Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TBC1D9B Gene 0 45.69 40.82 53.03 55.04 34.94 99.46 32.26 85.28 105.44 94.37 226.71 71.86 64.52 217.53 169.87 182.43 143.45 283.10 102.04 101.55 246.26 150.85 147.44 2 355235 Transcript 0 39.60 11.89 34.82 23.06 23.98 38.92 16.67 27.11 18.41 28.33 107.61 63.37 35.10 120.13 122.72 129.19 96.67 60.00 75.70 26.28 123.81 85.63 102.45 3 444477 Transcript 0 10.80 6.00 3.90 7.73 4.61 8.21 4.26 8.92 7.65 10.43 15.77 6.24 8.00 30.37 15.24 19.56 13.02 36.42 11.46 13.59 23.65 19.49 17.84 4 356834 Transcript 0 15.89 51.04 16.13 42.54 36.84 125.44 23.05 88.68 143.40 76.76 17.27 2.85 2.92 21.84 24.97 7.60 14.07 207.54 46.07 131.00 24.96 21.95 19.89 5 IG45 Intergenic 0 4.14 45.69 11.39 28.88 20.55 51.81 18.12 21.05 52.00 31.23 0.25 0.03 0.07 0.01 0.06 0.00 0.00 82.61 15.97 52.65 0.48 1.02 1.00 6 IG45_SR6 SilentIntergenicRegion 0 2.04 14.39 3.13 8.70 6.73 17.04 10.06 8.02 23.89 12.75 0.09 0.00 0.06 0.02 0.00 0.00 0.00 49.39 10.07 33.30 0.34 0.61 0.56 7 IG45_AR5 ActiveIntergenicRegion 0 2.50 27.55 7.39 17.47 17.32 41.24 22.95 18.27 78.40 41.73 0.56 0.00 0.00 0.00 0.00 0.00 0.00 170.44 36.32 88.55 0.47 0.89 1.43 8 IG45_SR5 SilentIntergenicRegion 0 0.58 30.26 3.24 16.39 12.30 40.79 15.62 10.53 53.67 29.94 0.70 0.00 0.00 0.00 0.00 0.00 0.00 85.65 21.53 70.28 0.00 0.57 0.81 9 IG45_AR4 ActiveIntergenicRegion 0 1.27 71.56 10.27 35.77 32.50 89.30 33.93 28.40 82.19 38.03 0.58 0.00 0.00 0.00 0.00 0.00 0.00 103.33 22.71 83.77 0.63 1.32 1.35 10 IG45_SR4 SilentIntergenicRegion 0 2.49 42.64 5.73 12.41 18.89 39.62 13.90 17.35 53.58 27.08 0.76 0.00 0.00 0.00 0.00 0.00 0.00 81.77 13.77 47.50 0.14 1.38 1.63 11 IG45_AR3 ActiveIntergenicRegion 0 1.31 19.07 7.71 14.86 7.99 31.36 12.28 11.15 47.98 25.89 0.40 0.00 0.00 0.00 0.00 0.00 0.00 106.74 20.02 60.94 1.14 1.93 1.51 12 IG45_SR3 SilentIntergenicRegion 0 0.00 6.44 2.55 4.09 3.79 7.34 4.63 1.01 7.41 5.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.24 3.98 27.84 0.00 0.00 0.00 13 IG45_AR2 ActiveIntergenicRegion 0 3.72 41.43 9.18 26.34 23.68 62.42 24.39 21.83 65.12 44.41 0.15 0.00 0.44 0.00 0.18 0.00 0.00 106.97 19.19 68.19 0.92 1.67 0.90 14 IG45_AR1 ActiveIntergenicRegion 0 9.68 103.58 27.95 67.75 43.51 105.63 29.33 44.80 89.30 56.59 0.41 0.00 0.00 0.00 0.00 0.00 0.00 120.40 22.38 75.04 0.44 1.37 1.69 15 ER1a ExonRegion 0 6.35 3.18 1.68 0.00 1.34 6.30 5.96 0.00 0.39 0.00 9.06 0.00 0.00 15.12 24.30 3.72 8.66 1.27 9.95 2.93 13.08 5.73 4.77 16 ER1b ExonRegion 0 14.82 8.13 3.68 0.00 5.35 25.67 11.92 0.00 