Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 MGAT4B Gene 0 60.43 59.05 81.02 99.02 47.17 166.80 58.89 150.92 180.25 145.24 144.45 51.05 43.56 179.28 169.43 120.03 107.45 273.60 156.82 126.13 331.06 191.56 193.82 2 292591 Transcript 0 2.48 1.56 2.04 3.19 2.82 1.78 2.13 6.50 8.90 8.43 11.07 1.78 1.22 3.79 4.85 2.85 7.28 7.72 15.15 3.33 16.89 4.21 8.68 3 429098 Transcript 0 0.00 3.35 6.62 7.59 4.33 8.63 0.00 4.27 7.00 8.92 7.79 0.00 0.00 12.36 8.90 19.57 7.76 13.10 3.76 6.26 16.49 6.06 15.96 4 337755 Transcript 0 17.77 8.23 13.97 16.79 11.35 48.63 11.94 31.13 31.95 29.98 21.45 9.67 8.18 35.39 26.02 22.18 23.75 68.63 30.04 26.49 54.33 43.91 56.41 5 IG42 Intergenic 0 10.42 11.50 6.58 14.29 8.57 7.03 5.78 15.76 13.47 10.96 7.76 6.01 6.74 14.85 15.26 10.22 8.82 21.54 13.67 11.64 5.38 3.98 6.07 6 IG42_SR8 SilentIntergenicRegion 0 2.26 4.47 2.81 5.14 2.54 2.73 1.34 7.15 6.55 3.72 1.36 2.12 0.69 1.07 2.77 1.42 3.10 16.61 11.13 6.56 3.97 1.24 4.12 7 IG42_SR7 SilentIntergenicRegion 0 3.44 2.39 3.18 2.94 0.73 1.46 0.96 5.82 6.55 6.66 0.03 0.97 1.57 0.88 3.27 2.95 0.60 14.83 6.13 5.90 3.39 0.71 3.47 8 IG42_AR6 ActiveIntergenicRegion 0 6.65 5.45 3.40 9.93 5.61 5.12 3.55 8.70 7.29 6.37 1.13 1.13 3.24 0.60 7.07 2.42 1.15 22.78 11.50 12.14 4.35 1.21 5.47 9 IG42_SR6 SilentIntergenicRegion 0 2.92 6.35 4.99 13.32 4.37 8.68 4.35 7.51 11.40 6.85 0.35 3.25 5.08 0.57 4.81 2.71 3.01 16.07 19.00 8.03 2.68 1.58 4.81 10 IG42_AR5 ActiveIntergenicRegion 0 27.32 29.34 13.62 30.85 20.85 14.90 13.67 34.61 28.29 23.48 22.94 16.44 17.30 41.10 39.91 25.40 22.73 39.33 27.25 25.46 10.53 10.50 11.35 11 IG42_SR3 SilentIntergenicRegion 0 6.27 6.91 7.48 17.71 9.56 8.15 6.81 17.52 13.48 9.39 2.70 1.86 4.67 13.80 9.34 9.85 7.19 17.45 5.00 3.15 2.69 1.82 4.10 12 ER1a ExonRegion 0 0.00 1.06 1.19 0.27 0.00 1.04 0.00 1.70 6.19 5.76 20.64 2.60 1.58 5.85 6.08 3.31 12.49 4.64 19.24 2.60 32.44 5.95 14.45 13 E1_Ab KnownBoundary 0 0.00 2.89 6.62 1.63 0.00 2.84 0.00 3.82 15.54 9.67 30.69 7.50 0.00 2.47 0.00 7.86 14.03 14.26 25.98 5.62 73.45 0.00 15.71 14 ER1b ExonRegion 0 3.67 10.19 18.33 16.23 5.75 26.52 3.13 22.49 41.61 36.93 51.39 5.92 6.99 52.42 50.34 22.55 30.82 69.08 35.98 36.63 116.31 35.50 43.92 15 E1a_E2b KnownJunction 0 15.71 17.56 50.65 57.07 7.30 61.95 15.68 103.22 162.76 135.46 151.78 42.16 19.15 102.66 69.97 70.67 99.11 280.85 92.61 139.21 329.64 97.12 95.18 16 I1_AR5 ActiveIntronRegion 0 5.21 3.39 12.65 7.62 10.75 36.53 8.88 26.44 24.77 18.63 23.45 7.70 6.84 38.48 27.19 18.18 21.84 64.39 26.46 23.41 57.93 24.53 38.97 17 I1_AR6 ActiveIntronRegion 0 0.00 9.66 17.16 5.28 16.05 65.79 10.76 18.36 18.22 11.90 16.67 0.00 4.69 40.60 29.01 4.46 16.50 41.34 35.44 15.16 39.94 25.00 41.48 18 I1_AR7 ActiveIntronRegion 0 10.34 6.87 16.54 