Order	SeqName	SeqType	IsAE	NBL01_MYCN	NBL05_MYCN	NBL09_MYCN	NBL10_MYCN	NBL02	NBL03	NBL04	NBL06	NBL07	NBL08	NBL11_Rel2	NBL11_Rem1	NBL11_Rel1	NBL12_Rel_Left	NBL12_Rel_Right	NBL13_Rel_Left	NBL13_Rel_Right	NBL14_MYCN_Met	NBL14_MYCN_Pri	NBL15_MYCN_Rel1	SKP01	SKP02	SKP03
1	CCDC99	Gene	0	60.89	97.54	69.14	47.48	84.70	57.74	125.25	63.32	45.60	95.75	150.79	253.55	84.88	224.51	120.23	146.13	160.96	155.69	59.49	101.92	31.88	72.65	68.49
2	446362	Transcript	0	27.41	40.58	26.61	17.08	50.17	32.20	83.95	28.14	28.47	49.99	91.34	152.15	30.03	118.96	41.16	96.04	131.56	106.66	19.48	66.28	22.80	30.37	67.44
3	274631	Transcript	0	14.67	31.18	0.00	1.33	13.50	11.30	31.75	0.00	0.00	0.00	31.48	41.56	19.32	21.01	29.54	44.26	59.47	6.59	15.06	30.42	17.30	34.29	27.15
4	265295	Transcript	0	24.62	52.03	44.83	38.40	69.00	42.27	107.04	41.92	39.59	72.20	144.22	249.82	59.27	222.46	83.70	146.87	174.91	136.25	61.73	93.18	33.59	47.95	69.57
5	ER1a	ExonRegion	0	1.43	0.00	0.00	0.00	0.66	1.41	1.79	0.00	0.00	0.00	0.65	0.00	0.00	0.00	1.87	0.00	0.00	0.00	2.21	1.34	0.00	1.38	0.00
6	E1_Ab	KnownBoundary	0	2.89	0.00	0.00	0.00	3.82	7.95	6.76	0.00	0.00	0.00	2.42	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.68	0.00	2.45	0.00
7	ER1b	ExonRegion	1	36.93	43.39	10.31	8.58	38.23	33.83	75.09	6.41	8.56	23.08	62.12	12.22	0.29	85.25	26.57	76.40	72.57	91.91	20.98	38.28	20.78	18.02	50.22
8	E1a_E2a	KnownJunction	0	12.97	2.76	4.46	6.33	22.50	0.00	10.55	8.34	11.28	7.63	28.06	28.66	6.66	14.77	14.09	15.30	13.56	16.21	9.13	18.28	11.37	2.33	3.93
9	ER2a	ExonRegion	0	14.87	14.87	39.03	36.27	45.46	30.54	45.86	35.87	34.70	73.31	132.81	116.13	64.60	170.84	72.48	121.58	163.52	177.01	42.41	107.24	33.79	51.52	66.95
10	E2_Da	NovelBoundary	0	11.34	12.10	0.00	5.29	15.53	5.45	10.25	20.45	3.59	12.92	16.48	32.71	6.82	7.00	0.00	0.00	11.59	20.10	0.00	19.62	5.37	4.84	8.37
11	E2a_E3a	KnownJunction	1	17.93	28.88	41.87	29.80	147.11	85.58	136.77	31.71	24.83	78.79	155.14	180.06	67.04	152.81	101.37	55.80	152.88	100.98	35.86	81.49	25.70	30.62	23.56
12	I2	Intron	0	6.46	7.38	2.50	4.04	7.81	6.08	19.03	9.91	5.45	7.41	8.89	19.56	15.91	14.47	6.82	9.47	9.93	9.73	4.09	17.41	2.63	15.39	10.78
13	I2_AR1	ActiveIntronRegion	0	6.24	4.71	3.46	5.99	5.64	6.18	17.86	14.11	8.15	9.36	13.04	24.64	24.48	17.29	7.70	17.54	11.83	25.40	10.74	25.11	6.04	21.52	16.71
14	I2_AR2	ActiveIntronRegion	0	10.41	5.26	2.60	3.65	7.61	6.94	23.94	10.66	4.01	7.07	11.41	20.13	12.56	15.92	6.58	8.72	13.03	8.52	3.71	19.09	3.42	16.22	12.70
15	E3_Aa	NovelBoundary	0	6.00	5.59	1.66	0.00	14.86	5.34	22.52	30.64	8.01	2.61	12.74	23.86	6.17	16.89	4.45	4.10	9.07	7.21	4.52	33.56	8.71	21.55	0.00
16	ER3a	ExonRegion	0	48.83	87.15	56.32	40.69	77.90	63.87	147.71	56.79	46.20	96.93	178.34	277.93	104.55	194.95	80.55	108.87	209.80	117.68	38.80	113.50	25.03	69.77	46.88