2.47 0.00 21.26 0.00 0.00 42.23 49.32 5.94 23.11 3.70 19.11 10.64 30.85 10.42 8.81 17 ER1c ExonRegion 1 14.76 6.48 9.41 5.86 11.46 42.09 11.68 14.25 22.78 17.05 72.14 7.04 11.20 49.59 53.39 39.67 44.17 50.98 29.44 25.73 82.15 29.29 26.60 18 E1a_E2a KnownJunction 1 0.00 9.54 26.20 21.18 0.00 9.94 1.94 30.27 35.47 42.55 150.56 30.76 19.32 102.18 66.63 33.67 102.48 134.76 56.94 85.65 163.40 74.28 22.88 19 ER2a ExonRegion 0 7.36 26.38 59.80 46.71 8.82 28.32 12.70 61.24 66.74 74.48 228.27 57.84 38.20 230.60 234.01 163.49 149.49 292.74 121.27 136.53 209.97 155.16 130.83 20 E2a_E3a KnownJunction 0 20.37 58.41 102.13 68.62 40.41 53.15 26.94 114.02 103.62 104.71 259.75 111.79 37.98 231.92 187.53 231.73 226.27 315.42 110.59 161.58 281.64 182.54 183.45 21 ER3a ExonRegion 0 30.04 51.83 84.60 73.05 50.07 164.52 47.87 113.71 135.99 132.91 436.66 149.38 82.61 323.55 226.20 233.77 266.26 395.09 144.65 187.00 397.63 245.70 180.32 22 E3a_E4a KnownJunction 0 47.27 50.32 76.61 93.10 46.86 118.11 58.21 156.74 161.14 152.44 509.44 198.66 97.56 405.97 363.81 337.35 324.26 507.22 186.55 220.77 392.16 330.29 179.52 23 ER4a ExonRegion 0 39.13 38.97 77.89 79.66 40.64 84.76 31.42 113.98 168.35 167.34 457.15 180.72 123.93 411.87 290.51 297.71 274.57 428.66 173.21 197.02 409.39 286.79 203.71 24 E4a_E5a KnownJunction 0 34.97 60.25 77.20 111.84 37.01 121.24 23.72 110.61 209.52 197.27 418.84 125.59 227.10 473.60 315.10 369.90 274.99 607.79 129.89 255.16 409.03 287.98 245.08 25 ER5a ExonRegion 0 38.82 52.17 78.04 75.83 46.36 132.56 48.55 114.16 172.12 172.09 450.72 137.04 173.93 426.77 306.11 376.27 279.61 602.49 169.13 173.98 453.69 242.11 250.10 26 E5a_E6a KnownJunction 0 84.61 53.67 66.67 88.70 66.55 163.71 49.59 114.27 175.46 155.64 494.07 172.41 230.50 460.12 363.19 426.04 300.33 526.13 202.36 191.43 471.86 207.28 212.38 27 ER6a ExonRegion 0 42.98 55.69 66.29 68.37 39.60 127.08 40.03 100.27 152.45 150.25 394.90 155.76 161.38 399.35 340.33 288.35 249.55 436.97 155.15 159.58 411.17 215.07 225.01 28 E6a_E7a KnownJunction 0 62.68 76.63 96.27 94.33 49.83 178.93 67.44 128.27 194.82 183.82 438.74 163.40 212.00 387.19 324.12 403.40 300.51 700.23 205.94 224.80 462.96 238.50 295.95 29 ER7a ExonRegion 0 57.59 72.32 104.21 108.39 77.02 177.34 66.99 160.56 194.90 177.64 535.79 190.97 172.62 440.27 369.25 395.24 320.86 664.27 191.59 184.78 499.61 267.36 292.66 30 E7_Da NovelBoundary 0 20.67 6.58 11.32 10.32 4.16 15.50 6.18 10.35 8.59 7.01 49.49 19.51 8.28 40.61 56.00 67.42 34.69 44.89 37.84 27.93 2.66 32.45 23.65 