10.65 10.37 38.50 10.50 33.88 27.03 21.02 25.21 4.41 6.12 44.73 30.17 23.79 25.76 75.76 33.39 26.10 50.52 31.57 46.62 19 E2_Aa NovelBoundary 0 26.97 0.00 32.38 13.48 15.79 70.75 6.27 44.07 43.78 25.57 26.69 0.00 13.64 57.04 27.07 15.12 16.55 109.19 32.28 37.20 60.85 48.93 44.30 20 ER2a ExonRegion 0 17.77 8.23 13.97 16.79 11.35 48.63 11.94 31.13 31.95 29.98 21.45 9.67 8.18 35.39 26.02 22.18 23.75 68.63 30.04 26.49 54.33 43.91 56.41 21 E2_Ab KnownBoundary 0 17.78 11.58 9.46 18.41 4.16 22.54 8.26 21.19 24.83 19.31 15.32 18.01 0.00 14.19 29.54 11.71 35.06 34.12 31.91 23.39 47.45 31.72 32.18 22 ER2b ExonRegion 0 39.50 39.52 98.53 104.91 34.00 116.90 47.00 178.27 236.19 196.62 185.35 38.82 31.79 243.52 219.54 126.71 148.06 353.74 160.82 189.50 488.60 210.74 183.93 23 E2a_E3a KnownJunction 0 38.23 67.09 140.56 115.80 61.04 305.11 108.82 244.51 281.07 262.39 194.15 61.22 35.39 310.73 240.06 168.50 193.74 563.02 251.77 243.14 478.71 262.88 234.15 24 ER3a ExonRegion 0 43.59 54.08 81.47 108.54 46.70 213.80 59.67 167.19 219.46 183.07 175.89 48.05 57.78 255.98 241.96 155.92 117.90 404.04 193.58 190.67 485.88 247.05 240.37 25 E3a_E4a KnownJunction 0 15.56 31.24 125.72 160.02 30.56 68.48 35.95 236.79 305.99 238.51 132.67 40.36 32.14 199.19 239.69 136.46 78.07 362.14 111.72 240.33 333.47 223.69 246.36 26 ER4a ExonRegion 0 49.37 53.80 141.98 149.06 36.80 236.87 88.46 278.93 338.54 254.13 255.91 57.64 61.92 325.78 296.97 214.26 190.86 455.57 281.45 267.61 566.48 318.72 293.25 27 E4a_E5a KnownJunction 0 72.53 91.10 164.87 190.82 49.07 339.35 126.39 250.22 322.28 254.76 245.75 119.44 101.29 372.12 364.30 184.48 189.81 540.72 272.85 254.07 488.84 380.02 290.15 28 ER5a ExonRegion 0 86.60 101.07 181.90 229.20 90.24 297.74 121.10 329.91 436.86 331.43 307.45 92.58 117.85 359.76 342.41 233.09 247.99 836.91 304.37 267.13 666.04 406.24 401.57 29 E5a_E6a KnownJunction 0 175.07 149.18 227.17 303.39 142.95 293.92 136.82 434.40 522.74 413.43 309.71 159.20 139.60 402.79 382.35 351.79 328.10 1275.60 432.86 331.15 694.62 561.08 527.63 30 E5a_E7a NovelJunction 0 0.00 0.00 4.02 1.66 0.00 0.00 0.00 9.49 22.74 4.22 2.11 0.00 0.00 2.47 0.00 3.25 0.00 9.45 0.00 9.01 0.00 5.82 11.18 31 ER6a ExonRegion 0 128.66 151.75 209.39 232.66 101.68 408.12 146.45 342.16 425.11 350.49 406.43 178.50 130.99 456.61 373.85 421.96 293.35 826.75 578.53 336.23 842.26 610.91 633.39 32 E6a_E7a KnownJunction 0 172.85 158.52 234.79 262.14 128.01 480.41 191.53 312.57 424.53 347.24 407.58 162.65 87.49 495.26 362.32 350.51 274.99 715.28 523.03 337.93 882.86 664.20 510.98 33 ER7a ExonRegion 0 159.71 141.15 215.49 245.12 121.89 427.56 165.76 379.90 456.70 363.09 398.84 133.70 94.54 433.21 399.76 351.22 300.86 812.60 482.92 299.83 857.94 606.82 536.59 34 E7a_E8a