.79 6.72 8.90 7.57 1.88 12.51 13.23 19.75 95.27 7.95 37.52 51.23 82.13 33.13 112.77 17.27 7.41 8.20 28.41 20.57 6.57 11 E1a_E2a KnownJunction 1 9.33 12.30 51.95 12.85 16.98 0.00 4.15 24.81 24.07 30.94 165.62 13.05 47.40 89.47 162.80 93.05 167.37 24.29 14.12 8.56 43.00 34.35 23.05 12 E1a_E4a NovelJunction 0 0.00 0.00 3.13 1.93 0.00 0.00 0.00 0.00 0.00 2.36 11.90 0.00 0.00 9.83 0.00 8.20 0.00 0.00 3.48 2.81 0.00 0.00 0.00 13 ER2a ExonRegion 0 27.36 18.79 63.31 24.28 47.17 27.41 26.72 30.66 32.89 45.43 219.63 54.76 77.12 120.88 221.35 170.13 207.65 30.04 25.01 26.75 40.52 44.37 39.05 14 E2a_E3a KnownJunction 0 0.00 0.00 3.43 0.00 0.00 2.44 4.24 0.00 0.00 1.42 14.00 0.00 6.33 9.48 0.00 0.00 0.00 0.00 0.00 9.08 0.00 0.00 4.35 15 E2a_E3b KnownJunction 0 50.90 28.09 55.88 40.85 40.24 27.14 22.83 30.56 37.35 47.95 276.07 128.14 137.33 98.59 267.26 208.58 232.73 35.07 36.61 18.92 32.99 49.29 14.00 16 E2a_E4a NovelJunction 0 6.82 0.00 8.34 7.72 0.00 0.00 0.00 2.01 4.66 5.21 8.05 18.76 6.82 12.07 24.72 3.85 13.18 4.35 4.61 0.00 0.00 3.12 4.35 17 ER3a ExonRegion 0 3.22 7.96 4.58 2.70 4.07 2.27 5.79 3.49 2.26 3.14 22.77 1.88 6.22 7.45 11.67 5.10 9.11 2.65 0.62 7.63 0.72 2.54 2.11 18 E3_Ab KnownBoundary 0 7.48 12.10 3.67 3.80 0.00 4.54 11.97 4.60 3.27 2.93 14.79 0.00 0.00 2.47 4.45 0.00 0.00 1.95 0.00 5.50 0.00 3.12 0.00 19 ER3b ExonRegion 0 58.37 24.57 63.13 44.27 85.94 37.08 42.95 45.22 42.44 61.73 271.38 67.19 165.00 103.20 229.95 198.42 218.32 43.90 25.55 38.72 36.32 34.04 13.80 20 E3a_E4a KnownJunction 0 93.28 17.96 73.98 44.42 83.11 47.64 43.32 43.78 40.45 57.89 236.27 74.72 160.05 142.27 194.94 139.62 122.58 36.31 23.25 52.86 32.93 19.72 19.63 21 ER4a ExonRegion 0 84.80 32.17 79.99 45.44 81.11 43.20 48.68 55.42 50.78 60.92 235.31 108.88 124.63 136.11 218.02 148.56 206.39 38.35 15.67 44.82 48.45 33.75 30.86 22 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23 ER5a ExonRegion 0 66.47 47.63 76.12 44.02 72.06 49.07 63.65 34.85 47.06 54.95 214.19 136.30 182.31 198.14 264.25 158.33 292.46 27.86 19.83 42.25 40.50 56.82 25.57 24 E5a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER6a ExonRegion 0 126.80 51.97 112.10 81.46 141.31 42.43 62.24 65.20 60.48 84.87 292.42 150.36 210.28 222.08 315.65 215.62 290.45 69.37 31.59 56.71 47.52 56.71 38.31 26 E6a_E7a KnownJunction 0 148.47 56.63 86.96 90.73 209.34 39.69 39.70 50.97 51.85 59.88 260.64 114.79 123.69 196.07 247.11 161.41 227.58 45.14 28.24 49.28 32.56 52.05 19.80 27 E6a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 E6a_E10a NovelJunction 0 14.60 2.43 11.56 1.70 4.33 0.00 4.50 4.60 0.00 1.24 0.00 0.00 13.80 0.00 8.90 4.36 0.00 4.06 3.86 0.00 0.00 0.00 0.00 29 E7a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30 ER7a ExonRegion 0 149.90 52.43 105.75 94.10 183.35 47.52 55.89 69.14 69.92 84.37 310.36 162.07 205.95 221.30 309.42 205.72 263.78 76.56 39.19 57.26 41.68 61.06 31.03 31 I7 Intron 0 8.93 2.95 2.50 5.12 7.30 1.33 9.95 2.73 3.72 3.94 1.28 8.83 17.26 0.96 5.41 6.54 7.35 0.96 1.65 3.80 0.66 0.19 1.18 32 I7_SR1 SilentIntronRegion 0 8.91 2.82 2.51 5.18 7.32 1.33 10.01 2.74 3.75 3.94 1.27 8.89 17.39 0.97 5.44 6.52 7.38 0.96 1.62 3.81 0.65 0.19 1.17 33 E8_Aa NovelBoundary 0 31.26 38.81 26.85 18.98 11.21 0.00 1.68 19.92 1.79 7.41 2.68 12.00 0.00 0.00 9.89 11.62 0.00 24.04 16.09 35.47 0.00 0.00 0.00 34 ER8a ExonRegion 0 15.00 12.31 21.57 11.46 4.28 3.30 4.75 13.03 4.40 6.12 2.32 6.32 5.41 0.04 9.97 2.67 4.62 23.62 14.94 23.19 1.32 0.00 0.59 35 E8_Da NovelBoundary 0 17.34 