Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	PDLIM7	Gene	0	55.36	16.39	162.35	87.44	27.89	61.63	30.19	81.87	45.32	114.32	79.33	13.61	27.05	59.22	75.15	63.91	26.39	250.18	64.47	45.75	513.85	252.83	305.60
2	463411	Transcript	0	4.74	4.52	20.22	21.65	2.14	22.27	2.89	17.77	11.95	26.04	5.74	1.58	1.27	5.84	7.14	5.09	1.26	42.63	11.68	9.76	58.09	25.91	34.87
3	486828	Transcript	0	1.63	0.00	0.00	0.00	1.66	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.41	1.24	0.00	3.93	0.00	0.00	0.00	0.00	10.32	8.42	5.93
4	460994	Transcript	0	19.66	3.61	78.38	40.40	10.95	18.51	10.79	24.16	12.96	50.79	16.07	5.16	14.77	14.86	18.54	16.74	6.62	125.60	25.81	19.85	205.42	82.60	123.11
5	356618	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	393546	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	393551	Transcript	0	9.51	5.85	30.41	22.67	7.45	11.58	8.48	14.24	12.27	17.33	13.46	2.58	5.92	9.51	9.82	17.59	2.95	57.85	10.56	12.55	75.48	57.70	60.86
8	355841	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
9	355572	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
10	493815	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
11	359895	Transcript	0	10.52	0.00	1.83	1.63	0.00	5.28	3.80	4.56	2.98	1.21	7.63	24.16	0.00	14.83	13.35	16.66	0.00	4.35	0.00	0.00	17.92	13.96	4.27
12	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	1.83	0.00	0.00	0.00	0.00	1.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.12	0.00	0.00	1.39	0.00
13	E1_Ad	KnownBoundary	0	21.71	3.35	1.83	0.00	0.00	36.97	2.25	3.49	4.63	4.54	9.74	0.00	0.00	12.07	0.00	8.12	4.39	20.77	14.40	6.14	35.03	25.72	29.11
14	ER1b	ExonRegion	0	36.22	11.52	18.38	8.10	11.89	54.10	18.61	5.09	2.47	13.32	16.43	0.00	0.00	16.15	19.50	18.66	8.80	45.68	30.97	10.76	119.25	74.43	114.86
15	E1_Ae	KnownBoundary	1	459.27	133.92	218.27	141.57	193.21	630.83	324.15	93.28	42.27	142.37	173.46	5.40	0.00	102.07	84.80	177.73	110.80	568.16	350.79	146.56	1439.66	766.09	1229.14
16	ER1c	ExonRegion	1	197.68	72.19	118.49	61.06	79.47	324.22	138.35	42.17	23.96	86.71	98.00	0.00	0.00	106.70	161.60	102.84	63.71	308.76	196.22	82.55	825.29	414.41	701.56
17	ER1d	ExonRegion	1	223.47	81.34	137.24	70.08	86.29	364.01	154.57	48.11	28.41	100.55	108.73	0.00	0.78	125.46	184.71	116.90	75.37	353.69	218.20	91.84	934.92	487.37	800.48
18	ER1e	ExonRegion	1	189.78	69.70	148.53	73.22	75.81	313.75	137.21	52.95	33.24	113.16	94.77	0.00	9.52	82.73	102.77	103.30	64.82	365.57	198.36	81.95	811.23	424.34	699.90
19	E1a_E2a	KnownJunction	0	16.89	5.66	195.29	102.28	15.37	31.06	19.17	70.57	47.51	149.03	11.58	0.00	6.33	19.01	14.46	22.13	3.65	391.28	37.27	14.89	52.20	41.70	69.91
