Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FAM193B Gene 0 162.36 88.45 123.19 167.89 68.26 90.13 60.48 145.59 115.70 162.07 106.10 45.65 53.03 167.74 133.67 160.74 129.04 415.78 112.87 118.23 138.16 93.47 109.72 2 443375 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 398118 Transcript 0 72.75 54.14 37.88 59.07 34.72 49.46 23.36 50.07 68.00 63.56 26.74 0.00 13.15 21.72 52.04 60.75 23.00 86.64 31.81 25.76 64.62 27.80 45.84 4 329540 Transcript 0 95.66 61.97 71.25 137.90 40.96 53.34 43.77 65.89 35.09 80.29 58.41 24.43 27.99 94.89 66.57 109.02 76.96 275.06 51.29 81.25 45.93 52.78 61.62 5 442143 Transcript 0 0.00 5.06 3.67 0.00 0.00 4.94 0.00 12.53 21.38 20.01 13.06 0.00 0.00 24.25 13.97 13.50 4.68 27.94 14.40 15.53 25.64 0.00 23.47 6 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 ER1b ExonRegion 0 0.00 1.29 0.63 0.00 2.89 2.99 1.78 0.00 0.00 0.68 3.63 2.30 3.06 0.43 0.00 12.13 1.55 5.92 4.88 0.00 12.59 0.00 10.07 8 E1_Ac KnownBoundary 0 0.00 3.35 1.63 0.00 8.23 13.00 6.09 5.75 4.40 1.58 20.16 6.30 6.82 2.47 0.00 32.47 20.76 72.46 12.42 0.00 35.95 0.00 28.60 9 ER1c ExonRegion 0 4.47 4.25 7.05 2.37 1.28 4.34 1.23 11.35 13.47 15.06 15.66 2.82 3.99 28.24 19.31 23.41 19.54 60.11 21.11 13.43 26.97 8.82 23.79 10 E1_Da KnownBoundary 0 7.19 0.00 10.14 11.02 0.00 17.09 0.00 16.72 12.04 14.40 4.53 0.00 0.00 17.78 8.90 40.25 24.12 181.32 39.62 15.53 20.76 12.06 31.50 11 E1a_E3a KnownJunction 0 0.00 5.06 3.67 0.00 0.00 4.94 0.00 12.53 21.38 20.01 13.06 0.00 0.00 24.25 13.97 13.50 4.68 27.94 14.40 15.53 25.64 0.00 23.47 12 ER1d ExonRegion 0 55.38 31.56 55.27 59.25 27.51 40.34 31.55 59.96 57.85 79.31 69.94 16.17 21.94 121.87 67.00 85.16 77.03 255.68 72.99 70.60 71.04 47.53 65.56 13 E1b_E2a KnownJunction 0 0.00 0.00 0.00 1.40 0.00 2.78 1.90 2.38 1.62 1.50 0.00 0.00 0.00 2.47 4.45 0.00 0.00 2.03 0.00 3.13 2.90 0.00 0.00 14 E1b_E3a NovelJunction 0 143.43 56.04 50.29 72.29 39.90 67.18 25.79 98.54 104.17 115.51 67.28 50.72 26.13 101.42 63.91 123.90 55.63 267.62 87.34 57.65 64.74 86.95 99.11 15 I1 Intron 0 21.00 16.90 7.66 16.55 13.82 7.40 31.95 16.84 14.70 21.38 11.70 17.22 22.31 11.69 12.20 25.18 19.18 58.58 35.47 28.84 22.94 15.47 19.20 16 I1_SR1 SilentIntronRegion 0 24.90 21.10 7.23 19.17 15.08 8.19 35.87 16.37 18.29 25.21 12.30 17.65 22.18 12.21 14.01 28.66 15.11 73.05 33.01 30.18 33.21 16.44 21.53 