5.72 6.56 6.69 11.80 0.00 5.92 8.50 4.57 4.59 2.53 19.96 6.82 2.41 19.04 6.92 17.02 1.58 14.21 0.00 8.22 0.00 4.18 36 E8a_E10a KnownJunction 0 3.78 16.77 35.19 11.15 0.00 0.00 0.00 13.72 2.75 4.59 0.00 6.30 0.00 0.00 0.00 4.19 0.00 46.55 4.71 33.56 0.00 0.00 0.00 37 I8_AR4 ActiveIntronRegion 0 55.02 18.30 5.86 6.97 11.71 0.83 8.31 6.16 4.65 2.98 1.10 4.12 8.08 0.78 7.01 3.36 4.80 1.26 1.50 4.18 0.17 0.78 3.41 38 I8_SR4 SilentIntronRegion 0 35.13 9.34 5.48 10.09 16.06 1.58 8.69 5.80 3.11 5.13 1.45 9.60 11.85 1.04 9.73 3.34 4.95 1.29 1.79 2.79 1.24 1.17 0.83 39 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 ER9a ExonRegion 0 0.00 0.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.08 0.00 0.00 0.00 41 ER10a ExonRegion 0 143.92 65.75 139.28 102.67 151.63 58.07 66.64 79.51 69.17 87.16 318.93 187.61 214.18 220.88 348.15 211.02 273.97 128.73 57.34 90.07 42.61 61.12 44.05 42 ER10b ExonRegion 0 140.27 87.80 150.53 92.26 84.68 55.27 56.03 72.03 53.11 84.32 254.38 137.33 139.17 177.90 335.22 152.72 254.43 100.66 45.47 86.14 46.06 54.51 40.46 43 E10a_E12a KnownJunction 0 134.69 91.56 140.77 107.61 78.10 58.09 39.70 54.14 62.90 73.63 240.75 68.27 67.85 169.23 291.00 168.84 242.73 92.19 25.69 59.19 22.55 37.78 29.19 44 ER10c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.62 0.00 0.00 0.00 0.00 1.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 45 E11a_E12b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 46 ER11a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 47 E12_Ab NovelBoundary 0 3.63 2.83 0.00 0.00 3.82 0.00 4.50 9.45 1.77 1.34 2.16 0.00 0.00 5.30 0.00 27.43 4.02 0.00 13.08 0.00 2.53 2.76 0.00 48 ER12a ExonRegion 0 110.06 86.09 149.09 107.21 66.89 55.63 30.45 62.22 55.58 69.58 218.42 90.92 75.04 182.44 319.14 149.60 206.86 84.38 31.85 55.32 33.06 43.75 33.28 49 ER12b ExonRegion 0 136.81 67.89 147.43 91.22 126.42 41.10 41.58 67.41 60.17 82.81 225.74 112.04 91.51 169.10 385.66 153.12 205.31 107.80 49.18 71.66 43.68 50.92 31.49 50 E12_Da KnownBoundary 0 13.78 5.00 17.33 6.83 16.04 2.21 7.91 2.01 10.01 3.09 5.11 5.85 6.66 10.18 10.75 11.19 22.35 6.51 0.00 11.95 5.25 9.00 8.02 51 E12a_E13a KnownJunction 1 120.54 71.50 174.00 111.27 105.09 25.44 31.05 62.56 54.95 76.69 175.10 119.44 33.93 161.87 429.94 163.72 167.18 81.95 74.64 66.22 34.78 51.31 37.82 52 ER12c ExonRegion 0 20.94 3.32 8.29 6.33 10.95 3.47 4.47 10.49 4.38 10.09 7.41 5.32 6.99 5.22 10.94 10.04 13.15 9.80 7.22 7.38 4.43 3.85 6.12 53 E12_Db NovelBoundary 0 36.60 0.00 10.56 6.86 11.12 0.00 7.51 6.00 1.79 11.90 4.69 6.30 6.66 0.00 8.78 8.20 16.74 3.27 7.91 17.26 0.00 3.00 0.00 54 I12 Intron 0 31.52 3.06 9.89 7.33 12.88 3.03 6.17 8.53 2.77 10.80 9.31 1.07 8.84 6.74 10.01 11.63 9.44 7.47 6.71 4.16 2.32 4.70 5.74 55 I12_SR1 SilentIntronRegion 0 21.34 2.92 9.34 7.01 15.86 1.16 4.53 5.86 2.69 11.32 9.61 1.22 12.56 6.03 12.31 11.25 9.37 8.82 9.81 3.28 2.37 4.99 6.03 56 I12_AR1 ActiveIntronRegion 0 39.92 3.20 10.42 7.67 10.66 4.56 7.54 10.73 2.86 10.49 9.16 0.97 5.99 7.38 8.30 12.01 9.59 6.48 4.32 4.90 2.31 4.52 5.58 57 E13_Aa NovelBoundary 0 50.82 3.03 7.75 7.86 8.57 0.00 5.43 13.27 5.76 14.67 2.21 6.00 0.00 9.42 8.90 16.41 8.79 2.57 3.76 5.43 2.97 5.14 8.28 58 ER13a ExonRegion 0 93.53 40.88 100.44 56.70 71.70 32.71 28.06 51.53 37.31 58.75 147.31 46.77 66.58 107.88 285.29 93.10 155.47 38.73 28.13 56.79 36.31 43.63 24.14 59 ER13b ExonRegion 0 8.47 0.00 2.04 1.36 5.35 1.22 0.00 0.00 1.24 0.00 3.22 0.00 6.25 7.58 11.61 0.00 6.60 3.70 0.00 0.00 0.00 2.08 3.92