KnownJunction 0 230.71 241.86 263.77 275.29 139.73 622.08 230.62 496.87 539.95 431.97 420.95 145.85 147.07 477.13 483.96 414.76 325.39 901.86 606.04 324.12 923.88 653.48 705.70 35 ER8a ExonRegion 0 173.89 184.30 213.56 303.41 116.13 497.47 185.62 384.27 487.63 369.66 432.38 223.51 170.80 441.27 364.70 347.40 296.68 749.40 438.44 323.53 887.83 479.34 550.68 36 E8_Da NovelBoundary 1 32.75 8.02 28.24 6.76 3.82 34.70 3.93 47.32 39.03 31.08 33.69 19.21 27.11 63.39 28.56 89.38 29.17 87.59 61.08 23.01 53.75 83.89 102.18 37 E8a_E9a KnownJunction 0 165.07 210.36 210.93 362.19 155.86 401.59 169.54 338.53 483.96 367.77 387.94 137.29 174.83 423.28 440.57 269.07 303.69 705.58 345.23 329.88 793.16 603.21 498.52 38 I8 Intron 0 24.52 3.93 14.69 6.21 10.33 20.65 8.73 33.15 18.36 14.02 19.59 11.19 19.80 23.07 23.20 35.38 20.18 49.21 23.57 12.32 37.60 26.14 40.16 39 I8_AR1 ActiveIntronRegion 0 24.65 4.06 17.72 6.50 11.00 21.04 7.63 36.47 20.88 15.07 24.05 12.42 14.36 24.82 24.60 38.65 25.85 55.85 24.41 13.24 40.60 28.93 44.10 40 I8_SR1 SilentIntronRegion 0 24.66 3.67 6.97 5.56 8.81 20.11 11.87 25.08 12.05 11.56 8.14 8.16 34.74 18.94 19.97 27.51 5.57 32.66 21.89 10.14 30.44 19.26 30.53 41 E9_Aa NovelBoundary 0 13.63 3.22 16.03 15.15 8.23 15.62 0.00 33.02 22.02 17.25 15.53 19.36 0.00 24.72 19.04 55.54 33.19 48.00 8.09 23.07 14.09 29.09 24.33 42 ER9a ExonRegion 0 195.29 183.12 236.52 331.63 149.90 472.80 179.33 392.20 500.76 390.02 394.58 171.53 150.05 481.10 398.47 336.76 274.50 736.86 392.65 328.23 882.29 491.97 505.51 43 E9a_E10a KnownJunction 0 353.40 222.33 243.31 388.10 164.77 592.84 237.73 406.67 515.01 348.13 444.06 201.22 148.37 556.07 504.24 331.71 282.09 783.47 489.05 361.58 905.90 496.85 593.62 44 E9a_E10b KnownJunction 0 0.00 3.35 6.62 7.59 4.33 8.63 0.00 4.27 7.00 8.92 7.79 0.00 0.00 12.36 8.90 19.57 7.76 13.10 3.76 6.26 16.49 6.06 15.96 45 I9_SR2 SilentIntronRegion 0 16.96 2.52 4.56 2.21 6.72 11.22 2.39 8.15 8.58 6.18 7.96 4.09 0.00 7.79 8.10 6.82 13.28 23.80 5.96 11.61 11.76 6.41 7.98 46 ER10a ExonRegion 0 237.05 182.51 231.90 353.33 154.52 547.85 194.29 402.30 496.21 352.96 427.17 172.10 112.56 510.38 437.36 330.65 292.13 815.32 453.12 345.74 882.59 526.61 589.53 47 ER10b ExonRegion 0 162.73 199.78 236.89 319.94 137.88 488.44 176.76 375.39 472.37 350.59 379.80 140.92 125.55 439.89 386.12 352.74 266.71 788.31 406.41 327.97 866.16 468.19 523.20 48 E10a_E11a KnownJunction 0 250.12 241.54 209.04 261.24 193.04 514.76 224.70 340.42 448.69 365.97 358.20 110.44 149.83 475.90 490.76 346.15 259.28 624.87 511.92 304.69 889.35 498.50 484.18 49 ER11a ExonRegion 0 203.21 183.12 218.57 256.49 162.88 477.43 168.85 385.90 437.39 378.40 378.28 144.21 138.53 412.17 387.12 313.50 274.06 695.05 404.74 270.40 854.83 475.94 