17 I1_AR2 ActiveIntronRegion 0 19.76 15.74 9.50 16.14 14.61 7.44 32.62 20.06 13.17 20.05 12.54 17.50 25.27 11.99 11.86 26.42 25.35 53.01 45.71 32.47 16.68 16.99 20.67 18 E2_Aa NovelBoundary 1 30.67 36.24 21.41 20.04 15.53 21.98 69.07 20.99 15.89 19.23 11.85 31.51 57.95 4.59 15.20 32.47 27.12 23.75 4.80 23.84 9.20 18.19 10.67 19 ER2a ExonRegion 1 29.63 12.77 1.73 15.60 15.28 9.07 26.80 6.15 3.47 10.40 4.51 31.89 10.89 8.19 9.70 13.61 15.29 19.75 17.13 17.47 7.74 4.07 13.80 20 E2_Da NovelBoundary 1 47.86 58.74 12.45 31.46 20.97 15.67 69.38 23.41 10.68 15.31 14.27 44.86 19.97 21.19 14.09 28.28 30.39 56.87 52.14 9.27 17.05 25.53 14.85 21 E2a_E3a KnownJunction 0 0.00 0.00 0.00 1.33 0.00 0.00 1.63 2.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.72 0.00 3.03 0.00 0.00 22 I2 Intron 0 16.80 18.54 12.20 18.34 15.83 10.57 25.79 12.31 14.16 16.77 8.07 16.28 17.80 9.44 8.87 17.38 19.51 40.08 18.22 21.68 19.24 10.59 17.71 23 I2_SR1 SilentIntronRegion 0 19.75 18.78 11.84 18.47 16.47 8.74 28.25 12.07 12.55 16.14 7.24 16.66 17.37 6.81 10.81 16.66 18.91 33.03 18.22 18.39 16.24 8.48 13.07 24 I2_AR1 ActiveIntronRegion 0 15.77 32.87 19.56 27.85 22.40 13.41 21.29 15.82 15.84 23.77 9.39 21.28 13.26 12.50 15.16 21.05 12.98 62.37 24.22 24.60 25.26 10.72 16.57 25 I2_SR2 SilentIntronRegion 0 13.43 19.14 9.19 8.79 0.86 6.65 6.25 0.69 3.26 5.28 1.66 7.44 6.85 3.00 8.59 4.80 8.80 10.68 11.56 5.29 10.26 2.88 10.05 26 I2_AR2 ActiveIntronRegion 0 15.50 26.92 20.50 21.15 18.20 8.32 18.49 13.96 14.03 22.43 6.28 5.61 6.03 9.15 5.13 14.37 15.00 46.64 15.96 20.79 27.41 5.75 19.17 27 I2_AR3 ActiveIntronRegion 0 11.02 24.26 16.85 23.91 20.68 4.38 20.91 20.86 18.02 34.33 9.53 8.66 13.64 9.30 8.57 30.67 26.26 85.63 36.63 29.84 36.26 8.71 27.83 28 I2_SR3 SilentIntronRegion 0 14.09 20.18 16.96 22.34 13.77 4.44 22.16 14.94 17.52 21.69 9.08 11.11 10.24 10.45 18.93 32.93 31.49 77.68 25.06 21.14 25.72 11.43 31.80 29 I2_AR4 ActiveIntronRegion 1 8.35 26.67 16.45 21.85 16.82 2.62 39.68 19.56 15.92 22.64 17.40 8.16 7.10 15.64 5.22 12.82 36.03 71.06 13.20 30.40 33.18 7.26 51.35 30 I2_AR5 ActiveIntronRegion 0 9.52 19.95 11.18 21.05 16.87 9.38 31.25 9.56 16.47 17.06 7.37 19.53 14.87 10.74 8.40 18.93 22.32 46.58 20.16 27.62 20.16 11.38 22.88 31 I2_AR6 ActiveIntronRegion 0 16.93 17.35 6.45 21.17 18.73 12.47 30.54 6.91 13.34 13.69 9.66 9.24 5.00 6.71 