31 E7a_E8a KnownJunction 0 56.23 82.29 102.10 91.06 49.41 144.24 52.95 168.24 192.94 168.85 378.83 142.25 114.77 357.17 232.52 345.46 219.45 680.66 222.03 127.26 385.49 264.04 319.09 32 I7_AR1 ActiveIntronRegion 0 8.91 4.69 5.45 4.68 2.90 7.21 8.07 8.73 5.99 8.81 36.19 15.95 13.62 29.44 46.24 22.99 21.93 23.17 8.64 10.68 14.04 13.85 12.75 33 ER8a ExonRegion 0 41.66 75.02 52.62 54.99 33.58 149.71 42.73 101.24 122.76 112.96 283.01 96.64 83.52 284.22 207.24 206.86 187.44 342.60 112.59 104.89 321.20 175.86 178.14 34 E8a_E9a KnownJunction 0 28.82 74.86 40.98 51.54 53.48 230.27 81.17 136.32 128.50 125.50 248.75 54.77 74.51 234.27 207.80 211.23 168.02 332.87 130.26 106.29 323.84 160.55 189.42 35 E9_Aa NovelBoundary 0 6.67 0.00 7.48 13.75 0.00 20.73 6.49 12.94 11.98 16.33 36.96 0.00 19.80 33.85 31.40 24.69 42.73 81.66 21.18 8.69 12.42 11.02 31.41 36 ER9a ExonRegion 0 26.93 49.26 43.21 55.17 41.94 102.10 42.91 94.46 135.56 108.62 298.26 75.69 74.08 285.14 212.08 244.34 209.36 312.25 160.60 127.55 337.12 186.01 186.06 37 E9a_E10a KnownJunction 0 26.67 45.52 49.58 49.21 27.84 67.18 16.21 105.48 162.76 123.65 302.39 90.03 90.42 299.55 203.85 241.90 158.30 423.78 170.55 104.63 388.27 256.45 237.74 38 E10_Aa NovelBoundary 0 20.45 5.85 7.27 4.83 8.15 7.78 12.90 29.33 24.31 17.33 22.11 23.86 6.49 69.22 41.29 65.88 24.31 67.78 33.70 32.92 54.06 31.29 56.17 39 ER10a ExonRegion 0 40.96 41.41 66.33 68.75 28.47 112.60 42.85 114.29 163.14 130.76 368.76 75.19 87.80 296.75 196.61 267.16 193.40 352.63 129.07 138.15 391.82 212.91 191.44 40 E10a_E11a KnownJunction 1 71.20 48.28 80.51 63.03 37.78 103.52 28.62 89.01 142.56 124.88 375.99 41.26 119.80 233.45 184.31 284.63 179.52 395.22 151.91 154.94 406.06 174.09 217.59 41 E10a_E12a NovelJunction 0 3.41 0.00 0.00 0.00 0.00 4.83 6.58 8.63 5.79 0.00 2.68 0.00 0.00 2.71 0.00 0.00 4.02 2.36 0.00 0.00 13.59 0.00 3.41 42 ER11a ExonRegion 0 48.21 44.79 66.94 57.08 22.34 98.76 30.31 95.06 130.69 115.36 308.54 55.00 89.83 278.08 197.24 228.78 171.09 367.06 124.07 164.17 340.53 197.95 185.01 43 E11a_E12a KnownJunction 1 63.49 37.95 84.74 73.95 45.93 215.61 42.31 101.90 152.28 111.34 345.14 30.61 40.42 295.43 154.52 228.49 185.60 440.77 116.90 120.36 386.66 160.74 201.37 44 ER12a ExonRegion 0 49.33 45.70 71.50 68.20 41.73 137.37 48.66 116.13 155.49 132.47 318.67 71.36 58.87 326.57 202.37 261.06 209.23 474.19 131.76 148.09 400.94 193.15 249.30 45 E12a_E13a KnownJunction 1 80.76 104.52 82.32 103.98 45.59 234.30 36.61 124.17 184.34 137.96 334.82 89.43 33.93 339.46 