490.15 50 E11_Da NovelBoundary 0 26.60 2.89 14.55 10.39 7.30 20.61 9.98 32.94 21.15 18.51 21.69 5.85 0.00 15.13 18.54 3.33 3.74 40.67 4.05 8.82 14.09 14.39 16.05 51 E11a_E12a KnownJunction 0 266.64 165.37 181.13 237.53 219.95 712.20 206.90 361.33 398.17 343.73 257.12 150.20 127.91 416.39 371.72 283.34 226.27 423.74 308.62 253.69 599.86 496.05 521.23 52 E12_Aa NovelBoundary 0 27.26 0.00 14.90 14.25 3.40 24.25 4.50 19.02 23.32 11.93 10.06 0.00 0.00 10.07 13.35 23.93 4.77 39.34 11.77 14.45 11.06 17.82 3.16 53 ER12a ExonRegion 0 146.71 124.67 177.18 252.51 115.77 405.15 133.40 362.19 382.15 305.76 262.75 135.80 102.11 354.74 407.72 243.98 205.07 393.69 334.87 244.06 619.72 446.08 416.41 54 E12_Da NovelBoundary 0 27.71 0.00 18.45 9.19 0.00 10.62 20.36 29.04 9.95 11.09 4.05 6.15 0.00 23.37 15.08 0.00 8.32 19.90 3.58 6.14 22.55 5.51 8.02 55 E12a_E13a KnownJunction 0 236.19 140.63 196.42 245.02 94.65 481.37 124.54 386.26 380.99 284.82 254.27 127.24 108.92 377.66 427.72 198.32 205.80 345.60 266.36 218.72 643.47 357.24 376.71 56 E13_Aa NovelBoundary 0 26.75 3.16 8.60 8.59 15.37 30.44 8.26 24.89 15.54 6.53 9.74 0.00 0.00 23.02 13.35 6.58 16.92 16.17 8.28 0.00 31.32 5.63 12.12 57 ER13a ExonRegion 0 83.34 78.32 124.93 142.44 60.66 234.83 82.46 242.45 257.93 205.78 170.18 81.37 51.22 306.66 325.63 140.67 144.56 231.54 197.17 162.28 473.60 240.41 243.27 58 E13a_E14a KnownJunction 0 117.80 104.59 138.97 213.46 82.77 224.59 140.70 341.57 339.87 248.20 184.68 86.73 27.43 295.55 332.28 145.60 131.65 397.95 215.54 211.95 618.51 244.14 278.63 59 ER14a ExonRegion 0 138.38 141.70 155.16 178.00 87.61 311.18 106.83 326.14 343.27 254.81 242.35 49.73 44.91 326.98 369.49 181.77 195.07 467.51 267.32 249.67 640.27 336.07 354.16 60 E14a_E15a KnownJunction 0 287.98 152.60 180.27 200.64 194.14 547.13 152.89 375.87 405.61 287.18 264.49 94.53 89.28 446.41 413.38 165.17 213.84 511.74 330.74 224.99 650.14 344.13 409.06 61 ER15a ExonRegion 0 109.14 114.68 128.11 140.92 78.76 271.95 89.02 302.01 327.05 244.75 215.92 47.70 37.52 300.70 363.55 162.03 156.85 431.67 215.19 184.37 507.49 270.35 274.07 62 E15_Da KnownBoundary 1 37.34 58.34 100.56 109.54 48.98 279.27 107.27 236.63 246.47 199.77 151.62 18.91 26.95 205.43 272.95 146.80 119.21 304.85 141.37 223.84 329.27 220.44 192.24 63 ER15b ExonRegion 0 37.83 38.88 42.56 49.19 33.42 88.46 37.56 94.15 107.78 94.02 87.25 25.38 18.41 137.48 154.97 61.59 64.71 90.71 70.04 76.68 178.04 137.77 98.74 64 E15_Db KnownBoundary 0 15.63 11.25 4.94 8.99 7.39 25.10 11.35 21.07 10.36 19.74 9.53 0.00 0.00 2.41 13.23 4.02 12.90 12.35 20.99 13.55 11.00 20.21 22.19 65 ER15c ExonRegion 0 4.96 2.06 2.88 6.11 5.63 2.52 4.26 11.30 11.61 11.10 1.50 0.95 0.87 1.74 3.63 2.39 2.07 10.80 11.05 4.06 1.34 2.48 2.91