Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 BNIP1 Gene 0 36.92 58.22 49.72 43.79 32.69 42.17 28.30 40.00 17.61 42.20 73.76 44.88 13.53 55.15 65.23 55.23 60.49 53.01 30.01 35.23 32.67 31.74 23.23 2 352523 Transcript 0 1.14 1.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 351486 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 231668 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 393770 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 6 IG48_AR1 ActiveIntergenicRegion 0 94.68 47.94 13.45 82.28 90.95 63.13 30.67 42.87 53.63 32.54 12.65 33.44 31.68 11.67 26.33 11.72 18.66 6.84 9.37 16.01 7.58 69.74 22.70 7 ER1a ExonRegion 0 1.14 1.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 E1_Ab KnownBoundary 0 3.19 2.83 0.00 0.00 0.00 0.00 0.00 0.00 1.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E1_Ac KnownBoundary 0 0.00 2.70 2.42 0.00 0.00 5.22 0.00 0.00 0.00 0.00 6.63 0.00 0.00 2.06 0.00 4.19 0.00 0.00 0.00 0.00 2.41 2.69 0.00 10 ER1b ExonRegion 0 1.83 1.48 0.89 0.00 2.43 4.33 0.00 0.00 0.00 0.36 1.85 0.00 0.00 0.66 0.40 2.57 0.60 0.08 0.00 0.00 0.00 2.08 0.67 11 ER1c ExonRegion 1 75.16 140.29 36.51 38.22 74.05 88.38 83.50 28.84 19.60 32.23 53.76 8.56 7.04 55.45 64.40 94.95 69.93 45.91 48.72 36.33 29.44 52.88 45.42 12 E1a_E2a KnownJunction 0 50.75 94.79 33.56 33.20 76.57 42.99 42.84 16.84 29.37 33.07 56.75 76.07 42.69 14.48 20.03 65.28 30.48 31.05 24.00 34.13 8.28 25.29 16.90 13 E1a_E4a NovelJunction 0 0.00 5.99 0.00 1.66 0.00 0.00 0.00 28.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.14 0.00 0.00 0.00 2.45 0.00 14 ER2a ExonRegion 0 20.39 23.13 52.08 33.72 16.17 16.82 13.38 22.80 21.59 40.06 121.02 58.19 18.56 38.39 30.60 42.19 81.10 25.39 29.08 37.09 38.88 26.01 10.10 15 E2a_E3a KnownJunction 0 0.00 3.35 13.72 23.41 3.82 2.16 1.68 8.09 4.89 21.54 13.79 20.86 0.00 6.71 4.45 0.00 12.81 7.34 13.74 23.91 5.07 8.57 0.00 16 E2a_E4a KnownJunction 0 26.52 27.43 77.79 59.17 11.04 16.01 16.25 29.49 21.53 57.48 147.72 113.44 28.08 134.79 85.79 100.91 96.68 55.38 81.13 71.78 37.75 86.28 27.49 17 ER3a ExonRegion 0 10.02 14.57 7.91 15.29 14.60 14.06 12.57 9.70 9.01 18.48 11.61 9.57 4.69 7.98 10.05 15.30 4.25 15.40 18.57 20.90 1.13 12.40 5.80 18 E3_Da NovelBoundary 0 10.15 9.01 2.96 6.29 0.00 0.00 0.00 15.53 1.45 4.97 5.16 0.00 0.00 0.00 0.00 4.27 3.65 4.60 0.00 9.33 0.00 5.76 0.00 19 E3a_E4a KnownJunction 0 0.00 61.77 4.44 6.83 15.62 13.29 13.51 7.60 6.92 11.63 4.90 0.00 0.00 2.35 0.00 0.00 4.77 11.07 4.80 5.11 0.00 2.94 0.00 20 ER4a ExonRegion 1 33.54 96.82 74.87 70.04 35.28 34.34 32.74 56.98 21.74 60.20 120.39 106.68 15.75 96.81 97.26 146.93 62.54 96.50 72.19 59.53 42.42 71.52 59.88 21 E4_Da NovelBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 1.85 0.00 0.00 0.00 0.00 6.75 0.00 0.00 0.00 4.19 0.00 2.53 4.42 0.00 2.41 2.94 11.87 22 E4a_E5a KnownJunction 0 69.86 98.80 67.80 76.91 96.26 67.18 52.38 59.31 31.71 48.78 96.81 63.02 20.29 42.50 44.63 98.01 46.94 91.24 50.82 66.41 60.85 32.45 47.04 23 E4a_E6a KnownJunction 0 0.00 0.00 0.00 1.86 0.00 0.00 2.25 0.00 0.00 1.67 0.00 0.00 0.00 5.