Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZFP62 Gene 0 23.50 41.10 6.27 25.95 31.18 24.35 24.58 19.75 21.36 44.43 26.97 43.36 23.00 41.73 17.92 32.34 29.34 58.52 23.41 44.64 15.25 12.08 11.60 2 359141 Transcript 0 10.65 14.43 0.33 9.09 22.65 10.81 13.70 8.20 4.59 13.58 3.47 11.11 3.00 5.45 4.29 5.73 1.15 8.24 4.40 12.51 2.04 0.95 1.03 3 389121 Transcript 0 16.57 20.23 1.31 12.32 15.18 5.37 8.95 8.77 6.16 11.49 24.28 18.69 15.55 29.86 23.07 20.95 27.27 25.31 11.24 19.48 7.00 13.13 9.16 4 405851 Transcript 0 47.12 39.86 5.20 24.81 10.53 45.14 32.28 31.09 24.31 52.89 50.28 37.06 12.82 34.32 0.00 33.24 35.81 60.60 16.19 43.27 8.15 13.23 13.57 5 ER1a ExonRegion 0 8.58 4.31 0.13 1.01 1.48 3.92 6.37 1.28 1.19 2.71 1.03 0.00 0.00 2.02 1.80 2.61 0.00 0.00 1.54 0.11 2.77 0.00 0.00 6 E1_Da NovelBoundary 0 23.71 9.74 0.00 3.06 4.33 27.03 10.60 4.15 1.13 10.93 0.00 0.00 0.00 4.18 0.00 12.56 4.11 33.45 18.35 21.22 8.03 2.51 8.62 7 E1a_E3a KnownJunction 0 3.33 8.81 0.00 1.90 4.33 8.63 2.25 4.15 1.71 7.17 2.68 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.80 0.00 2.90 0.00 0.00 8 E1a_E4a NovelJunction 0 7.19 39.60 0.00 7.72 4.33 23.05 21.29 2.05 8.13 6.42 5.32 0.00 0.00 4.59 4.45 4.36 0.00 14.14 16.57 17.96 6.24 3.12 4.01 9 I1 Intron 0 5.36 4.94 2.89 9.01 7.06 6.00 6.85 11.69 13.41 34.29 18.37 8.23 7.47 24.75 13.71 29.19 24.05 59.83 19.18 23.14 11.16 10.12 11.16 10 I1_AR1 ActiveIntronRegion 0 5.39 4.96 2.90 9.05 7.09 6.03 6.88 11.74 13.47 34.43 18.44 8.26 7.50 24.85 13.77 29.31 24.15 60.08 19.26 23.24 11.21 10.16 11.21 11 E2_Aa NovelBoundary 0 10.08 21.44 4.61 7.39 7.13 2.78 11.08 1.81 2.49 10.05 6.21 6.30 0.00 21.13 0.00 7.35 9.16 6.43 8.85 8.37 0.00 2.76 8.19 12 ER2a ExonRegion 0 21.50 21.28 1.67 11.34 11.38 9.16 11.63 7.26 7.03 15.15 20.22 16.96 17.36 30.63 15.56 28.42 24.94 37.10 9.80 23.89 10.32 4.99 8.62 13 E2_Da NovelBoundary 0 0.00 11.91 1.51 0.00 7.98 8.52 7.77 10.72 10.47 9.32 4.26 6.00 0.00 15.25 4.45 0.00 4.77 7.17 13.74 11.31 2.97 0.00 3.67 14 E2a_E4a KnownJunction 0 17.63 33.81 1.33 20.18 20.12 5.11 12.23 14.29 8.97 16.73 51.64 20.71 26.95 57.74 47.84 32.21 53.58 38.39 23.91 31.89 10.69 34.41 18.87 15 I2 Intron 0 11.43 9.12 4.34 11.03 10.97 4.27 11.98 16.89 10.18 21.92 3.45 13.55 8.78 5.39 7.42 9.46 5.52 11.81 5.38 15.46 1.56 1.14 3.40 16 I2_SR1 SilentIntronRegion 0 5.43 7.51 3.95 11.27 8.74 3.65 12.28 16.97 12.30 19.94 3.30 23.94 10.49 6.68 7.59 9.25 6.17 7.69 3.49 14.65 1.33 1.73 1.46 17 I2_AR1 ActiveIntronRegion 0 8.69 11.56 6.88 13.32 20.11 3.93 14.50 26.68 13.82 26.56 6.98 21.04 17.35 4.93 8.21 11.86 6.86 12.81 2.98 17.67 1.44 1.58 2.16 18 I2_SR2 SilentIntronRegion 0 13.59 9.17 4.03 10.59 10.06 4.51 11.48 15.23 8.97 21.71 2.90 9.37 6.85 5.11 7.25 9.12 5.12 12.82 6.32 15.32 1.65 0.90 4.16 19 E3_Aa NovelBoundary 0 16.74 25.32 3.40 11.92 34.55 5.62 8.04 19.51 16.93 17.68 5.11 12.00 6.66 4.83 11.25 0.00 0.00 7.17 0.00 12.40 0.00 3.06 0.00 20 ER3a ExonRegion 0 18.70 27.61 1.18 13.72 41.16 22.33 24.92 8.71 7.53 15.95 5.43 18.03 12.01 8.88 6.48 15.96 4.61 11.80 7.11 22.70 2.48 0.68 4.10 21 E3_Da NovelBoundary 0 10.96 16.25 4.85 17.71 7.89 5.28 16.56 4.52 1.59 10.10 5.