Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ADAMTS2 Gene 0 54.34 2.61 34.49 20.95 24.67 20.91 52.37 77.63 32.92 103.10 0.03 0.07 0.19 0.02 0.08 0.09 0.12 14.30 1.01 1.12 153.30 59.82 39.40 2 251582 Transcript 0 23.67 1.00 24.30 13.58 11.86 16.84 31.63 77.26 34.94 109.03 0.00 0.00 0.00 0.00 0.00 0.00 0.01 15.39 1.56 0.44 169.53 49.15 34.52 3 393460 Transcript 0 0.00 0.00 0.54 0.00 0.00 0.00 0.00 0.96 0.00 0.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.62 0.00 0.00 6.12 1.85 0.00 4 274609 Transcript 0 16.06 1.44 4.69 3.49 1.13 1.95 5.12 3.34 1.79 11.25 1.37 3.43 9.12 0.88 3.63 4.21 3.42 0.92 0.00 1.51 39.89 6.15 20.86 5 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.06 0.00 0.00 6 E1_Ab KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.40 0.00 0.00 7 ER1b ExonRegion 0 0.00 0.00 0.01 0.00 0.00 0.04 0.01 0.00 0.16 2.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.37 0.00 0.00 7.92 0.53 0.79 8 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.82 22.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.22 0.00 0.00 26.32 5.57 10.84 9 ER2a ExonRegion 0 3.23 0.48 6.96 1.84 1.37 5.33 7.60 16.03 12.74 41.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.13 0.00 0.24 101.62 25.01 18.78 10 E2a_E4a KnownJunction 0 13.71 2.63 14.96 1.63 6.79 14.14 40.41 51.88 31.48 81.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.91 0.00 2.36 166.06 37.84 38.07 11 ER3a ExonRegion 0 0.00 0.00 0.54 0.00 0.00 0.00 0.00 0.96 0.00 0.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.62 0.00 0.00 6.12 1.85 0.00 12 ER4a ExonRegion 0 6.03 0.83 13.80 3.90 8.22 10.46 22.46 37.43 23.88 73.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17.11 0.00 1.20 173.53 46.30 41.89 13 E4a_E5a KnownJunction 0 15.26 0.00 21.23 11.35 15.45 8.12 22.39 46.13 18.84 102.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.68 0.00 3.26 145.86 31.47 56.68 14 ER5a ExonRegion 0 9.40 1.63 23.76 13.68 8.88 8.50 28.01 59.40 36.79 129.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.41 0.00 1.29 225.56 75.04 67.40 15 E5a_E6a KnownJunction 0 0.00 2.89 21.55 22.51 11.71 13.06 66.77 75.66 53.91 177.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35.98 0.00 0.00 283.00 140.16 128.22 16 ER6a ExonRegion 0 19.63 1.19 29.50 21.25 12.01 19.10 42.38 83.62 50.38 188.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 35.31 0.00 1.11 362.90 87.86 85.20 17 E6a_E7a KnownJunction 0 27.78 2.76 37.31 28.93 15.96 18.74 39.79 90.08 38.02 177.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 31.63 0.00 2.43 316.11 119.59 89.46 18 ER7a ExonRegion 0 20.96 2.50 30.41 27.83 13.45 8.67 33.99 99.75 44.51 151.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.25 1.03 0.09 334.00 96.03 90.10 19 E7a_E8a KnownJunction 0 42.16 0.00 34.77 25.60 8.32 10.73 30.38 103.18 30.41 133.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27.82 0.00 0.00 343.73 71.34 70.51 20 ER8a ExonRegion 0 14.90 0.98 29.18 19.49 4.70 8.30 47.97 72.99 28.38 110.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33.07 0.00 1.02 260.37 72.75 72.78 21 E8a_E9a KnownJunction 0 11.19 0.00 23.89 19.31 7.30 20.05 56.79 61.57 35.47 96.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.36 4.71 0.00 210.04 54.50 38.50 22 ER9a ExonRegion 0 14.82 0.72 20.98 17.79 6.65 10.39 24.56 52.91 25.49 106.72 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.05 0.00 0.00 220.63 59.47 57.26 23 E9a_E10a KnownJunction 0 33.49 0.00 25.72 15.45 24.45 19.48 36.43 73.97 45.77 129.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 29.27 0.00 0.00 262.92 56.64 76.66 24 ER10a ExonRegion 0 20.54 0.00 14.28 11.97 7.89 13.24 36.72 63.95 43.21 123.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.55 0.00 0.38 242.72 46.50 62.22 25 E10a_E11a KnownJunction 0 30.30 0.00 18.45 24.27 8.15 18.68 55.78 103.10 49.16 149.