2.51 5.15 25.09 49.27 0.00 14.89 27.18 3.19 7.83 32 I2_AR7 ActiveIntronRegion 0 16.93 15.76 4.90 22.83 15.72 7.34 17.87 5.62 12.20 13.33 7.73 12.99 4.69 2.23 2.90 3.34 16.92 48.97 0.80 7.98 20.38 2.08 5.87 33 I2_SR4 SilentIntronRegion 0 11.62 12.93 6.50 13.47 11.28 11.45 21.76 9.76 14.38 13.76 8.46 14.50 14.72 10.19 4.86 17.15 18.96 41.18 19.21 19.16 24.66 13.59 17.24 34 I2_AR9 ActiveIntronRegion 0 13.22 20.32 13.04 13.98 15.98 11.19 28.81 10.20 14.04 14.71 9.55 16.71 28.46 11.19 6.83 16.02 19.01 41.49 16.38 26.23 13.14 9.75 16.21 35 I2_SR5 SilentIntronRegion 0 21.79 15.52 14.53 21.96 17.56 13.96 27.80 17.62 15.55 18.58 9.37 19.88 25.27 10.47 9.64 19.40 23.69 32.40 16.72 26.21 14.71 12.27 23.12 36 I2_AR10 ActiveIntronRegion 0 52.21 25.42 24.25 39.86 15.27 16.81 42.75 18.08 31.80 33.12 4.99 12.99 31.46 18.27 16.92 15.85 31.50 96.54 21.24 18.44 42.51 31.60 38.42 37 I2_AR11 ActiveIntronRegion 0 31.82 14.94 9.69 10.85 16.41 9.84 22.15 8.21 12.80 11.95 3.90 14.35 15.11 11.64 12.21 13.14 14.86 40.97 12.42 19.03 19.60 14.26 18.80 38 E3_Aa NovelBoundary 0 48.90 15.92 23.21 24.07 12.99 5.56 18.86 16.27 14.67 24.79 4.69 19.66 6.82 19.07 29.79 18.29 28.24 73.50 11.86 24.35 22.73 13.04 11.01 39 ER3a ExonRegion 0 242.95 158.71 169.30 206.07 86.97 129.22 92.08 250.38 207.21 298.56 210.21 98.31 115.30 283.82 178.40 232.68 221.77 712.80 199.49 206.59 276.15 158.80 144.23 40 E3a_E4a KnownJunction 0 142.32 210.16 285.18 391.73 85.14 204.20 120.52 402.48 374.50 417.30 241.53 184.26 240.57 377.60 250.08 312.99 308.93 888.76 194.08 285.26 383.95 228.83 187.88 41 ER4a ExonRegion 0 133.75 113.42 261.08 364.26 105.09 170.04 91.11 392.45 324.40 437.12 304.86 194.24 231.63 405.36 270.26 427.47 343.21 1148.03 319.08 255.60 382.12 252.70 260.49 42 E4a_E5a KnownJunction 0 237.75 133.73 232.13 286.08 89.81 173.03 100.29 316.89 255.96 368.38 187.52 169.26 135.87 286.42 201.13 265.31 298.08 843.91 265.42 164.91 268.42 157.98 200.09 43 ER5a ExonRegion 0 179.29 97.21 115.53 123.13 67.76 117.09 65.98 141.34 131.85 193.83 114.01 85.37 129.45 185.32 152.75 206.21 160.32 435.28 145.51 127.36 176.29 97.81 127.64 44 E5a_E6a KnownJunction 0 186.11 50.78 138.64 157.46 62.05 99.49 39.53 135.83 94.65 156.15 57.17 47.57 52.59 204.90 129.06 189.35 125.11 425.06 88.47 146.88 142.89 64.42 110.46 45 I5_SR1 SilentIntronRegion 0 7.38 5.29 3.09 10.89 12.50 