20	ER2a	ExonRegion	0	27.02	12.79	110.04	42.75	14.75	32.13	9.70	59.30	30.00	88.99	86.28	7.04	15.30	29.98	40.67	24.55	23.85	158.65	34.44	27.90	625.92	83.89	92.24
21	E2a_E3a	KnownJunction	1	54.75	14.93	221.07	92.30	14.26	21.92	7.99	112.30	59.55	186.13	256.75	24.91	33.93	88.41	98.15	35.29	105.84	197.69	94.87	74.53	1143.56	199.38	190.53
22	E2a_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	ER3a	ExonRegion	1	28.98	16.39	229.99	118.42	19.86	56.65	25.37	136.85	74.16	164.02	148.02	8.94	24.81	100.65	137.77	93.43	44.37	447.08	156.38	76.97	679.22	402.17	493.20
24	E3a_E4a	KnownJunction	0	20.89	17.50	196.62	135.48	131.58	313.23	104.05	124.58	69.53	151.82	134.03	6.30	38.63	100.42	131.65	78.10	54.70	299.92	42.07	52.80	713.65	226.26	305.26
25	E4_Da	NovelBoundary	0	7.33	15.92	81.93	78.58	74.45	313.00	41.34	65.35	48.15	85.93	31.17	0.00	0.00	18.95	25.47	6.75	0.00	153.54	43.11	21.48	187.43	76.60	130.43
26	E4a_E4b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	E4a_E4c	KnownJunction	0	34.15	15.26	115.87	27.34	39.73	89.55	145.16	58.98	28.18	74.54	95.66	6.30	39.28	78.52	69.72	51.70	24.68	132.40	66.83	35.22	512.50	314.43	207.52
28	E4a_E5a	KnownJunction	0	10.52	0.00	1.83	1.63	0.00	5.28	3.80	4.56	2.98	1.21	7.63	24.16	0.00	14.83	13.35	16.66	0.00	4.35	0.00	0.00	17.92	13.96	4.27
29	ER4a	ExonRegion	0	27.51	23.42	189.66	102.70	103.75	311.86	128.17	118.09	69.76	142.73	141.10	21.37	35.55	107.82	100.33	72.48	37.69	224.83	69.77	54.77	718.20	323.89	302.57
30	ER4b	ExonRegion	0	10.82	11.18	56.21	64.00	6.43	60.06	7.41	51.75	35.86	74.92	14.57	4.73	3.82	9.32	13.56	13.84	3.78	115.01	25.35	28.09	146.72	68.34	92.67
31	E4_Ab	KnownBoundary	0	3.19	9.47	20.14	10.92	4.07	38.56	2.21	12.90	5.76	15.98	2.68	0.00	0.00	2.47	0.00	3.33	0.00	47.38	9.51	6.20	55.48	12.19	37.90
32	E4_Ac	KnownBoundary	0	6.59	9.74	16.41	17.75	16.30	41.74	3.53	6.65	4.51	14.67	4.74	0.00	6.33	2.47	5.19	3.42	8.60	49.91	8.00	15.02	37.19	48.37	28.00
33	ER4c	ExonRegion	0	5.42	9.02	22.52	13.20	10.70	47.91	10.84	10.69	8.18	24.23	13.05	1.89	5.86	9.74	14.14	6.32	8.05	57.40	14.93	14.49	96.55	61.59	54.33
34	ER4d	ExonRegion	0	56.12	32.86	172.89	65.13	21.90	87.04	69.98	92.91	42.39	127.70	132.49	12.00	43.52	98.23	118.36	81.66	53.68	228.01	90.30	52.22	697.53	309.84	377.43
35	E4_Db	KnownBoundary	0	16.89	6.38	11.56	3.56	0.00	14.20	4.02	10.64	4.48	19.45	5.16	0.00	0.00	11.48	14.09	4.36	0.00	57.33	16.66	3.26	49.11	29.21	36.54
36	E4b_E5a	KnownJunction	0	12.59	15.00	57.54	51.74	0.00	35.55	5.56	51.01	34.29	69.30	2.68	0.00	0.00	4.36	13.72	0.00	0.00	117.73	17.04	20.84	24.83	16.78	20.66
