Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 RANBP9 Gene 0 151.53 175.46 107.48 110.02 212.87 236.77 131.77 110.41 131.40 172.05 223.32 252.57 251.65 161.37 155.83 142.79 168.71 97.20 68.57 108.36 93.18 214.04 130.49 2 283152 Transcript 0 47.79 45.06 40.51 41.12 49.38 83.31 56.58 44.92 48.59 65.49 39.74 10.47 39.32 10.12 11.87 31.64 56.06 32.81 19.75 34.06 13.91 63.90 36.04 3 11619 Transcript 0 173.96 262.92 130.58 137.39 309.39 375.39 199.59 151.42 194.98 247.58 344.19 432.14 506.56 233.01 180.55 195.56 244.90 136.12 104.75 168.60 129.52 306.53 196.05 4 469916 Transcript 0 27.05 23.85 4.25 11.45 29.33 27.97 17.52 10.02 9.56 14.95 8.34 9.84 12.53 5.11 7.09 3.40 5.25 6.16 2.59 8.78 1.32 9.25 4.36 5 IG2_AR8 ActiveIntergenicRegion 0 5.57 20.74 8.12 9.55 13.30 4.80 6.92 9.43 8.66 16.72 2.02 9.92 25.47 0.52 5.22 0.00 0.86 0.72 3.33 2.07 0.00 14.18 1.69 6 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.86 3.66 1.22 0.32 1.97 3.66 15.35 2.14 1.25 13.75 5.56 16.55 22.04 7.68 4.48 2.53 12.01 0.54 27.12 7 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 2.21 1.77 1.97 5.03 13.35 19.95 12.60 0.00 16.72 4.45 18.97 42.73 25.49 8.66 8.25 17.67 0.00 18.78 8 ER1b ExonRegion 0 2.93 10.15 8.90 4.62 8.87 15.07 8.84 9.32 10.04 23.22 48.66 13.06 19.43 46.22 19.88 30.41 46.22 26.61 10.14 18.34 42.79 20.83 26.98 9 E1a_E2a KnownJunction 1 3.11 46.50 72.91 40.99 97.11 87.17 58.21 71.84 72.80 133.83 194.79 33.91 89.77 207.78 91.97 137.14 150.07 181.86 72.94 113.96 162.72 141.33 166.88 10 I1_AR1 ActiveIntronRegion 0 1.87 7.89 0.25 0.88 8.34 59.38 2.83 3.24 8.88 3.89 3.46 0.00 0.00 0.87 2.85 0.92 2.31 5.27 2.72 4.97 4.13 2.90 0.05 11 ER2a ExonRegion 0 26.40 81.27 59.84 51.39 91.62 116.22 79.08 73.66 101.50 156.51 247.58 118.17 138.44 225.62 109.16 181.49 207.43 126.11 53.55 115.37 168.31 184.45 147.15 12 E2a_E3a KnownJunction 1 32.38 162.93 40.98 56.34 87.86 174.27 126.66 77.96 112.35 198.11 310.08 209.92 295.92 264.11 115.09 161.84 251.71 110.06 58.35 154.17 142.15 262.02 187.20 13 I2_AR1 ActiveIntronRegion 0 14.90 28.12 17.88 12.34 16.16 6.25 15.08 25.09 18.35 22.72 2.39 8.49 6.68 0.55 5.89 3.49 4.45 2.01 2.15 5.72 1.20 3.42 8.76 14 I2_SR2 SilentIntronRegion 0 44.74 43.66 39.83 22.00 30.24 8.87 27.98 32.47 28.59 29.04 4.53 2.87 8.96 2.16 13.89 15.86 8.06 10.77 7.70 10.15 0.99 1.26 7.51 15 I2_AR2 ActiveIntronRegion 0 37.93 39.51 42.88 19.74 40.10 1.16 26.62 41.47 20.49 29.09 2.75 2.89 9.55 1.27 13.08 13.57 12.65 5.44 4.83 10.11 3.02 1.90 8.02 16 I2_AR3 ActiveIntronRegion 0 39.70 36.86 30.85 16.49 34.73 5.29 19.53 33.93 19.81 22.75 1.15 9.04 12.63 1.29 8.21 12.24 10.09 0.89 9.08 7.95 1.37 1.34 7.38 17 I2_AR4 ActiveIntronRegion 0 85.27 57.81 14.35 8.66 41.09 9.17 23.93 26.05 8.29 14.91 1.93 0.93 13.07 0.00 6.84 5.94 0.00 0.00 9.56 7.14 0.94 0.00 2.94 18 ER3a ExonRegion 0 43.53 141.78 62.49 67.68 86.89 158.23 97.50 93.24 137.68 197.40 320.28 226.60 271.40 213.19 114.74 164.87 223.15 137.78 81.08 