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40.00 0.00 3.26 225.49 58.72 95.44 26 ER11a ExonRegion 0 28.41 0.00 16.32 17.81 14.65 10.07 44.00 71.34 42.55 140.57 0.02 0.00 0.00 0.00 0.00 0.00 0.12 27.75 0.00 0.50 241.58 52.80 66.49 27 E11a_E12a KnownJunction 0 16.15 0.00 6.03 3.70 0.00 0.00 2.25 5.05 1.27 16.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43.00 2.76 29.45 28 E11a_E13a KnownJunction 0 10.22 0.00 13.60 7.13 8.32 12.38 17.44 69.09 32.46 128.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 23.05 0.00 0.00 212.88 64.36 53.18 29 ER12a ExonRegion 0 15.96 2.88 3.35 3.27 2.27 3.90 7.98 1.63 2.32 5.65 2.74 6.85 18.24 1.76 7.25 8.42 6.83 1.85 0.00 3.01 36.79 9.55 12.28 30 E12_Da NovelBoundary 0 35.34 24.07 11.80 21.74 61.21 22.32 37.14 11.46 6.94 16.39 12.32 0.00 13.47 26.96 15.70 12.30 15.90 24.25 19.86 59.06 73.70 18.25 40.72 31 ER13a ExonRegion 0 14.24 0.00 11.47 9.05 2.16 10.15 19.87 53.01 26.80 89.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.95 0.00 0.00 159.83 36.46 26.05 32 E13a_E14a KnownJunction 0 10.15 0.00 14.67 3.50 4.33 2.90 27.12 40.54 12.50 62.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.79 0.00 0.00 162.29 23.70 15.19 33 ER14a ExonRegion 0 9.30 0.35 12.94 6.30 8.65 6.93 19.18 37.31 19.20 60.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.41 0.00 0.62 135.11 24.19 20.02 34 E14a_E15a KnownJunction 0 9.56 3.35 14.96 7.23 11.21 4.83 31.58 62.10 23.96 88.75 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.54 0.00 0.00 155.25 25.29 36.11 35 ER15a ExonRegion 0 12.51 0.32 23.23 9.11 7.11 5.78 27.97 59.71 29.85 98.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.31 0.29 1.62 168.37 26.54 40.43 36 E15a_E16a KnownJunction 0 7.33 0.00 33.29 14.72 7.47 2.90 14.18 68.43 42.62 98.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.93 4.05 0.00 158.89 38.33 54.63 37 ER16a ExonRegion 0 15.69 0.00 30.35 14.09 11.16 13.41 22.60 92.68 41.83 124.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.55 1.00 1.25 180.17 56.24 39.76 38 E16a_E17a KnownJunction 0 44.01 0.00 40.74 16.38 20.46 24.93 36.30 116.57 44.15 155.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.19 0.00 3.26 203.12 78.07 67.52 39 ER17a ExonRegion 0 22.11 0.00 28.56 15.75 14.37 17.95 35.68 94.04 45.68 122.19 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.74 1.89 0.76 206.44 71.51 63.48 40 E17a_E18a KnownJunction 0 24.08 0.00 16.08 22.71 11.63 9.65 53.08 98.99 57.84 127.70 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.61 0.00 0.00 196.33 49.48 50.88 41 ER18a ExonRegion 0 21.47 0.69 17.02 13.74 18.68 29.27 47.61 98.90 41.13 135.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.64 0.06 0.65 202.73 72.54 40.60 42 E18a_E19a KnownJunction 0 9.48 3.29 19.34 27.14 10.70 23.23 30.43 119.24 29.98 135.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.13 0.00 0.00 188.98 49.78 34.66 43 ER19a ExonRegion 0 17.73 3.81 20.74 18.70 13.81 29.38 40.14 87.59 43.28 118.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 30.31 2.03 0.00 220.25 45.20 35.63 44 E19_Da NovelBoundary 0 11.04 0.00 7.89 3.93 0.00 0.00 20.49 6.70 4.83 34.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.04 0.00 0.00 30.95 17.45 8.19 45 E19a_E20a KnownJunction 0 20.08 0.00 30.45 13.92 8.66 36.80 17.00 104.86 39.58 78.30 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16.46 0.00 0.00 162.78 67.54 23.90 46 I19 Intron 0 5.41 0.40 2.87 4.79 2.63 2.67 12.75 15.69 8.53 36.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.97 1.00 0.00 35.32 15.39 10.73 47 I19_AR1 ActiveIntronRegion 0 5.41 0.00 3.43 5.07 3.68 3.89 13.81 20.36 10.11 45.35 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.49 0.26 0.00 39.96 19.00 14.72 48 I19_SR2 SilentIntronRegion 0 6.19 1.00 2.72 5.25 1.94 1.61 12.81 13.03 7.66 33.