Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TRIM52 Gene 0 88.02 87.80 29.15 67.34 64.51 37.90 38.61 50.85 45.06 54.41 35.72 48.17 37.80 44.29 35.22 33.93 28.35 52.54 20.60 48.10 16.39 15.17 19.21 2 327767 Transcript 0 48.58 47.47 18.95 40.89 38.91 26.59 24.65 33.18 32.62 38.02 29.03 31.38 27.28 37.46 26.94 29.23 25.48 48.50 16.27 37.44 15.21 12.82 16.37 3 IG25_AR7 ActiveIntergenicRegion 0 0.00 4.07 0.00 0.00 2.68 8.35 6.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.97 0.00 11.29 17.70 17.02 2.20 0.00 2.94 4 IG25_SR5 SilentIntergenicRegion 0 1.84 3.59 3.09 6.05 16.38 7.48 20.32 6.31 0.62 12.60 0.00 1.41 1.27 0.82 1.51 1.41 0.45 58.53 25.09 24.36 5.03 2.54 2.19 5 IG25_AR5 ActiveIntergenicRegion 0 6.31 8.89 5.17 7.59 18.47 8.91 31.12 4.59 0.95 11.92 0.25 1.12 2.84 0.17 0.56 2.30 0.43 35.88 38.02 27.13 4.06 1.06 4.92 6 IG25_SR4 SilentIntergenicRegion 0 2.51 3.43 2.30 3.59 4.36 4.38 7.63 5.15 0.94 7.40 0.35 1.26 2.12 0.83 0.91 0.68 0.71 26.43 13.22 14.14 3.29 0.98 2.64 7 IG25_AR4 ActiveIntergenicRegion 0 4.56 14.90 5.41 13.16 12.21 12.40 6.47 16.75 5.80 15.60 1.83 2.64 4.88 3.95 2.22 2.86 1.97 11.10 6.02 11.65 5.43 5.48 7.65 8 IG25_SR2 SilentIntergenicRegion 0 7.99 5.79 7.10 9.32 9.33 5.56 4.16 8.23 6.30 9.50 2.87 4.02 2.96 5.64 6.23 6.19 3.76 15.19 15.36 8.30 2.19 2.36 5.27 9 IG25_AR2 ActiveIntergenicRegion 0 74.21 52.58 19.58 16.40 50.11 44.81 25.32 13.59 18.72 31.38 15.96 4.15 5.47 22.90 24.06 22.97 16.71 73.82 56.39 24.50 20.20 11.84 42.26 10 IG25_AR1 ActiveIntergenicRegion 0 1.14 0.00 0.00 0.00 0.00 0.00 0.71 0.00 1.98 3.63 5.17 1.91 0.00 14.14 4.37 7.85 0.00 3.46 0.00 2.28 2.37 1.12 6.18 11 ER1a ExonRegion 0 30.14 24.40 15.49 44.37 41.00 45.51 32.37 42.59 57.15 53.30 57.15 43.95 49.70 84.15 46.55 64.44 58.40 115.24 35.16 68.16 40.93 20.15 39.64 12 E1_Da NovelBoundary 0 34.97 67.69 12.63 51.21 23.85 41.00 28.00 28.30 41.87 46.15 40.33 55.67 38.80 61.98 36.47 53.49 36.00 69.43 4.24 82.39 24.71 8.70 32.86 13 E1a_E2a KnownJunction 0 0.00 0.00 5.71 0.00 0.00 0.00 0.00 2.18 1.42 5.83 4.42 0.00 0.00 2.94 4.45 3.85 4.02 7.59 0.00 5.62 0.00 5.51 0.00 14 I1 Intron 0 57.30 50.52 18.82 50.79 58.24 43.08 55.49 30.22 45.48 47.89 48.04 60.97 65.46 62.59 36.57 41.22 34.84 44.87 29.07 57.12 16.69 17.54 29.87 15 I1_AR1 ActiveIntronRegion 0 57.38 50.58 18.85 50.86 58.32 43.14 55.57 30.26 45.54 47.95 48.10 61.05 65.54 62.67 36.62 41.27 34.89 44.93 29.11 57.19 16.71 17.57 29.91 16 E2_Aa NovelBoundary 1 147.43 247.72 77.11 223.91 112.99 64.34 