37	E4b_E6a	KnownJunction	0	18.74	3.35	156.68	40.79	11.80	16.98	42.00	93.77	28.33	63.34	69.81	19.06	33.76	66.34	90.74	90.32	26.09	171.41	60.43	20.20	349.29	227.91	354.77
38	ER4e	ExonRegion	0	3.40	2.37	4.47	0.94	0.00	4.93	1.27	1.55	0.00	3.20	0.72	0.00	0.00	8.19	7.86	1.42	0.00	12.90	7.57	1.20	27.55	7.99	11.93
39	E4_Dc	NovelBoundary	0	9.93	0.00	11.38	12.42	8.57	15.90	3.89	6.70	17.59	19.90	9.32	0.00	14.61	2.47	9.27	0.00	13.00	78.39	16.57	12.34	60.97	14.76	23.65
40	I4	Intron	0	4.66	3.45	17.64	14.45	4.08	15.85	6.06	13.10	11.22	23.17	7.53	0.60	4.63	8.64	6.71	4.03	2.80	37.35	4.86	9.73	83.61	37.07	44.76
41	I4_AR1	ActiveIntronRegion	0	4.69	3.47	17.75	14.55	4.11	15.96	6.10	13.19	11.29	23.32	7.58	0.61	4.66	8.70	6.75	4.06	2.82	37.59	4.89	9.80	84.16	37.32	45.06
42	ER5a	ExonRegion	0	9.96	9.93	37.84	37.12	2.68	33.22	5.22	28.27	21.07	43.18	8.07	17.57	0.00	18.34	14.68	13.11	1.55	83.69	12.55	22.03	34.48	31.25	26.08
43	I5	Intron	0	26.46	16.14	47.10	45.54	11.68	58.95	10.51	47.02	41.27	75.97	9.97	2.98	12.76	8.66	10.02	4.72	1.31	128.31	20.23	24.91	119.39	53.34	81.57
44	I5_AR1	ActiveIntronRegion	0	26.67	16.27	47.47	45.90	11.77	59.39	10.59	47.39	41.60	76.56	10.05	3.01	12.86	8.73	10.08	4.76	1.32	129.32	20.39	25.11	120.28	53.75	82.18
45	E6_Aa	NovelBoundary	0	34.45	29.80	42.52	56.94	16.98	82.62	18.55	53.97	44.65	81.71	12.53	0.00	0.00	0.00	15.20	19.40	0.00	107.07	12.71	27.93	59.86	31.41	78.02
46	ER6a	ExonRegion	0	63.26	39.02	203.68	118.67	31.19	89.68	56.58	118.18	70.29	165.72	159.37	25.57	51.69	107.92	145.30	109.53	44.45	368.26	96.05	86.69	832.55	408.28	423.39
47	E6a_E7a	KnownJunction	0	99.35	54.27	285.38	250.95	102.97	106.30	81.92	183.11	132.23	246.46	211.26	43.66	72.56	133.32	163.42	150.05	68.91	716.19	247.35	167.14	958.41	454.05	614.70
48	E7_Aa	NovelBoundary	0	44.01	13.22	27.79	11.52	11.63	14.48	17.22	10.56	4.20	16.52	12.95	6.75	8.28	21.31	27.07	13.07	16.92	69.02	26.17	19.69	76.30	80.40	165.95
49	ER7a	ExonRegion	0	111.72	47.32	368.24	335.09	119.47	152.95	115.86	263.66	182.00	400.89	243.65	33.70	52.22	167.59	188.82	185.96	56.83	1055.61	306.66	180.10	1075.77	575.78	671.78
50	E7_Da	NovelBoundary	1	27.12	0.00	35.54	19.24	7.89	8.12	7.99	19.10	20.75	26.84	12.53	0.00	12.82	19.13	43.39	44.18	4.49	58.28	49.04	2.56	224.81	139.31	115.92
51	E7a_E8a	KnownJunction	1	67.20	56.50	252.89	334.96	150.17	203.69	167.64	222.70	173.06	409.03	110.61	5.40	6.49	60.80	84.68	114.50	13.18	982.20	310.69	188.81	451.10	350.50	371.24
52	E7a_E8b	KnownJunction	0	3.26	0.00	0.00	0.00	3.31	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.82	2.47	0.00	7.86	0.00	0.00	0.00	0.00	20.63	16.84	11.87
