Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PCDHGA12 Gene 0 2.36 3.89 6.78 3.05 1.52 1.81 2.62 3.84 8.30 7.07 0.23 1.42 0.85 0.44 1.51 0.70 0.21 30.99 3.01 5.10 100.72 67.13 42.23 2 252085 Transcript 0 1.08 1.19 7.49 1.02 0.40 0.63 1.74 2.41 4.34 5.95 0.06 0.38 0.22 0.26 0.65 0.19 0.06 24.54 1.34 4.58 95.14 56.48 33.53 3 ER1a ExonRegion 0 4.33 7.07 12.07 5.65 2.82 3.24 4.79 6.94 15.13 12.69 0.42 2.63 1.57 0.79 2.71 1.30 0.39 55.58 5.56 9.17 180.37 119.64 74.86 4 E1_Da NovelBoundary 0 0.00 0.00 9.96 7.42 0.00 2.27 6.49 1.68 10.36 4.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.05 13.74 5.50 17.54 0.00 11.35 5 E1a_E2a KnownJunction 0 2.89 0.00 23.83 1.30 0.00 0.00 6.27 4.07 8.19 17.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 60.85 3.48 13.87 273.86 159.21 82.89 6 Ix_AR2 ActiveIntronRegion 0 5.34 12.61 5.80 9.34 6.01 2.12 15.93 10.28 19.70 6.98 0.00 0.34 0.64 0.29 0.53 1.83 0.00 28.70 1.97 5.28 16.25 2.91 19.67 7 Ix_SR2 SilentIntronRegion 0 1.60 4.66 5.71 11.33 3.05 1.07 9.78 13.09 19.19 8.78 0.00 0.67 0.00 0.54 1.69 0.44 0.10 28.39 3.09 5.06 10.40 3.16 9.30 8 Ix_AR3 ActiveIntronRegion 0 0.32 4.86 4.93 4.26 2.52 2.12 4.97 4.49 15.42 6.69 0.47 0.08 0.31 0.26 1.22 0.00 0.47 21.73 2.22 4.59 9.97 2.05 7.27 9 Ix_SR3 SilentIntronRegion 0 2.13 16.56 10.39 8.41 7.41 2.28 14.11 6.25 22.51 7.22 0.00 4.30 3.10 0.30 0.00 0.00 0.00 16.13 3.52 4.26 8.48 0.72 9.55 10 Ix_SR5 SilentIntronRegion 0 2.39 8.63 5.03 7.69 6.57 2.68 8.73 11.07 19.92 10.62 0.00 0.58 0.00 0.04 0.17 0.44 0.27 11.15 1.96 4.07 4.99 3.45 8.91 11 Ix_AR6 ActiveIntronRegion 0 0.00 7.08 0.63 4.48 10.19 1.83 4.31 5.02 13.87 8.51 0.00 0.00 0.00 0.00 0.00 4.51 0.00 21.58 3.19 2.88 16.21 3.83 34.58 12 Ix_AR7 ActiveIntronRegion 0 2.27 6.61 1.74 3.08 0.99 0.98 2.83 2.87 7.12 4.20 0.00 0.00 0.00 0.00 0.00 0.66 0.00 11.94 3.69 9.99 24.33 10.99 23.55 13 Ix Intron 0 4.05 23.79 6.14 12.58 5.52 2.80 10.82 7.68 20.12 8.89 0.00 1.36 2.70 0.00 1.44 0.68 0.00 23.68 3.90 15.29 12.29 7.01 18.20 14 Ix_AR1 ActiveIntronRegion 0 2.89 15.39 3.40 13.08 3.61 1.92 10.10 8.02 20.99 7.49 0.00 1.43 0.96 0.00 1.81 1.83 0.00 42.51 5.45 15.30 19.51 8.09 29.09 15 Ix_SR1 SilentIntronRegion 0 4.74 28.83 7.79 12.31 6.67 3.34 11.28 7.50 19.66 9.73 0.00 1.33 3.74 0.00 1.21 0.00 0.00 12.57 2.99 15.33 8.04 6.39 11.78 16 Ix Intron 0 4.05 18.42 8.53 11.04 8.51 6.35 9.27 6.58 20.19 5.99 0.08 0.53 1.03 0.24 0.70 0.42 0.00 22.42 5.90 13.36 10.73 4.82 12.83 17 Ix_SR1 SilentIntronRegion 0 4.17 17.84 8.49 11.69 8.50 4.83 9.32 6.64 20.33 5.67 0.08 0.57 1.11 0.26 0.76 0.45 0.00 22.16 6.14 10.73 10.38 5.15 12.74 18 Ix_AR1 ActiveIntronRegion 0 2.45 26.30 9.13 2.35 8.71 26.78 8.79 5.97 18.53 10.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26.14 2.77 48.73 15.53 0.51 14.08 19 Ix Intron 0 1.56 6.93 3.48 5.56 7.06 7.17 6.28 7.23 23.18 8.28 0.13 0.60 0.60 0.31 0.63 0.79 0.22 44.98 6.28 19.47 20.60 8.70 22.46 20 Ix_AR1 ActiveIntronRegion 0 1.89 4.13 1.67 2.07 6.73 7.00 4.38 5.46 23.52 5.82 0.71 0.00 0.00 0.40 1.29 0.00 0.00 41.60 7.21 16.45 17.46 3.80 23.37 21 Ix_AR2 ActiveIntronRegion 0 0.00 8.39 2.45 4.43 10.70 11.00 8.94 5.19 21.15 8.46 1.93 0.00 0.00 0.00 0.00 0.00 0.00 40.65 12.74 24.20 17.63 4.17 14.68 22 Ix_SR1 SilentIntronRegion 0 1.56 7.94 4.07 6.41 7.02 7.04 7.01 7.62 24.23 9.19 0.05 0.77 0.61 0.23 0.62 1.03 0.29 48.89 6.66 20.92 18.82 7.69 18.79 23 Ix_SR3 SilentIntronRegion 0 2.99 18.37 5.81 9.80 9.45 3.64 8.31 12.98 23.99 13.87 0.00 0.00 0.92 0.00 0.79 0.95 0.00 51.58 7.42 12.91 25.38 11.63 20.87 24 ER2a ExonRegion 0 0.29 0.00 11.84 0.18 0.00 0.00 1.10 2.49 5.92 8.67 0.00 0.00 0.00 0.69 0.00 0.00 0.00 42.69 0.32 8.33 146.83 69.53 55.10 25 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 26 ER3a ExonRegion 0 0.00 1.17 4.63 0.00 0.00 1.05 0.00 3.36 1.05 3.21 0.00 0.00 0.00 0.31 1.79 0.00 0.00 12.19 0.00 0.62 64.38 45.21 20.16 27 E3a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 Ix_AR4 ActiveIntronRegion 0 6.35 8.13 7.35 8.18 13.38 20.17 8.61 8.64 13.79 8.03 0.00 0.00 0.00 0.00 0.00 2.97 0.00 10.16 0.00 5.32 19.83 7.99 3.92 29 ER4a ExonRegion 0 0.05 0.10 0.07 0.00 0.00 0.09 0.03 0.01 0.07 0.10 0.00 0.00 0.00 0.00 0.03 0.00 0.00 0.47 0.00 0.05 0.55 1.80 1.67