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.24 24 E5_Aa NovelBoundary 0 0.00 0.00 2.96 3.63 4.33 0.00 3.44 5.83 4.98 0.00 0.00 0.00 0.00 2.53 0.00 0.00 4.02 0.00 0.00 3.26 0.00 0.00 19.72 25 ER5a ExonRegion 0 40.73 114.18 51.77 60.66 74.24 128.87 80.97 86.78 24.70 55.55 114.55 95.25 31.68 73.75 85.25 80.66 85.92 81.26 46.41 47.41 72.98 39.12 25.94 26 E5a_E6a KnownJunction 0 59.27 158.59 68.86 83.11 74.53 65.13 48.58 94.35 29.31 64.55 123.56 125.59 25.97 74.17 113.85 99.03 105.94 76.19 43.48 63.66 104.40 52.97 16.99 27 ER6a ExonRegion 0 52.88 82.18 68.33 55.53 30.71 35.92 27.04 66.55 33.68 57.51 110.21 108.42 20.97 71.83 93.62 69.81 106.57 88.46 36.99 55.14 64.52 47.40 40.13 28 E6_Da NovelBoundary 0 0.00 0.00 3.40 2.03 0.00 0.00 0.00 14.25 1.79 0.00 0.00 0.00 6.17 4.83 14.59 8.72 7.85 22.63 0.00 9.14 2.97 11.94 0.00 29 E6a_E7a KnownJunction 1 106.09 114.72 55.82 42.52 44.82 42.08 35.95 59.72 17.62 51.09 109.61 46.82 42.85 86.59 114.96 49.30 122.49 76.65 16.85 55.74 56.22 51.44 40.29 30 I6 Intron 0 6.13 6.69 3.48 3.95 5.61 5.04 5.81 8.69 3.66 5.25 4.26 5.53 2.87 6.27 7.32 9.51 5.00 15.18 5.44 7.68 4.62 5.41 4.64 31 I6_AR1 ActiveIntronRegion 0 4.52 3.74 2.77 4.86 7.90 3.66 8.75 7.67 5.54 5.97 6.14 8.42 5.34 6.42 8.03 9.49 9.86 17.12 6.06 7.72 7.53 7.80 5.28 32 I6_AR2 ActiveIntronRegion 0 4.92 3.64 4.12 2.73 7.54 12.78 4.87 7.25 3.62 2.21 6.81 5.91 6.34 6.84 5.68 8.54 5.63 13.71 9.33 4.11 5.37 5.34 11.62 33 I6_AR3 ActiveIntronRegion 0 6.35 2.44 6.13 4.09 2.46 5.28 8.42 8.37 4.94 1.15 8.27 0.00 0.00 7.28 3.13 13.55 0.13 12.79 10.32 12.26 10.40 6.42 12.33 34 I6_SR2 SilentIntronRegion 0 7.62 8.54 4.12 4.19 5.99 5.60 5.87 10.03 3.42 5.81 4.11 5.52 2.50 5.52 7.16 10.05 3.10 15.58 4.63 8.10 4.31 5.22 4.38 35 E7_Aa NovelBoundary 0 24.23 16.12 12.54 1.66 10.44 9.54 0.00 8.75 2.69 14.13 11.32 0.00 0.00 2.47 10.01 8.72 13.18 7.88 0.00 0.00 5.56 5.76 4.35 36 ER7a ExonRegion 0 44.00 53.68 63.23 53.00 33.00 42.45 22.64 44.22 17.64 50.75 78.40 35.43 13.96 67.26 82.16 51.11 67.87 60.05 26.10 36.04 31.81 30.38 21.54 37 E7_Da KnownBoundary 0 34.30 5.79 23.54 11.55 23.01 5.00 12.72 14.38 5.01 14.61 11.42 18.91 0.00 20.90 14.34 4.27 12.44 14.01 11.29 14.25 8.90 8.21 3.41 38 ER7b ExonRegion 0 6.30 5.19 9.02 3.89 5.41 2.54 5.24 3.31 0.87 2.10 6.70 10.96 0.00 6.77 20.06 6.89 6.39 4.52 3.25 5.79 3.99 3.01 2.50