156.96 152.06 242.00 180.35 19 E3a_E4a KnownJunction 0 49.27 126.10 75.84 76.51 127.25 203.52 102.90 92.46 158.24 184.22 321.77 347.96 328.55 196.13 134.37 186.70 189.06 144.55 106.54 167.08 134.24 244.20 158.60 20 ER4a ExonRegion 0 36.06 147.04 74.90 86.26 135.13 217.28 97.45 90.37 144.10 202.42 304.11 310.18 320.09 216.72 109.64 199.84 254.17 89.58 68.86 162.17 110.22 251.41 160.75 21 E4a_E5a KnownJunction 0 97.20 172.27 118.80 136.28 174.53 290.17 132.13 126.96 182.78 223.68 313.71 531.62 403.06 261.52 145.62 240.96 316.22 100.61 112.66 183.63 137.33 338.13 240.89 22 E4a_E6a NovelJunction 0 0.00 3.03 7.45 1.60 3.65 14.31 1.81 2.09 4.98 7.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.11 8.56 5.94 0.00 10.35 3.59 23 ER5a ExonRegion 0 59.54 115.03 96.91 119.34 132.86 251.23 123.53 107.31 163.36 203.95 289.68 469.09 386.21 236.91 120.72 195.13 241.40 113.36 91.54 177.61 122.35 298.03 198.29 24 I5_AR1 ActiveIntronRegion 0 12.71 23.74 18.11 17.51 22.85 7.86 30.60 18.12 18.64 20.10 7.49 37.56 15.03 8.54 7.78 11.88 7.92 4.04 2.15 11.74 1.92 14.19 9.35 25 E6a_E9b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 ER6a ExonRegion 0 51.85 97.87 85.32 112.27 144.49 237.94 131.57 89.66 153.62 178.34 251.04 414.55 396.31 220.68 105.17 214.74 205.07 141.35 67.69 178.99 125.06 265.65 165.19 27 ER6b ExonRegion 0 100.04 242.13 96.20 103.75 222.03 285.00 165.54 100.38 179.10 208.51 316.36 338.92 386.30 276.34 126.29 234.43 253.29 182.90 109.58 159.91 170.27 295.48 193.42 28 E6b_E7a KnownJunction 0 165.29 362.24 86.69 117.03 236.59 365.81 211.32 84.57 180.35 247.91 384.73 260.18 379.68 303.49 152.91 261.90 264.05 166.89 157.09 153.02 164.14 367.16 277.94 29 ER7a ExonRegion 0 81.27 236.69 95.74 82.56 239.14 363.89 181.34 111.48 164.69 215.66 349.36 294.29 379.19 231.83 138.36 212.44 244.82 158.63 97.53 155.22 143.69 257.99 191.90 30 E7a_E8a KnownJunction 1 64.75 168.39 86.10 77.45 278.95 381.77 202.13 123.35 138.02 210.81 249.12 405.28 594.28 233.45 136.72 182.17 182.89 101.93 75.96 120.68 86.06 297.41 194.46 31 ER8a ExonRegion 0 107.98 172.33 104.03 119.25 271.26 347.11 170.05 164.82 179.87 278.33 405.75 429.53 537.98 282.95 185.76 248.60 279.70 157.77 136.27 171.29 129.59 420.24 259.88 32 E8a_E9a KnownJunction 0 149.73 224.37 132.73 131.72 269.78 356.56 193.92 195.55 206.31 297.95 389.78 476.71 471.40 281.01 176.90 162.09 278.73 127.55 82.36 226.08 155.49 280.76 188.91 33 ER9a ExonRegion 0 127.07 219.29 98.91 114.39 227.03 313.26 168.69 168.62 187.48 273.41 416.01 324.96 433.75 242.57 143.01 200.64 262.71 128.65 105.45 182.40 163.67 284.54 195.41 34 E9_Ab KnownBoundary 0 148.54 272.32 111.05 158.12 329.88 420.38 225.14 198.26 207.35 318.80 440.37 483.31 582.59 302.26 195.44 265.83 297.43 127.59 139.67 171.43 146.35 444.68 218.79 35 ER9b ExonRegion 0 182.54 291.15 115.52 148.50 341.23 479.33 226.48 174.75 187.50 276.67 394.99 540.57 640.28 263.78 181.25 217.11 280.51 146.70 101.39 191.45 