75.61 102.15 64.00 127.22 61.23 232.73 86.52 62.10 54.52 31.96 37.31 29.14 7.44 72.29 14.52 37.84 23.73 17 ER2a ExonRegion 0 115.60 118.01 35.67 78.29 75.71 34.28 41.59 54.78 39.29 54.93 25.51 50.18 32.13 25.30 29.82 19.39 14.03 22.66 13.66 38.54 4.70 12.80 9.47 18 IG24 Intergenic 0 12.07 24.60 13.57 30.49 25.23 19.05 18.88 19.26 16.97 29.17 17.58 22.17 14.28 28.31 16.37 21.47 14.02 62.83 22.23 39.87 7.07 6.95 12.34 19 IG24_AR14 ActiveIntergenicRegion 0 34.76 49.13 32.73 70.44 83.32 56.31 56.43 50.06 38.93 63.31 34.03 31.94 20.67 36.31 20.94 31.59 26.58 60.71 30.79 90.91 5.92 13.87 19.23 20 IG24_SR9 SilentIntergenicRegion 0 12.98 20.63 14.04 36.92 27.92 19.93 17.91 19.21 18.20 25.78 17.51 30.04 16.78 30.29 17.93 16.72 13.94 51.07 20.33 26.60 4.61 5.94 11.00 21 IG24_AR13 ActiveIntergenicRegion 0 37.30 86.12 33.02 74.12 69.46 49.43 51.13 57.29 50.83 85.16 47.29 90.74 77.99 77.69 36.19 67.84 40.27 190.74 60.18 125.56 20.84 23.32 36.29 22 IG24_SR8 SilentIntergenicRegion 0 14.06 37.51 16.91 40.48 30.64 24.08 25.56 21.95 17.48 35.80 21.15 30.48 14.97 37.50 23.67 29.50 17.03 75.39 29.50 51.97 8.78 7.41 13.89 23 IG24_AR9 ActiveIntergenicRegion 0 6.72 14.14 9.42 16.13 13.27 13.46 15.24 13.81 12.05 15.61 11.14 23.15 9.93 45.91 18.22 19.46 20.31 57.98 20.23 35.06 10.50 4.13 9.32 24 IG24_AR8 ActiveIntergenicRegion 0 4.92 17.86 2.42 18.52 11.23 6.82 13.30 12.17 9.42 15.18 12.27 4.33 10.91 20.20 16.46 11.57 10.26 44.06 14.47 28.45 3.69 0.82 2.43 25 IG24_AR7 ActiveIntergenicRegion 0 22.53 51.57 11.03 62.50 25.04 15.46 29.51 29.51 24.00 48.83 36.45 17.94 15.75 51.51 24.45 43.31 33.01 138.19 31.85 84.50 17.00 2.08 17.62 26 IG24_AR6 ActiveIntergenicRegion 0 30.69 61.57 16.68 87.00 31.37 20.07 36.11 37.55 34.24 69.90 37.91 14.43 7.56 62.98 33.53 53.83 37.23 204.38 60.52 87.00 18.12 4.98 22.19 27 IG24_SR6 SilentIntergenicRegion 0 17.15 46.33 39.24 97.42 29.98 17.60 35.41 33.21 37.69 81.53 23.24 17.37 8.25 54.23 36.43 67.42 18.93 259.39 69.19 100.48 11.41 8.86 36.02 28 IG24_AR5 ActiveIntergenicRegion 0 19.40 35.59 22.73 45.55 26.86 18.67 26.53 17.44 18.11 39.22 24.35 16.03 11.90 49.92 19.94 35.44 19.45 109.63 33.20 55.63 10.19 5.02 21.17 29 IG24_SR5 SilentIntergenicRegion 0 4.23 20.34 2.45 14.99 0.00 0.00 15.89 0.00 0.00 11.47 1.93 4.33 0.00 11.37 0.00 17.83 6.60 40.65 0.00 4.26 0.00 0.00 2.94 30 IG24_AR4 ActiveIntergenicRegion 0 4.63 11.01 12.73 23.03 13.71 16.25 9.08 15.61 17.70 30.88 17.13 2.68 3.59 27.21 18.41 21.88 12.85 87.41 28.02 32.54 10.81 8.00 16.26