Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC139795.1 Gene 0 33.94 37.78 17.68 43.12 20.75 2.99 19.30 27.94 29.89 26.36 11.55 11.42 9.02 12.37 8.19 8.93 4.24 75.43 3.81 33.25 21.78 12.21 18.84 2 499900 Transcript 0 18.85 17.59 9.00 19.69 11.47 1.94 8.31 14.15 15.88 13.03 6.57 5.04 4.00 5.97 3.76 3.93 1.96 34.47 1.77 15.41 9.81 5.91 10.95 3 IG9 Intergenic 0 9.03 12.97 10.75 16.35 12.38 3.19 10.98 16.10 15.16 21.27 10.22 5.59 5.80 11.48 8.97 11.25 11.12 58.04 11.49 26.34 21.31 13.65 20.48 4 IG9_SR1 SilentIntergenicRegion 0 8.13 11.60 8.67 13.33 10.47 3.34 8.35 13.06 15.16 18.99 8.38 3.86 5.09 10.55 6.21 9.20 12.23 53.65 8.35 21.32 17.92 12.40 16.27 5 IG9_AR1 ActiveIntergenicRegion 0 10.62 15.39 14.43 21.70 15.77 2.94 15.61 21.47 15.22 25.32 13.49 8.64 7.07 13.15 13.84 14.89 9.20 65.93 17.03 35.23 27.31 15.88 27.92 6 ER1a ExonRegion 0 11.10 11.22 17.92 21.71 11.66 4.74 11.54 27.71 19.81 19.08 10.27 12.13 11.06 14.76 16.35 9.10 8.99 53.29 8.46 32.16 28.50 14.90 22.80 7 E1_Da NovelBoundary 0 16.97 18.35 17.65 26.00 29.03 2.50 11.75 13.76 30.47 20.39 4.90 5.85 18.83 4.89 0.00 14.78 4.77 72.29 0.00 42.44 34.16 5.69 26.55 8 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 I1 Intron 0 20.76 22.09 14.69 23.39 24.76 5.17 19.65 23.84 20.36 20.55 10.50 6.33 5.84 11.98 15.54 8.37 8.63 51.37 6.09 21.83 26.93 10.06 23.93 10 I1_SR1 SilentIntronRegion 0 5.85 1.07 3.68 8.44 0.00 1.83 0.82 5.43 9.18 5.95 5.43 0.00 0.00 6.19 1.52 0.00 3.77 16.98 0.00 13.27 9.76 7.14 3.78 11 I1_SR2 SilentIntronRegion 0 7.59 19.74 15.68 18.76 18.22 6.62 15.11 21.98 18.58 22.74 13.55 5.57 9.45 10.65 16.19 3.04 3.48 60.99 3.11 23.84 28.58 6.80 24.59 12 I1_AR1 ActiveIntronRegion 0 15.14 20.19 15.70 25.09 17.88 2.58 16.09 19.81 23.89 23.91 12.65 5.97 7.10 12.31 16.48 10.04 9.14 62.82 3.22 21.83 31.86 6.95 24.83 13 I1_AR2 ActiveIntronRegion 0 34.81 27.62 17.35 30.50 37.02 8.30 29.50 35.88 23.15 22.50 9.51 7.58 5.36 14.87 17.83 9.62 12.59 52.78 10.53 26.91 29.28 14.21 29.42 14 I1_SR4 SilentIntronRegion 0 13.41 19.18 4.33 3.41 22.93 3.14 9.80 5.31 4.36 3.89 4.43 6.19 0.53 4.48 8.00 6.86 1.11 5.16 6.58 5.55 5.15 12.09 7.41 15 E2_Aa NovelBoundary 0 173.51 195.36 36.84 144.44 140.58 6.76 72.56 150.04 107.49 125.18 22.37 56.12 66.55 41.73 4.45 29.14 0.00 222.73 0.00 109.23 35.21 10.47 44.05 16 ER2a ExonRegion 0 2.47 1.80 1.65 1.63 0.57 0.20 0.00 2.04 2.79 2.01 1.03 0.05 0.00 0.14 0.00 0.04 0.00 2.71 0.00 1.12 0.70 0.03 1.26 17 E2_Da NovelBoundary 0 119.87 126.95 49.82 168.61 72.16 2.56 55.29 176.54 139.35 149.08 28.95 50.42 53.73 39.61 5.07 79.55 0.00 427.55 0.00 120.42 24.53 38.76 79.81 18 E2a_E3a KnownJunction 0 20.15 6.38 4.85 4.76 12.31 2.78 0.00 7.80 12.59 6.42 6.79 0.00 0.00 2.35 0.00 0.00 0.00 6.96 0.00 3.26 0.00 2.45 11.95 19 E3_Aa NovelBoundary 0 113.35 214.63 56.71 170.37 153.06 2.90 114.29 143.84 130.15 123.46 37.01 25.81 6.82 31.96 0.00 15.04 0.00 230.65 0.00 114.35 26.38 36.92 43.19 20 ER3a ExonRegion 0 60.52 68.55 20.59 70.35 32.82 1.97 30.01 33.19 44.20 37.62 14.76 13.00 8.94 12.61 2.47 10.50 0.80 109.40 0.39 40.49 19.87 12.18 18.73