53	E7a_E8c	KnownJunction	0	138.02	0.00	142.22	26.80	24.53	14.08	23.45	53.40	13.98	33.17	151.62	24.31	52.76	81.41	159.59	114.93	47.31	33.62	45.65	6.52	655.09	314.99	456.95
54	E7a_E9a	KnownJunction	0	0.00	0.00	0.00	2.06	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.30	0.00	0.00	4.45	0.00	0.00	0.00	0.00	0.00	2.53	0.00	4.01
55	I7	Intron	0	6.75	3.70	4.16	3.70	2.44	2.51	0.60	3.52	3.35	6.23	6.16	4.87	5.65	7.22	11.89	10.83	3.01	7.95	15.96	1.94	112.29	55.98	46.80
56	I7_SR1	SilentIntronRegion	0	7.95	4.37	4.89	4.36	2.87	2.95	0.71	4.08	3.90	7.30	7.26	5.74	6.62	8.51	14.02	12.67	3.54	9.32	18.81	2.28	131.92	65.53	55.18
57	E8_Aa	NovelBoundary	1	31.93	6.64	42.31	40.62	18.76	10.16	13.87	36.68	12.33	25.20	7.53	24.61	73.05	25.78	33.13	23.75	4.11	69.56	50.07	12.40	132.51	70.30	97.48
58	ER8a	ExonRegion	0	58.96	40.78	186.77	187.15	64.34	109.17	58.90	139.02	109.46	245.26	68.42	13.40	27.44	42.05	72.81	45.16	21.24	600.90	122.53	104.68	487.03	193.16	246.74
59	E8_Da	KnownBoundary	0	59.34	9.93	135.77	83.61	19.86	41.11	23.72	48.75	25.61	95.52	42.75	0.00	13.96	43.44	26.70	45.12	13.93	332.95	42.92	62.13	435.16	201.34	315.08
60	ER8b	ExonRegion	0	39.33	7.22	156.76	80.80	21.89	37.02	21.58	48.32	25.93	101.58	32.14	10.31	29.54	29.73	37.08	33.48	13.23	251.19	51.62	39.69	410.83	165.21	246.23
61	E8_Ab	KnownBoundary	1	55.86	20.85	196.39	117.83	31.75	38.33	26.41	66.75	37.99	137.77	31.17	12.15	61.68	41.62	61.31	71.18	20.38	445.46	35.30	52.41	459.31	226.99	424.94
62	ER8c	ExonRegion	0	25.04	8.41	167.77	83.44	20.90	33.88	21.19	55.69	28.38	107.11	37.43	14.69	24.91	29.10	42.76	53.72	18.33	291.46	44.07	41.67	478.44	206.57	279.10
63	E8_Ac	KnownBoundary	1	96.09	16.18	135.12	95.19	60.95	83.65	31.53	62.23	38.77	117.41	51.38	0.00	52.76	21.54	70.21	80.06	26.74	350.16	46.87	47.49	556.86	276.90	351.35
64	ER8d	ExonRegion	0	119.88	12.77	257.47	92.74	42.33	54.86	31.73	102.89	39.65	142.59	148.67	28.11	69.35	128.41	153.48	159.86	67.80	242.12	63.92	40.39	980.14	497.24	543.47
65	E8b_E9a	KnownJunction	0	94.31	21.05	278.82	91.13	18.59	25.84	14.93	113.41	36.89	128.32	97.02	53.87	39.12	90.65	142.41	130.22	49.74	109.60	39.44	44.81	610.48	360.05	485.12
66	ER9a	ExonRegion	0	70.48	9.71	214.35	57.21	28.48	38.42	25.10	68.98	24.46	85.99	107.91	13.58	36.00	101.95	107.69	83.33	39.62	154.59	49.03	38.83	711.26	293.04	386.69
67	E9a_E10a	KnownJunction	0	166.70	27.36	367.61	116.54	45.93	79.22	42.40	119.90	50.06	99.01	137.67	30.61	45.61	118.43	70.09	103.14	38.24	281.63	114.07	40.78	839.62	400.53	537.10
68	ER10a	ExonRegion	0	147.74	9.67	330.27	119.01	54.79	63.27	35.34	130.91	56.36	142.68	210.23	22.87	51.41	155.78	171.41	148.59	48.47	285.30	94.47	47.35	1157.34	556.02	676.81