152.33 370.91 214.32 36 E9a_E10a KnownJunction 0 149.80 261.86 132.08 158.25 383.36 419.93 218.47 162.28 201.50 251.54 306.76 580.24 490.71 229.80 187.40 173.12 257.50 108.48 82.36 183.89 101.19 264.77 144.26 37 ER10a ExonRegion 1 201.07 218.28 127.26 155.29 343.30 413.25 229.84 161.56 196.19 246.72 296.15 508.01 615.75 221.27 193.02 205.72 217.34 106.77 113.71 162.29 77.53 340.77 165.48 38 E10_Da KnownBoundary 1 109.87 125.24 59.90 61.00 133.02 180.92 96.14 61.82 60.99 107.31 86.29 152.15 280.99 50.50 29.54 54.77 91.07 34.45 30.40 60.15 16.00 159.51 79.64 39 E10a_E10b KnownJunction 1 143.36 135.17 121.52 123.36 147.28 246.28 168.52 134.44 143.81 192.82 103.87 29.26 116.71 16.60 30.04 78.36 146.14 90.74 54.78 99.65 29.71 191.17 81.01 40 E10_Ab KnownBoundary 0 110.98 70.05 68.60 64.56 193.38 194.43 151.21 53.07 68.78 88.89 116.56 219.52 199.18 34.32 21.63 73.66 90.23 59.03 51.48 68.14 17.05 115.73 56.00 41 ER10b ExonRegion 1 242.69 232.51 142.14 163.09 403.15 426.05 254.20 160.17 190.62 271.05 279.63 734.57 794.18 171.07 178.91 156.53 231.06 128.73 97.68 150.35 47.75 322.95 150.75 42 ER10c ExonRegion 1 261.39 248.63 164.86 177.31 403.66 396.50 261.72 162.58 211.16 254.87 307.06 678.17 644.79 208.05 204.42 184.63 224.13 125.57 108.68 160.13 65.45 289.32 174.55 43 E10_Db NovelBoundary 0 181.66 175.50 93.58 95.36 225.72 217.72 148.61 78.29 101.01 124.77 163.15 311.05 280.99 118.84 109.65 115.70 117.91 51.11 69.08 100.80 41.02 169.62 94.84 44 E10c_E11a KnownJunction 0 284.94 402.76 161.41 197.94 381.58 391.02 222.58 178.67 247.83 242.83 348.77 474.15 523.34 202.54 196.06 146.63 255.45 106.29 94.69 193.29 129.55 306.72 222.80 45 ER10d ExonRegion 0 225.76 334.52 151.03 173.77 359.89 356.22 213.38 164.78 228.50 247.06 351.63 512.32 530.36 214.11 200.19 169.41 247.02 112.56 106.98 181.03 114.41 288.05 211.44 46 ER11a ExonRegion 0 165.59 309.54 138.73 146.16 331.24 450.77 212.07 162.86 212.01 246.27 361.47 510.38 541.66 227.96 202.49 195.50 255.03 151.73 98.88 177.52 144.36 288.06 172.47 47 E11_Da NovelBoundary 0 23.56 20.39 30.96 35.46 22.33 15.45 7.73 17.54 28.85 31.19 19.64 18.46 23.38 12.24 13.60 14.10 21.69 3.27 7.91 26.97 3.15 23.82 3.24 48 E11a_E12b KnownJunction 0 220.71 229.89 185.56 138.94 413.67 534.41 195.82 172.02 236.37 245.22 398.15 552.63 772.84 214.38 225.85 240.19 282.09 180.07 127.63 204.53 181.69 274.14 174.57 49 I11 Intron 0 20.51 38.02 11.46 27.27 43.34 22.63 20.78 26.74 21.20 38.20 13.11 21.21 24.82 11.64 13.37 8.39 6.91 8.59 8.12 18.10 4.11 33.84 14.96 50 I11_AR1 ActiveIntronRegion 0 17.37 33.74 12.70 22.60 20.96 17.60 21.05 20.95 20.88 25.44 13.28 17.03 25.49 9.52 7.14 13.39 6.83 10.99 8.14 14.80 7.10 22.37 20.20 51 I11_AR3 ActiveIntronRegion 0 22.54 36.85 10.16 46.12 61.76 31.36 22.68 39.81 29.86 53.34 17.09 32.60 32.47 14.60 23.26 7.96 10.68 9.92 7.66 17.74 1.82 48.78 19.51 52 I11_SR1 SilentIntronRegion 0 17.63 34.63 6.75 15.95 29.62 18.14 16.95 24.62 13.31 32.47 6.73 