223.62 287.45 185.69 441.11 142.40 185.04 389.38 199.07 267.10 46 ER13a ExonRegion 0 83.63 70.00 81.06 89.46 51.58 191.41 43.64 137.31 196.00 151.75 335.08 97.28 46.61 340.67 242.01 278.92 231.34 487.75 177.67 172.85 413.26 234.84 273.42 47 E13a_E14a KnownJunction 0 89.42 88.34 91.75 84.34 130.39 192.90 46.02 141.13 201.39 147.26 353.04 104.88 79.54 323.15 224.37 367.68 295.09 439.65 201.51 192.26 385.12 221.36 252.16 48 ER14a ExonRegion 0 66.40 68.20 96.30 99.16 69.16 156.47 61.22 165.48 194.51 165.62 350.67 94.29 56.00 358.52 247.08 300.94 247.07 398.24 189.16 172.10 428.74 253.58 253.83 49 E14_Da NovelBoundary 0 10.59 12.23 1.83 18.15 4.33 16.01 8.08 21.03 23.21 1.26 22.90 12.45 12.99 46.50 18.79 29.22 32.26 84.48 47.53 9.33 32.49 14.33 14.26 50 E14a_E15a KnownJunction 0 57.86 78.01 58.60 75.28 58.83 177.40 59.44 149.55 182.64 163.80 290.34 135.34 70.13 281.18 229.43 308.47 212.34 389.08 253.00 141.32 289.92 277.02 261.89 51 I14 Intron 0 19.71 8.40 5.29 12.40 9.41 19.68 9.22 18.11 26.33 16.34 46.37 11.75 14.57 52.29 41.13 49.49 30.94 90.52 28.68 24.40 39.27 26.72 35.86 52 I14_AR1 ActiveIntronRegion 1 19.76 8.42 5.30 12.43 9.43 19.72 9.25 18.15 26.39 16.38 46.48 11.78 14.60 52.41 41.23 49.61 31.02 90.73 28.75 24.46 39.37 26.79 35.94 53 E15_Aa NovelBoundary 0 43.12 22.82 16.47 22.21 22.84 25.84 25.70 29.53 36.81 17.84 60.65 31.36 26.30 77.87 28.56 86.73 40.58 91.16 21.37 10.61 41.70 46.23 58.22 54 ER15a ExonRegion 0 58.16 70.88 59.74 48.49 64.92 174.21 65.30 120.67 144.99 136.18 320.08 99.89 65.32 279.87 211.24 240.01 227.57 338.49 163.79 102.96 347.29 255.58 204.33 55 E15_Da NovelBoundary 1 16.30 3.35 11.21 0.00 3.23 2.78 7.07 16.22 13.54 5.91 1.95 6.15 36.36 14.66 19.90 16.75 8.42 61.35 31.62 32.92 12.05 3.06 17.41 56 E15a_E16a KnownJunction 0 102.68 81.76 62.00 51.87 74.87 143.10 57.50 113.20 117.76 136.49 257.49 98.88 40.74 275.53 215.71 178.24 202.24 221.61 139.30 47.75 348.36 251.12 131.29 57 I15_AR1 ActiveIntronRegion 0 4.53 6.08 5.86 2.39 4.86 10.78 7.08 9.91 9.84 10.78 8.27 9.97 9.79 20.83 18.89 21.29 9.88 57.95 12.94 13.19 11.79 10.02 9.42 58 ER16a ExonRegion 0 81.84 81.30 81.52 72.47 65.83 168.03 58.23 148.62 150.75 146.74 301.12 69.40 68.27 304.22 251.90 261.99 186.70 385.93 143.33 127.00 357.81 238.19 237.92 59 E16a_E17a KnownJunction 0 170.03 126.42 140.36 120.80 88.62 282.00 103.12 192.10 205.67 170.14 329.87 136.54 93.50 332.22 258.11 222.68 196.54 535.37 135.35 144.07 327.36 199.74 195.65 60 ER17a ExonRegion 0 137.54 122.48 96.86 113.86 94.10 252.06 80.96 