8.53 13.60 9.84 6.07 6.54 2.13 12.57 15.83 4.07 3.59 6.56 4.48 8.41 7.53 9.21 4.46 7.25 5.11 46 I5_AR2 ActiveIntronRegion 0 26.20 28.28 4.14 21.48 8.15 14.76 21.50 8.64 15.23 10.43 1.93 16.70 8.04 0.08 16.44 2.26 13.05 15.22 13.50 6.18 12.59 8.04 4.34 47 I5_AR3 ActiveIntronRegion 0 23.56 24.54 2.45 18.54 6.60 12.96 22.07 10.03 13.83 10.40 1.93 7.50 2.81 5.85 14.31 0.00 16.50 8.38 12.53 4.68 13.22 5.97 5.29 48 I5_AR4 ActiveIntronRegion 0 20.11 22.03 3.27 19.08 4.91 12.84 22.73 10.66 13.38 9.94 0.97 8.66 0.00 9.74 12.09 2.48 17.05 8.62 12.74 8.51 14.69 4.86 8.32 49 I5_AR5 ActiveIntronRegion 0 17.54 16.56 3.68 18.69 4.97 11.00 18.91 13.09 14.82 9.18 0.00 9.28 0.00 9.98 8.70 2.97 15.09 7.39 8.19 10.33 9.13 4.46 8.81 50 I5_AR6 ActiveIntronRegion 1 17.28 19.66 5.11 15.33 7.80 8.71 17.21 14.26 15.13 8.60 0.00 16.96 6.64 11.64 3.63 5.45 12.93 7.39 9.56 13.30 15.98 10.76 9.79 51 I5_AR7 ActiveIntronRegion 0 19.34 24.41 6.79 23.75 22.43 13.43 24.63 12.71 9.45 13.85 1.22 20.18 17.90 4.21 8.11 8.71 8.33 11.32 8.83 14.33 11.45 10.38 8.76 52 ER6a ExonRegion 0 143.21 75.98 137.80 187.18 72.15 105.17 73.40 124.79 119.47 173.80 113.27 55.20 52.72 183.13 141.91 187.62 139.15 470.80 107.50 141.76 151.17 90.72 133.60 53 E6_Da NovelBoundary 0 20.82 24.47 30.69 51.11 8.40 36.00 40.19 26.25 22.68 28.88 20.85 12.30 6.17 33.73 19.53 30.93 44.23 127.72 53.18 57.53 27.68 10.23 19.12 54 E6a_E7a KnownJunction 0 47.64 36.11 74.57 122.86 43.12 39.69 29.90 55.08 34.46 84.51 55.86 39.76 26.13 95.94 66.38 82.12 56.29 177.13 30.49 60.85 28.91 52.60 57.79 55 E6a_E8a KnownJunction 0 15.56 43.68 54.58 51.94 14.94 37.36 16.08 22.59 34.92 34.81 35.75 6.30 5.84 49.62 43.76 49.90 37.87 95.47 71.34 23.39 32.87 10.53 30.22 56 E6a_E9a KnownJunction 0 72.75 54.14 37.88 59.07 34.72 49.46 23.36 50.07 68.00 63.56 26.74 0.00 13.15 21.72 52.04 60.75 23.00 86.64 31.81 25.76 64.62 27.80 45.84 57 I6_SR1 SilentIntronRegion 0 22.82 7.77 6.27 11.07 16.27 23.00 11.04 3.56 2.17 11.77 12.45 9.35 0.38 18.06 17.00 13.08 13.47 26.39 33.83 12.21 26.36 9.79 17.03 58 I6_AR1 ActiveIntronRegion 1 38.63 14.74 7.35 13.63 27.43 39.89 20.52 5.19 2.47 16.06 26.58 11.91 4.69 43.45 37.35 23.03 26.41 42.50 42.60 27.66 38.01 12.76 28.63 59 E7_Aa NovelBoundary 0 99.13 37.49 36.19 57.77 53.23 53.44 76.14 56.31 33.62 39.54 27.43 31.06 26.30 51.39 42.90 15.98 40.95 109.64 50.82 53.05 