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.52 12.02 0.00 0.00 0.00 22 E3a_E4a KnownJunction 0 12.00 16.97 0.00 19.71 43.63 8.35 21.24 18.65 7.93 28.47 4.74 26.41 0.00 10.89 8.90 4.36 0.00 21.18 4.14 27.23 0.00 3.12 0.00 23 E4_Aa NovelBoundary 0 9.78 6.31 3.08 5.39 11.97 13.57 18.90 6.33 7.58 2.53 4.53 5.40 26.30 7.24 0.00 12.30 3.74 4.68 0.00 7.99 6.24 3.12 0.00 24 ER4a ExonRegion 0 37.78 77.87 14.07 59.86 56.58 42.14 44.84 38.74 45.92 102.74 61.29 118.70 70.21 94.18 43.73 75.65 70.29 154.93 54.05 112.36 33.52 27.49 31.27 25 E4_Ab KnownBoundary 0 64.90 127.35 8.04 61.50 53.57 48.67 45.93 41.98 55.99 91.06 74.12 93.93 19.80 115.02 49.57 101.26 60.21 153.83 64.19 130.97 36.33 25.60 56.08 26 ER4b ExonRegion 0 50.55 107.69 18.73 61.30 72.29 49.82 52.08 51.20 54.36 104.46 69.26 82.13 38.45 100.93 43.72 89.74 75.18 164.52 61.02 105.15 42.49 27.57 29.48 27 E4_Da KnownBoundary 0 82.90 134.38 11.92 59.10 86.42 103.97 81.26 63.13 45.54 107.13 90.13 66.92 39.93 113.37 22.87 70.92 81.53 120.46 34.26 128.09 17.11 35.39 18.95 28 E4a_E4c KnownJunction 0 47.12 39.86 5.20 24.81 10.53 45.14 32.28 31.09 24.31 52.89 50.28 37.06 12.82 34.32 0.00 33.24 35.81 60.60 16.19 43.27 8.15 13.23 13.57 29 ER4c ExonRegion 0 53.37 98.34 14.66 65.85 85.77 71.98 63.87 54.54 57.26 116.75 69.33 99.42 50.92 106.70 35.48 69.32 67.37 118.76 56.90 107.51 36.58 31.88 22.79 30 E4_Ac KnownBoundary 0 26.60 41.70 6.95 33.20 46.18 46.39 46.72 24.15 21.21 71.21 33.75 44.71 25.00 40.03 11.25 30.93 48.15 36.69 31.06 60.47 40.28 18.98 11.78 31 ER4d ExonRegion 0 12.30 14.26 0.74 3.28 8.57 8.76 10.01 2.57 2.63 6.50 2.14 8.65 3.27 6.11 3.04 4.93 4.29 6.10 3.82 5.60 1.98 2.25 1.88 32 E4_Db KnownBoundary 0 0.00 8.75 4.02 7.72 4.33 0.00 2.25 1.73 0.00 3.68 2.63 0.00 0.00 0.00 0.00 0.00 0.00 4.44 0.00 0.00 0.00 0.00 0.00 33 ER4e ExonRegion 0 3.81 1.39 0.23 1.56 1.46 0.47 1.37 1.21 0.79 0.88 0.42 2.56 0.16 0.78 2.70 0.64 0.56 0.16 0.27 0.36 0.38 0.36 0.25 34 ER4f ExonRegion 1 10.58 5.59 0.92 5.45 14.05 1.83 2.98 4.75 2.47 2.58 0.97 18.40 2.35 1.22 5.80 2.23 3.30 0.46 0.00 2.66 0.00 0.00 0.00 35 IG10 Intergenic 0 11.09 14.10 2.76 8.15 13.99 5.68 7.39 7.74 5.65 11.76 3.51 3.97 4.28 9.59 6.66 8.48 5.66 11.91 6.30 8.87 3.59 2.16 3.12 36 IG10_SR4 SilentIntergenicRegion 0 10.39 16.96 3.98 13.74 17.51 8.15 11.12 13.09 11.53 24.66 8.42 7.71 9.57 20.04 7.52 16.92 10.56 30.67 13.04 21.16 8.57 3.75 5.13 37 IG10_AR3 ActiveIntergenicRegion 0 15.07 14.53 5.77 15.16 21.88 13.20 11.10 13.52 8.87 20.60 4.12 9.34 5.41 23.28 10.71 16.66 9.57 21.74 14.98 8.43 6.14 3.20 6.35 38 IG10_AR2 ActiveIntergenicRegion 0 45.47 73.24 10.43 25.64 50.48 13.39 20.32 17.99 13.61 23.09 6.24 8.24 6.07 14.71 24.22 14.94 14.41 21.49 13.30 21.69 7.65 8.54 7.37