152.99 156.41 150.96 347.48 92.69 93.23 348.37 273.29 370.53 210.66 493.32 183.98 168.02 371.39 313.82 308.61 61 E17a_E18a KnownJunction 0 78.68 95.25 67.59 96.72 62.05 258.89 70.93 124.50 112.85 142.96 288.28 79.68 100.81 296.25 238.83 260.96 160.07 258.83 124.24 135.50 336.01 202.68 137.95 62 I17_SR1 SilentIntronRegion 0 23.92 7.73 6.49 3.45 2.23 10.21 6.44 7.78 6.13 9.60 9.34 10.82 12.66 12.34 20.70 16.74 8.36 13.06 2.76 12.84 11.46 9.93 6.56 63 I17_AR2 ActiveIntronRegion 0 16.49 13.60 11.17 7.49 6.17 13.93 4.53 8.88 13.59 21.36 19.10 9.00 17.21 15.38 21.32 25.28 13.70 33.76 14.18 18.58 14.84 10.35 8.74 64 E18_Aa NovelBoundary 0 12.89 15.85 13.01 8.66 15.87 26.86 10.91 15.73 25.09 36.26 13.74 12.60 14.77 28.31 4.45 27.69 16.27 40.09 9.51 29.21 21.81 13.47 15.28 65 ER18a ExonRegion 0 101.68 91.91 100.41 99.30 78.12 215.27 58.84 150.23 153.41 166.99 325.99 129.70 122.59 358.57 294.64 353.93 228.86 371.01 176.48 156.74 417.76 230.55 255.57 66 E18_Da KnownBoundary 0 12.67 17.89 4.32 18.08 12.22 8.63 6.01 21.40 9.32 10.23 23.53 18.31 13.64 33.96 33.50 48.36 13.46 66.37 17.60 23.65 39.11 25.72 16.99 67 E18a_E18b KnownJunction 0 7.11 37.03 10.76 40.49 45.76 140.83 20.93 96.81 149.30 83.70 23.01 0.00 5.84 19.54 24.11 0.00 11.78 213.40 45.08 154.49 28.48 13.23 24.58 68 E18a_E19a KnownJunction 0 111.20 30.39 102.51 67.22 69.02 107.21 42.57 78.08 52.66 83.73 312.24 190.11 105.03 344.75 341.31 382.98 280.60 177.88 216.67 74.97 356.89 249.47 301.50 69 ER18b ExonRegion 0 16.55 7.98 4.73 11.57 6.21 10.39 6.94 10.88 10.96 14.12 22.82 4.45 9.48 35.55 19.45 26.14 11.87 46.25 12.35 12.75 28.27 28.35 23.72 70 E18_Ab KnownBoundary 0 20.23 5.72 2.99 24.34 7.72 8.18 24.55 17.46 10.47 16.12 28.32 0.00 0.00 41.09 23.49 49.13 8.60 48.91 14.21 24.35 22.92 30.56 15.28 71 ER18c ExonRegion 0 31.66 64.38 24.43 56.18 32.27 138.34 31.64 114.60 162.29 84.66 45.15 11.08 13.60 71.07 50.71 45.12 36.71 299.93 78.55 147.06 52.36 50.59 32.30 72 E18_Db KnownBoundary 0 23.12 12.76 11.38 10.92 12.14 20.05 4.42 27.89 19.36 17.86 21.27 12.00 19.48 48.68 22.99 32.81 25.53 58.49 33.13 34.07 35.89 30.43 25.18 73 E18b_E19a KnownJunction 0 24.67 65.05 21.50 44.58 27.93 110.05 25.17 80.55 137.50 69.81 11.53 5.70 0.00 24.13 25.84 15.21 16.36 201.67 47.06 107.51 21.44 30.68 15.19 74 ER18d ExonRegion 0 5.06 4.02 3.08 3.89 3.00 6.04 1.58 6.96 4.34 6.74 8.72 8.03 6.52 25.19 11.04 12.98 14.17 26.59 10.57 14.43 19.03 10.62 11.96 75 E18_Dc NovelBoundary 0 20.89 15.39 9.58 8.89 7.64 37.71 12.41 29.16 19.97 27.10 49.96 0.00 26.95 