Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PCDHB13 Gene 0 2.98 32.89 11.40 41.50 24.63 20.35 10.79 21.76 63.42 143.14 0.14 0.13 0.00 0.13 0.11 0.00 0.24 64.58 12.57 41.98 3.14 15.48 11.97 2 341948 Transcript 0 4.82 36.30 12.55 63.21 41.37 29.55 8.70 34.12 91.88 162.52 0.00 0.00 0.00 0.27 0.68 0.00 1.54 54.38 21.35 40.87 3.00 27.26 17.27 3 419217 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4 430318 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 IG13 Intergenic 0 2.01 29.21 3.61 29.49 27.43 21.77 8.96 10.50 42.68 82.78 0.15 0.00 0.00 0.00 0.00 0.00 0.00 16.38 3.40 37.38 0.09 3.71 3.14 6 IG13_AR1 ActiveIntergenicRegion 0 2.31 38.34 2.53 25.99 28.15 16.92 6.04 8.18 32.14 66.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.58 2.53 19.84 0.00 4.34 1.17 7 IG13_SR1 SilentIntergenicRegion 0 2.02 22.56 3.24 31.82 26.33 27.26 9.38 9.84 48.26 93.47 0.37 0.00 0.00 0.00 0.00 0.00 0.00 15.93 3.02 45.70 0.00 3.02 4.06 8 IG13_AR2 ActiveIntergenicRegion 0 1.37 24.78 6.83 32.20 28.69 20.14 14.44 17.13 53.45 95.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43.22 6.21 57.10 0.47 3.94 5.38 9 ER1a ExonRegion 0 1.04 11.63 4.11 16.26 12.49 8.17 4.20 7.00 30.54 70.78 0.00 0.00 0.00 0.00 0.00 0.00 0.00 41.28 3.97 20.09 5.09 3.24 2.31 10 E1_Ab KnownBoundary 0 3.78 27.56 7.30 25.01 52.46 15.79 30.87 74.39 64.26 290.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 152.38 72.10 45.32 11.98 16.59 20.40 11 ER1b ExonRegion 0 3.05 41.67 13.30 47.17 29.74 24.68 14.97 25.31 74.61 174.22 0.00 0.25 0.00 0.09 0.00 0.00 0.00 80.68 14.86 53.53 3.51 17.68 14.63 12 E1_Da KnownBoundary 0 97.28 254.30 240.12 283.81 196.52 360.47 406.12 402.36 568.74 1382.10 2.37 6.30 0.00 0.00 0.00 0.00 0.00 1089.73 293.75 243.72 18.78 106.12 122.84 13 E1a_E1c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 ER1c ExonRegion 0 2.65 10.29 8.20 23.07 9.64 18.81 7.64 11.35 34.70 80.94 0.00 0.00 0.00 0.36 0.00 0.00 0.00 67.96 9.93 35.84 6.00 6.30 7.53 15 E1_Ac KnownBoundary 0 30.89 138.26 198.07 263.80 80.48 105.17 191.67 322.51 517.96 1127.26 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1155.02 136.76 208.95 22.92 58.05 36.54 16 ER1d ExonRegion 0 2.50 20.70 7.79 26.22 11.34 9.75 4.32 12.32 36.08 89.96 0.54 0.00 0.00 0.16 0.20 0.00 0.46 40.62 6.69 23.46 1.84 9.42 7.49 17 E1_Db KnownBoundary 0 6.96 50.19 18.66 51.48 74.70 26.58 42.04 23.74 74.74 141.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22.38 0.00 27.16 3.09 39.19 4.35 18 E1b_E1d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 E1_Dc KnownBoundary 0 2.96 25.59 10.20 75.68 94.82 69.62 4.33 48.71 119.82 185.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 65.45 9.60 24.16 0.00 9.00 11.52 20 ER1e ExonRegion 0 5.87 42.61 20.39 76.63 91.22 53.01 24.49 45.65 125.42 215.77 0.00 0.00 0.00 0.00 0.00 0.00 0.00 55.60 6.52 30.37 0.50 28.70 9.61 21 ER1f ExonRegion 0 11.51 65.21 22.44 116.55 81.48 65.67 12.80 60.33 167.05 264.97 0.00 0.00 0.00 0.80 2.03 0.00 4.61 114.64 49.96 64.79 1.39 57.23 47.79 22 E1_Ad KnownBoundary 0 3.63 33.42 28.86 85.00 34.38 18.80 4.28 36.88 115.39 158.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 33.37 23.25 46.28 0.00 37.35 7.77 23 ER1g ExonRegion 0 3.29 47.11 26.31 102.97 37.76 21.04 6.14 54.88 151.61 238.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 24.48 22.30 40.66 0.00 36.81 10.93 24 E1_Dd KnownBoundary 0 3.78 54.20 17.36 102.85 47.96 29.98 10.29 56.56 134.23 252.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.18 22.02 45.32 0.00 34.54 10.76 25 ER1h ExonRegion 0 1.93 32.06 11.11 56.83 30.15 14.81 9.09 35.04 78.05 151.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7.22 10.13 37.72 2.53 21.33 1.72 26 IG14 Intergenic 0 3.76 23.90 5.01 18.83 21.42 13.55 10.50 12.14 65.25 91.95 0.07 0.06 0.00 0.09 0.12 0.00 0.00 13.97 6.44 20.14 0.62 10.59 5.53 27 IG14_AR1 ActiveIntergenicRegion 0 4.03 19.48 3.49 19.79 19.84 15.02 10.51 10.00 59.41 72.24 0.00 0.00 0.00 0.13 0.27 0.00 0.00 13.47 8.86 24.33 0.86 12.58 6.32 28 IG14_SR1 SilentIntergenicRegion 0 3.13 24.69 4.78 15.44 17.40 11.92 9.46 12.43 73.21 105.82 0.18 0.00 0.00 0.10 0.00 0.00 0.00 16.29 5.23 18.66 0.53 9.21 5.41 29 IG14_SR2 SilentIntergenicRegion 0 5.70 31.50 10.21 27.71 40.35 8.50 10.81 20.09 72.61 138.17 0.00 0.30 0.00 0.00 0.00 0.00 0.00 9.10 1.88 9.75 0.00 10.24 3.92 30 IG14_AR3 ActiveIntergenicRegion 0 4.24 39.30 10.18 24.25 34.70 17.74 15.48 17.63 67.51 115.10 0.00 0.43 0.00 0.00 0.00 0.00 0.00 12.65 3.77 15.97 0.37 8.56 4.20