17	E3_Da	NovelBoundary	0	24.37	24.07	27.14	31.56	57.39	35.15	66.99	28.14	33.82	45.85	65.60	93.78	37.98	117.37	33.62	68.87	103.69	73.17	31.44	65.77	12.48	39.74	21.94
18	E3a_E5b	KnownJunction	0	27.41	40.58	26.61	17.08	50.17	32.20	83.95	28.14	28.47	49.99	91.34	152.15	30.03	118.96	41.16	96.04	131.56	106.66	19.48	66.28	22.80	30.37	67.44
19	E3_Db	NovelBoundary	0	0.00	25.06	3.67	1.47	0.00	5.45	16.38	10.68	14.15	8.95	0.00	6.30	0.00	0.00	0.00	0.00	4.77	5.76	0.00	17.39	0.00	0.00	0.00
20	E3b_E4a	KnownJunction	0	98.98	49.07	53.34	51.51	68.17	93.64	134.87	51.10	34.98	90.98	229.90	248.33	92.69	348.76	131.53	196.27	259.65	152.30	102.03	138.51	33.98	90.99	75.12
21	ER3b	ExonRegion	0	72.67	46.43	47.07	47.25	74.92	71.82	111.87	43.50	36.64	85.73	207.46	245.34	95.36	307.77	104.45	170.15	240.42	144.74	76.71	125.35	31.77	82.82	64.61
22	E4_Aa	NovelBoundary	0	6.37	13.48	1.54	3.26	11.21	12.95	7.15	6.24	15.25	10.50	0.00	5.85	0.00	2.47	0.00	0.00	0.00	4.68	3.67	9.52	0.00	3.12	3.76
23	ER4a	ExonRegion	0	46.92	57.87	62.73	58.00	55.12	58.27	104.65	69.89	61.93	102.26	222.97	364.01	129.81	322.81	103.36	198.87	256.84	233.67	71.73	137.13	51.67	85.49	89.88
24	E4a_E5a	KnownJunction	0	35.12	78.67	71.08	61.83	106.11	60.14	166.98	61.45	59.29	106.96	227.00	357.12	81.49	336.63	130.66	226.18	270.31	189.32	97.04	146.82	52.20	75.62	104.66
25	E4a_E7b	KnownJunction	0	14.67	31.18	0.00	1.33	13.50	11.30	31.75	0.00	0.00	0.00	31.48	41.56	19.32	21.01	29.54	44.26	59.47	6.59	15.06	30.42	17.30	34.29	27.15
26	E5_Ab	NovelBoundary	0	55.57	99.32	55.35	50.28	114.35	85.24	180.63	65.47	64.12	121.93	188.21	383.98	97.40	319.74	132.27	227.29	254.98	210.71	71.63	148.16	51.34	71.46	121.81
27	ER5a	ExonRegion	0	37.34	77.42	62.58	51.55	99.10	66.67	154.15	61.42	58.67	108.87	205.65	373.57	91.62	322.62	116.57	214.42	254.40	219.42	84.98	131.31	48.56	68.24	104.04
28	ER5b	ExonRegion	0	57.23	77.83	69.53	52.28	76.17	88.20	137.43	47.04	56.96	112.74	178.67	371.27	127.94	357.17	114.00	228.90	247.43	273.16	64.41	147.45	41.42	71.35	128.68
29	E5a_E6a	KnownJunction	0	50.97	71.96	73.56	70.45	61.97	122.37	167.33	62.84	52.60	157.76	224.00	353.67	140.09	359.47	125.84	227.29	261.34	300.12	72.47	123.87	46.46	80.71	103.72
30	ER6a	ExonRegion	0	39.34	67.95	66.47	42.44	49.33	71.11	119.87	51.38	54.56	110.11	168.67	299.13	115.97	303.45	100.78	207.00	245.67	250.44	66.76	139.93	54.22	57.48	78.96
31	E6a_E7a	KnownJunction	0	66.53	57.95	77.58	43.38	78.52	83.36	141.45	43.37	49.85	78.73	169.94	331.76	62.33	362.18	127.94	174.74	240.30	240.26	41.51	148.42	33.98	42.37	114.13
32	ER7a	ExonRegion	0	48.16	80.76	80.42	49.23	68.64	56.10	148.61	50.58	47.79	92.88	179.13	291.22	93.51	346.77	118.66	186.94	222.84	260.16	59.29	129.79	47.40	73.82	109.43
33	E7_Ab	KnownBoundary	0	71.27	86.37	87.99	55.34	70.20	55.54	167.16	71.06	56.83	108.58	185.26	248.78	106.49	280.77	127.45	186.11	215.24	270.77	55.25	107.06	67.46	100.67	101.50