10.23 7.28 13.18 20.54 3.91 6.42 5.30 9.33 13.70 1.58 34.04 6.08 53 I11_SR2 SilentIntronRegion 0 28.06 55.70 22.26 38.85 85.35 28.53 25.53 29.83 31.17 84.36 20.03 39.02 31.55 20.86 13.11 10.73 3.90 7.44 15.89 35.01 11.25 61.40 14.49 54 I11_AR4 ActiveIntronRegion 0 32.96 58.57 14.28 26.54 74.15 27.27 24.32 26.65 21.08 48.66 13.34 27.11 29.65 13.68 13.25 4.67 6.73 7.77 7.64 30.22 0.81 37.47 12.11 55 E12_Aa NovelBoundary 0 113.13 130.90 41.90 53.77 106.71 47.30 41.65 48.43 30.79 87.09 7.79 42.61 60.87 29.25 33.25 11.11 0.00 7.25 4.80 11.76 0.00 26.82 8.02 56 ER12a ExonRegion 0 27.05 23.85 4.25 11.45 29.33 27.97 17.52 10.02 9.56 14.95 8.34 9.84 12.53 5.11 7.09 3.40 5.25 6.16 2.59 8.78 1.32 9.25 4.36 57 E12_Ab KnownBoundary 0 43.49 32.63 20.96 39.69 37.01 58.38 37.89 22.63 26.91 44.70 11.95 29.56 33.60 26.13 11.50 16.41 8.60 22.84 14.40 43.27 17.24 32.88 15.88 58 ER12b ExonRegion 0 163.27 208.14 145.11 139.91 225.31 363.71 183.44 158.57 198.89 254.85 372.05 507.78 444.16 293.73 258.92 279.99 316.32 227.52 157.66 171.09 196.55 309.66 259.49 59 E12a_E13a KnownJunction 0 263.97 226.60 122.47 142.61 438.03 525.72 296.73 175.26 214.38 303.14 578.46 324.41 259.89 279.30 277.40 296.42 426.27 248.35 138.36 202.81 248.34 272.67 244.31 60 Ix_AR8 ActiveIntronRegion 0 35.63 16.07 7.45 7.25 28.66 11.22 13.50 5.90 6.57 9.15 1.97 8.38 9.78 2.73 8.27 7.58 8.42 9.14 4.87 14.11 2.81 7.44 4.49 61 Ix_SR6 SilentIntronRegion 0 20.25 32.48 10.72 8.63 58.01 10.47 12.41 17.26 11.37 9.38 1.96 9.56 11.27 3.43 11.12 0.33 4.86 8.96 0.00 15.69 0.00 2.84 4.49 62 Ix_AR2 ActiveIntronRegion 0 22.35 65.47 12.07 19.74 28.35 14.06 14.09 19.31 17.18 17.88 8.45 13.05 12.31 5.52 7.62 6.02 6.46 9.14 7.84 17.44 4.17 14.37 7.45 63 Ix_AR1 ActiveIntronRegion 0 28.88 44.66 8.80 16.00 18.36 10.03 11.28 14.68 22.98 19.07 5.53 9.10 14.25 9.90 14.70 5.83 7.50 20.27 7.38 13.68 4.12 16.80 7.25 64 ER13a ExonRegion 0 316.46 331.29 160.96 152.63 383.06 488.43 227.91 191.33 235.68 288.85 408.19 354.63 309.21 286.61 271.19 306.79 337.02 297.39 137.51 173.75 230.13 295.21 306.12 65 E13a_E14a KnownJunction 0 513.79 473.93 168.56 201.14 418.00 588.92 277.21 238.72 271.90 340.56 384.62 440.09 393.32 405.09 345.63 384.26 383.08 241.55 226.17 220.19 224.07 433.53 368.85 66 E14_Aa NovelBoundary 0 73.57 16.64 6.59 9.79 20.12 54.06 33.39 18.94 9.06 17.78 5.05 0.00 0.00 0.00 0.00 0.00 4.77 0.00 0.00 3.26 3.15 5.76 4.35 67 ER14a ExonRegion 0 346.43 263.03 153.40 138.49 280.12 368.47 163.85 158.38 201.23 244.18 302.09 255.17 222.45 243.99 255.07 231.19 282.91 180.70 96.84 144.20 180.72 283.32 229.26 68 E14_Da KnownBoundary 0 519.35 340.01 188.37 160.02 392.11 423.28 241.44 168.61 203.21 220.19 319.71 124.54 177.59 180.71 234.63 180.12 271.72 140.53 75.58 126.04 137.02 265.32 126.85 69 ER14b ExonRegion 1 325.66 283.28 218.23 220.06 387.77 308.19 203.68 181.18 183.63 233.46 223.73 303.93 240.26 147.43 283.69 131.72 146.79 65.89 71.69 116.46 53.16 301.43 114.75