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.34 1.88 0.00 35.32 13.60 6.89 49 E20_Aa NovelBoundary 0 13.19 0.00 4.76 5.53 0.00 2.78 19.21 33.15 20.20 53.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.51 4.80 0.00 46.64 11.21 20.40 50 ER20a ExonRegion 0 28.87 1.47 24.42 16.40 15.27 19.61 33.90 78.21 35.11 116.60 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.84 2.75 0.00 218.42 61.53 29.23 51 E20a_E21a KnownJunction 0 28.30 2.43 29.42 14.58 7.47 8.35 41.78 122.28 40.13 112.98 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.13 4.14 0.00 208.19 62.40 19.12 52 ER21a ExonRegion 0 32.22 3.05 20.15 13.77 10.03 15.20 38.12 59.89 29.80 129.08 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.08 2.14 0.00 180.69 56.42 30.54 53 E21_Da NovelBoundary 0 3.33 0.00 3.55 3.10 3.82 2.38 13.51 14.01 11.75 33.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.93 0.00 2.62 16.00 13.84 6.74 54 E21a_E22a KnownJunction 0 40.90 0.00 20.40 4.89 4.33 13.17 34.98 62.19 35.16 116.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.80 0.00 0.00 125.28 32.58 27.91 55 I21_AR1 ActiveIntronRegion 0 2.52 0.00 0.82 4.09 1.53 5.94 5.11 7.33 3.00 18.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.79 3.19 0.00 10.39 8.43 11.75 56 E22_Aa NovelBoundary 0 6.82 0.00 4.70 8.76 0.00 0.00 8.35 20.25 7.99 34.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.68 0.00 0.00 9.20 6.25 29.28 57 ER22a ExonRegion 0 31.65 0.66 24.17 10.75 9.55 15.04 35.10 69.28 40.45 135.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.98 3.19 0.00 175.62 43.40 35.89 58 E22a_E23a KnownJunction 0 33.86 0.00 34.12 17.71 11.21 40.43 34.14 73.97 47.31 143.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28.73 13.46 0.00 143.63 42.86 15.02 59 ER23a ExonRegion 0 32.10 1.38 41.00 15.89 13.11 20.68 28.29 87.42 43.00 138.01 0.00 0.00 0.00 0.00 0.00 0.00 0.07 17.12 2.62 1.16 169.34 49.54 21.21 60 E23_Da NovelBoundary 0 10.22 0.00 11.56 2.06 7.47 0.00 32.02 42.84 12.85 90.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10.32 0.00 0.00 45.53 15.12 18.52 61 E23a_E24a KnownJunction 0 24.89 0.00 36.34 16.35 26.83 28.51 27.87 78.37 35.88 103.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.88 0.00 0.00 172.98 79.79 43.62 62 I23 Intron 0 3.86 0.95 2.28 2.90 3.12 1.03 14.74 11.08 6.93 20.96 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.81 0.69 0.68 12.74 8.43 4.36 63 I23_AR1 ActiveIntronRegion 0 2.11 0.00 4.45 2.21 2.72 1.03 12.53 14.56 7.35 32.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.01 2.29 0.31 24.88 9.21 4.21 64 I23_AR2 ActiveIntronRegion 0 2.88 0.00 4.80 0.53 1.30 0.55 12.50 11.42 8.82 30.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.43 0.07 0.00 13.90 7.84 4.48 65 I23_SR1 SilentIntronRegion 0 5.20 0.00 1.89 2.02 1.94 1.38 7.52 9.97 5.75 32.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.80 0.00 0.00 15.13 7.67 3.45 66 I23_SR2 SilentIntronRegion 0 7.47 1.69 2.93 2.27 7.73 4.08 27.69 17.43 8.68 35.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.70 0.00 2.13 18.55 10.65 7.34 67 I23_AR3 ActiveIntronRegion 0 5.33 0.47 5.62 7.10 6.44 1.83 15.35 27.84 14.00 48.57 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.65 0.75 0.90 20.86 16.68 8.00 68 I23_AR4 ActiveIntronRegion 0 7.27 1.67 1.59 3.25 3.19 3.05 21.25 12.12 8.80 24.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.94 0.00 0.29 14.97 13.94 2.17 69 E24_Aa NovelBoundary 0 16.23 0.00 2.99 3.23 7.47 0.00 42.00 9.82 8.74 41.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.62 0.00 0.00 7.97 6.25 7.51 70 ER24a ExonRegion 0 90.95 4.12 49.94 29.83 40.06 29.43 76.51 96.83 35.89 106.42 0.00 0.00 0.00 0.00 0.00 0.00 0.10 11.62 1.31 1.66 126.49 71.07 38.49 71 IG30_AR1 ActiveIntergenicRegion 0 7.75 36.08 2.60 13.16 42.72 34.07 25.37 20.69 13.19 18.67 0.00 0.62 0.00 0.00 0.00 0.00 0.00 10.73 5.53 31.44 1.93 8.04 3.57