34	ER7b	ExonRegion	0	78.69	105.12	82.16	51.70	129.13	53.39	165.07	65.96	58.47	90.31	212.06	329.95	103.94	341.75	144.64	201.63	208.28	239.40	102.24	130.27	54.88	80.55	102.88
35	E7a_E8a	KnownJunction	0	83.42	83.21	71.02	61.16	181.32	68.26	200.19	61.20	61.20	72.39	203.16	296.80	110.06	343.34	194.82	259.59	189.43	167.55	103.81	118.95	40.65	107.65	70.77
36	I7_AR1	ActiveIntronRegion	0	2.12	4.75	0.00	1.89	0.00	0.00	8.39	7.49	6.93	3.95	5.37	16.12	0.00	4.51	0.16	10.90	13.57	11.60	1.24	28.72	0.00	4.17	8.81
37	ER8a	ExonRegion	0	55.76	92.30	64.43	39.45	84.35	79.98	164.64	63.57	53.31	94.83	175.56	320.81	95.00	271.59	129.59	158.22	185.74	160.75	67.07	125.43	29.40	97.19	67.13
38	E8a_E9a	KnownJunction	0	85.94	98.67	69.66	52.07	87.86	84.55	165.52	99.07	51.04	113.04	141.35	421.79	91.07	295.49	216.70	150.22	177.84	94.31	47.62	105.78	33.61	82.91	101.67
39	ER9a	ExonRegion	0	80.00	104.10	59.42	44.03	108.75	70.34	160.30	78.01	61.45	106.87	157.03	354.56	100.16	252.61	129.89	165.84	150.35	125.95	67.38	127.82	26.17	93.22	67.77
40	E9a_E10a	KnownJunction	0	50.08	193.52	94.50	43.62	123.85	68.77	250.93	70.65	57.41	90.31	153.46	367.77	155.35	183.30	137.96	93.65	165.68	118.23	86.03	112.56	9.27	101.10	47.46
41	ER10a	ExonRegion	0	75.92	138.55	96.93	52.60	147.27	84.58	203.43	78.41	61.14	106.44	196.00	410.42	130.37	277.64	142.50	201.61	193.51	203.47	82.51	145.03	42.68	95.10	86.87
42	E10a_E11a	KnownJunction	0	95.05	74.00	128.68	64.39	146.94	100.79	161.81	78.78	62.79	143.93	207.53	441.14	170.93	317.62	171.83	195.16	223.00	282.92	98.92	153.40	51.34	97.18	86.30
43	ER11a	ExonRegion	0	85.60	118.28	108.25	60.09	116.86	84.70	170.38	84.40	58.54	123.30	192.76	299.45	88.16	311.67	166.51	214.14	202.38	271.12	101.75	146.83	47.59	71.63	94.04
44	E11_Da	NovelBoundary	0	7.26	76.57	45.00	28.33	21.05	17.89	42.13	43.91	34.95	28.80	12.74	6.30	20.45	73.99	25.84	10.94	35.44	154.70	44.42	63.47	2.59	5.33	10.84
45	E11a_E12a	KnownJunction	0	70.75	41.24	71.08	28.93	52.12	35.60	96.58	37.42	29.34	88.32	173.94	113.59	57.14	197.31	213.98	165.34	165.97	58.53	32.57	43.53	30.02	72.68	87.16
46	I11	Intron	0	10.39	62.28	33.60	37.23	45.44	33.18	61.00	41.02	29.62	36.18	11.07	24.48	12.36	24.14	15.83	9.51	19.38	39.24	11.11	54.25	1.17	4.76	3.32
47	I11_AR1	ActiveIntronRegion	0	10.40	62.33	33.64	37.27	45.48	33.21	61.05	41.06	29.65	36.21	11.08	24.51	12.38	24.16	15.84	9.52	19.40	39.27	11.12	54.30	1.17	4.77	3.32
48	E12_Aa	NovelBoundary	0	13.11	42.76	29.89	22.97	35.57	40.83	27.69	45.55	14.61	48.46	4.21	0.00	7.30	15.60	15.08	8.37	21.32	17.16	26.17	23.39	0.00	3.00	0.00
49	ER12a	ExonRegion	0	77.20	144.32	78.94	57.79	92.49	41.39	108.51	80.32	39.03	105.78	111.76	209.76	71.80	149.95	153.00	93.19	90.16	54.75	45.04	54.51	16.03	84.87	43.81
50	ER12b	ExonRegion	0	1.41	0.00	0.82	1.82	1.78	0.00	0.00	2.88	0.82	0.76	0.00	18.76	4.69	8.12	3.87	0.00	0.00	0.00	3.19	1.42	0.00	0.00	0.00