37.25 22.17 25.69 60 ER7a ExonRegion 0 91.38 67.90 75.83 156.98 55.64 66.39 49.76 82.38 50.62 96.78 71.03 27.23 31.37 108.01 77.57 108.33 91.57 299.64 76.40 111.83 65.27 58.48 62.95 61 E7_Da NovelBoundary 0 13.85 27.43 25.55 24.37 24.02 12.38 35.15 38.98 38.28 28.58 24.48 6.00 13.64 26.37 19.16 37.26 34.69 99.57 45.46 44.17 43.43 20.15 39.69 62 E7a_E8a KnownJunction 0 147.95 81.89 63.33 133.85 24.11 53.95 51.67 60.21 20.20 59.58 48.33 6.30 26.46 80.70 55.75 136.63 83.03 348.42 46.97 71.08 43.61 47.27 64.11 63 I7 Intron 0 15.54 10.79 7.82 7.87 14.74 16.46 15.67 8.41 7.51 5.23 13.01 13.87 4.73 15.26 10.55 18.19 14.14 32.62 21.44 18.66 19.78 6.38 10.18 64 I7_SR1 SilentIntronRegion 0 16.05 18.22 0.00 2.78 7.38 10.09 26.44 1.78 1.27 1.18 19.96 9.83 10.65 18.50 11.29 18.40 22.70 13.88 15.37 17.60 15.19 5.74 6.07 65 I7_AR2 ActiveIntronRegion 0 15.51 7.75 11.24 10.12 18.04 19.35 11.25 11.32 10.25 7.01 10.20 15.75 2.26 14.06 10.35 18.29 10.64 40.94 24.27 19.33 21.96 6.72 12.05 66 ER8a ExonRegion 0 204.60 106.09 116.64 146.44 63.37 91.85 62.22 95.99 59.78 123.45 70.04 18.51 31.40 162.61 93.30 143.91 112.15 320.08 87.29 92.68 87.96 59.13 96.75 67 E8a_E9a KnownJunction 0 499.57 209.44 206.14 238.03 217.74 293.41 127.06 156.86 91.20 173.53 152.04 30.46 31.98 227.68 158.11 189.61 171.11 527.95 119.72 133.65 152.90 96.50 175.51 68 ER9a ExonRegion 0 235.94 119.27 169.36 215.77 91.44 127.71 79.46 164.55 129.79 183.03 107.01 33.61 32.06 184.28 168.54 173.54 147.30 482.45 113.30 135.08 165.57 105.69 128.06 69 E9a_E10a KnownJunction 0 370.21 200.62 189.59 313.71 205.69 151.56 140.48 196.46 170.66 230.91 146.56 25.96 45.29 193.66 314.11 183.37 107.62 601.28 91.30 149.89 167.42 116.71 124.80 70 E10_Aa NovelBoundary 0 19.78 17.17 17.53 42.98 18.85 44.12 20.62 37.09 33.56 21.46 12.00 0.00 6.82 16.48 8.90 11.96 9.35 74.95 32.47 38.67 41.58 11.70 7.85 71 ER10a ExonRegion 0 342.04 176.15 219.26 346.51 151.25 139.85 95.46 268.32 193.91 245.23 146.32 40.22 45.11 223.40 280.62 327.52 160.05 803.84 178.00 175.48 171.45 185.21 222.26 72 E10_Da NovelBoundary 0 7.33 12.89 3.13 14.82 19.95 7.15 9.89 21.15 36.40 33.68 6.63 0.00 12.99 26.31 40.05 19.82 18.14 62.76 4.42 25.89 17.24 22.53 12.21 73 E10a_E11a KnownJunction 1 379.10 210.23 308.03 526.74 154.50 128.62 81.88 432.67 228.01 294.65 198.31 59.72 39.12 204.02 345.76 463.04 174.85 