58.39 23.86 29.74 44.41 54.51 27.29 16.49 31.14 20.82 28.26 76 I18 Intron 0 41.76 15.97 14.08 26.74 21.38 28.41 15.04 27.74 29.09 28.38 36.60 14.93 20.69 51.37 33.36 39.34 24.66 64.87 26.12 26.09 36.74 34.24 33.06 77 I18_AR1 ActiveIntronRegion 0 41.10 18.31 17.18 29.94 24.75 28.10 16.34 32.73 33.57 34.13 47.29 16.03 22.89 59.40 32.93 46.25 31.22 64.50 31.14 31.63 42.04 39.71 41.30 78 I18_SR1 SilentIntronRegion 0 69.75 32.18 21.02 43.14 34.44 29.66 18.79 37.20 46.53 40.24 52.78 33.04 50.88 72.34 61.43 66.49 33.73 85.52 49.30 35.43 49.34 53.54 73.67 79 I18_AR2 ActiveIntronRegion 0 40.82 13.99 12.17 24.34 19.04 28.57 14.21 24.75 25.99 24.89 30.35 13.51 18.12 46.29 32.27 34.52 20.87 64.18 22.43 22.82 33.45 30.54 26.87 80 E19_Aa NovelBoundary 0 53.12 25.46 17.59 16.78 28.78 54.91 3.89 30.68 30.96 15.90 45.85 18.01 20.45 74.52 22.99 45.46 27.86 66.70 39.62 32.15 22.55 25.23 52.24 81 ER19a ExonRegion 0 122.09 105.51 132.53 115.87 86.10 286.11 59.19 180.84 242.16 204.22 439.41 184.04 101.34 436.00 319.71 370.18 316.04 429.87 251.08 181.68 466.54 302.64 298.96 82 E19a_E20a KnownJunction 0 164.99 140.63 147.81 137.94 89.47 401.30 94.91 193.42 276.59 208.56 531.98 231.23 120.28 445.17 442.43 324.87 306.78 467.59 182.69 225.31 497.80 346.28 309.61 83 I19 Intron 0 10.64 6.74 8.40 12.16 6.29 9.41 4.81 12.94 8.66 8.04 8.89 2.75 6.46 6.17 4.76 8.90 5.29 18.17 4.77 5.91 7.07 8.47 10.68 84 I19_AR1 ActiveIntronRegion 0 10.68 6.77 8.43 12.21 6.32 9.45 4.83 13.00 8.70 8.07 8.92 2.76 6.49 6.20 4.78 8.94 5.32 18.24 4.79 5.94 7.10 8.50 10.72 85 E20_Aa NovelBoundary 0 28.45 16.12 6.03 8.66 7.56 9.37 4.15 4.76 8.45 7.28 9.90 12.45 6.82 2.41 4.45 6.84 0.00 20.89 0.00 11.89 2.72 11.08 4.35 86 ER20a ExonRegion 0 103.59 97.63 145.80 162.37 134.76 283.26 78.15 214.18 263.51 210.49 437.85 201.34 165.86 402.13 343.87 390.52 314.14 546.85 198.89 217.48 465.00 343.98 309.09 87 E20a_E21a KnownJunction 0 193.74 134.12 236.92 255.55 126.49 318.91 92.83 331.88 344.67 265.69 497.65 281.34 233.10 409.68 472.84 555.58 362.69 854.52 280.38 264.81 495.70 395.08 459.51 88 ER21a ExonRegion 0 60.55 29.74 43.69 49.21 26.62 75.99 22.33 69.03 70.74 60.13 108.53 41.70 37.41 121.12 114.96 108.05 69.91 176.69 68.31 61.34 133.75 100.39 96.77 89 E21_Da KnownBoundary 0 45.56 9.41 4.91 1.33 7.13 20.78 3.71 15.81 3.76 4.38 11.95 13.20 15.10 0.00 6.06 10.17 9.35 4.02 12.14 0.00 2.90 10.35 6.83 90 ER21b ExonRegion 0 1.25 2.11 0.27 1.95 1.58 3.26 1.47 3.24 2.18 1.26 1.54 0.00 0.29 0.52 2.55 0.88 0.73 0.85 0.47 0.94 1.46 1.70 1.09