69	E10_Da	KnownBoundary	0	17.19	3.22	38.05	36.26	7.72	11.19	2.25	9.45	13.51	18.48	11.69	0.00	6.01	14.60	0.00	20.17	0.00	93.06	12.99	7.73	68.63	58.42	65.13
70	E10a_E11a	KnownJunction	0	478.97	18.48	469.76	166.31	85.40	90.06	48.53	174.44	72.94	174.36	244.64	51.92	86.68	166.99	157.36	225.75	47.69	256.93	91.11	44.17	1364.91	729.17	785.26
71	ER10b	ExonRegion	0	9.51	5.85	30.41	22.67	7.45	11.58	8.48	14.24	12.27	17.33	13.46	2.58	5.92	9.51	9.82	17.59	2.95	57.85	10.56	12.55	75.48	57.70	60.86
72	E10_Db	NovelBoundary	0	35.86	9.01	78.47	48.51	27.67	15.50	10.64	24.03	20.63	47.38	34.96	0.00	0.00	17.07	15.58	21.70	7.57	79.13	18.35	23.46	140.30	67.36	128.81
73	I10	Intron	0	18.70	10.46	23.49	18.40	9.89	14.36	7.70	7.78	4.94	15.48	8.43	4.47	5.28	9.27	5.31	10.96	3.69	48.70	9.62	8.09	63.32	54.99	51.55
74	I10_SR1	SilentIntronRegion	0	25.71	13.57	27.18	23.62	13.31	19.77	9.29	9.26	4.41	16.37	7.61	3.05	6.09	8.51	6.51	11.18	4.52	56.42	11.99	7.65	65.23	62.38	54.24
75	E11_Aa	NovelBoundary	0	53.42	9.14	57.54	52.71	21.05	18.97	7.77	18.81	14.61	37.31	18.06	6.30	0.00	10.36	5.07	28.88	0.00	149.23	17.69	14.89	125.41	119.77	67.27
76	ER11a	ExonRegion	0	123.44	11.76	370.15	138.10	32.91	56.23	25.34	145.26	55.56	151.67	177.60	40.36	61.20	131.00	166.83	152.24	70.14	252.29	72.21	42.25	1077.52	676.40	673.41
77	E11a_E12a	KnownJunction	0	180.70	24.73	523.67	192.52	78.44	152.53	51.89	202.21	84.29	241.73	207.05	48.77	91.88	201.37	254.78	205.07	99.30	341.37	136.66	54.71	1485.25	970.61	1000.97
78	ER12a	ExonRegion	0	68.22	8.33	261.06	98.19	34.16	55.24	28.72	128.41	48.13	129.77	107.39	34.04	51.39	99.18	115.22	123.68	38.64	199.86	50.69	27.27	741.89	509.26	561.94
79	E12_Da	NovelBoundary	0	13.78	0.00	50.38	17.28	4.33	12.66	3.80	10.60	2.29	22.43	4.63	0.00	0.00	7.42	5.56	17.60	0.00	39.88	8.56	5.94	31.07	19.72	42.85
80	E12a_E13a	KnownJunction	0	152.84	9.74	334.73	137.35	58.15	62.63	48.67	183.81	60.16	145.05	227.79	79.68	207.29	148.21	273.44	260.27	66.67	278.28	97.13	48.96	1411.98	753.85	1072.33
81	E13_Aa	NovelBoundary	0	0.00	8.75	25.52	10.16	19.10	19.36	4.46	10.23	0.00	16.68	2.68	0.00	0.00	2.41	0.00	4.36	0.00	65.04	0.00	12.66	32.74	27.00	58.99
82	ER13a	ExonRegion	0	68.95	3.82	89.46	31.60	7.44	19.71	11.51	44.86	16.87	34.61	32.14	11.49	18.65	23.77	39.04	44.07	11.58	77.36	15.52	7.54	215.71	177.61	206.16
83	ER13b	ExonRegion	0	2.12	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.20	0.00	0.00
84	ER13c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.20	0.00	0.00
85	ER13d	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00