919.10 320.20 218.34 177.55 267.90 271.45 74 I10 Intron 0 54.60 36.07 10.39 43.83 37.58 26.16 25.74 40.17 28.57 37.39 12.43 12.95 9.46 27.52 26.11 27.46 13.42 75.78 24.48 25.79 33.71 16.94 22.14 75 I10_AR1 ActiveIntronRegion 0 14.83 19.00 5.21 26.62 26.04 17.37 17.70 18.72 19.59 23.73 7.78 6.11 5.51 19.91 23.61 14.27 8.14 51.86 14.05 19.60 23.44 12.44 13.72 76 I10_SR3 SilentIntronRegion 0 38.80 11.79 0.65 15.54 23.19 19.32 17.74 26.50 9.63 8.33 5.93 2.31 1.88 12.02 3.29 6.74 6.60 14.54 0.42 2.27 16.90 6.95 14.88 77 I10_AR4 ActiveIntronRegion 0 111.64 61.58 18.26 69.82 54.79 39.05 37.63 71.29 42.40 58.39 19.40 23.21 15.48 39.22 31.03 47.28 21.29 113.17 40.57 35.92 49.26 23.91 34.50 78 E11_Aa NovelBoundary 0 77.35 42.36 19.25 98.76 40.32 38.78 61.52 85.60 62.79 77.52 16.43 29.71 32.79 38.14 57.61 46.83 21.13 112.63 51.77 43.59 43.24 27.56 14.85 79 ER11a ExonRegion 0 360.13 204.25 327.09 571.20 145.04 161.56 123.56 442.40 290.45 358.01 239.56 86.28 60.59 243.50 332.90 341.64 208.46 764.14 215.50 250.28 250.19 232.48 204.31 80 E11a_E12a KnownJunction 0 300.87 144.18 235.83 407.61 102.89 116.47 65.45 257.33 221.76 283.07 131.14 25.96 34.90 225.91 274.93 229.77 132.77 439.12 113.89 158.13 185.08 136.49 130.26 81 I11 Intron 0 27.47 12.79 16.99 23.41 19.27 18.94 15.60 29.98 16.87 25.00 13.26 5.83 5.07 18.36 22.43 19.37 14.94 70.13 16.59 17.86 20.26 10.38 7.52 82 I11_AR1 ActiveIntronRegion 0 20.94 9.88 14.73 16.93 13.09 14.91 16.11 23.64 15.40 17.66 11.78 2.48 5.07 16.38 19.75 18.23 13.89 61.96 14.21 14.23 16.84 8.97 4.21 83 I11_SR1 SilentIntronRegion 0 32.22 14.27 19.41 26.28 21.18 21.76 16.23 33.91 19.00 30.16 14.87 7.80 5.15 20.27 22.90 20.67 16.20 76.26 17.47 20.44 22.73 12.13 8.85 84 I11_AR2 ActiveIntronRegion 0 21.60 12.62 12.07 24.62 23.57 15.81 12.33 26.95 11.52 19.08 9.90 4.59 4.81 14.83 25.81 16.64 12.13 62.39 17.78 14.86 17.27 6.38 8.66 85 ER12a ExonRegion 0 309.92 141.23 159.24 279.35 122.82 92.32 75.81 241.01 160.06 195.84 104.65 46.84 45.22 168.72 193.55 177.71 122.34 349.49 109.18 126.92 134.60 125.43 123.73 86 ER12b ExonRegion 0 19.05 14.24 1.84 4.09 10.70 14.67 7.28 2.59 5.56 3.44 5.80 6.49 14.07 16.24 20.31 5.94 11.55 8.31 6.37 2.13 3.31 2.08 4.40 87 IG6_AR1 ActiveIntergenicRegion 0 4.46 1.90 4.64 5.46 3.10 2.97 2.44 4.48 6.20 4.82 6.40 1.77 0.48 7.83 8.91 7.34 8.79 18.49 4.15 5.35 5.59 3.32 4.84