Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CSF1R Gene 0 212.17 2.38 10.37 35.77 81.18 45.38 32.75 50.33 80.78 32.83 0.42 0.78 2.73 0.36 1.18 0.30 0.76 1.46 0.89 1.27 1.52 9.84 7.26 2 286301 Transcript 0 7.17 0.00 0.55 0.00 1.30 0.28 0.53 1.81 2.98 0.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.30 5.82 8.29 3 394307 Transcript 0 11.51 0.00 0.38 0.60 4.68 0.92 0.83 1.40 0.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.39 0.55 4 IG39 Intergenic 0 1.33 0.00 0.46 1.02 1.34 0.23 0.17 0.00 0.69 1.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.20 0.00 4.14 10.70 14.35 5 IG39_AR3 ActiveIntergenicRegion 0 2.70 0.00 0.00 0.00 3.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.03 0.00 0.00 14.61 16.85 6 IG39_AR2 ActiveIntergenicRegion 0 0.00 0.00 0.00 0.96 0.00 0.00 0.00 0.00 0.96 1.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.64 0.00 0.59 3.81 10.24 7 IG39_AR1 ActiveIntergenicRegion 0 1.14 0.00 0.66 1.32 0.96 0.33 0.24 0.00 0.85 2.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.74 0.00 5.86 10.69 14.34 8 ER1a ExonRegion 0 0.96 0.00 1.66 0.00 1.22 0.84 1.21 0.00 0.84 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.01 14.94 20.77 9 E1_Da NovelBoundary 0 0.00 0.00 4.91 0.00 0.00 0.00 0.00 0.00 0.00 5.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.09 27.86 31.58 10 E1a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.51 4.10 11 I1_AR1 ActiveIntronRegion 0 0.00 0.00 0.61 2.04 0.00 0.00 0.00 0.00 0.00 5.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.06 0.00 8.33 2.94 12 I1_SR1 SilentIntronRegion 0 2.88 0.59 5.57 3.85 2.54 2.12 1.94 2.00 1.44 5.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.36 1.11 0.44 5.59 43.22 33.10 13 I1_AR2 ActiveIntronRegion 0 2.64 0.00 4.04 4.09 1.28 1.93 1.33 3.00 1.59 2.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.35 0.17 1.02 1.78 39.79 12.62 14 ER2a ExonRegion 0 11.51 0.00 0.38 0.60 4.68 0.92 0.83 1.40 0.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.39 0.55 15 ER2b ExonRegion 0 42.98 0.00 2.71 6.37 22.36 20.04 21.50 8.08 24.40 8.97 0.00 0.00 0.00 0.03 0.92 0.00 0.00 0.00 0.71 0.48 0.99 10.96 4.11 16 E2a_E3a KnownJunction 0 7.04 0.00 1.60 7.23 0.00 0.00 1.94 11.01 38.11 15.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25.41 3.33 17 ER3a ExonRegion 0 18.14 0.00 2.37 9.98 20.73 19.34 17.89 21.50 55.01 20.00 0.00 0.00 0.76 0.50 1.18 0.00 0.00 0.91 0.00 1.24 0.00 7.83 2.86 18 E3a_E4a KnownJunction 0 46.01 0.00 2.90 11.15 3.90 38.27 19.43 4.97 42.45 22.62 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.51 3.67 19 ER4a ExonRegion 0 48.81 0.00 3.26 9.60 18.96 18.71 13.49 24.32 64.10 26.07 0.00 0.00 2.02 0.00 1.25 0.00 0.00 0.91 0.00 0.78 1.18 8.91 2.75 20 E4a_E5a KnownJunction 0 88.31 0.00 11.00 23.07 3.31 10.33 26.50 44.89 92.42 30.14 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.74 0.00 0.00 0.00 8.02 0.00 21 ER5a ExonRegion 0 56.02 0.76 6.25 26.95 24.51 29.64 12.87 39.83 96.15 35.17 0.00 0.00 1.75 0.49 0.19 0.00 0.00 0.15 0.00 0.00 2.46 14.42 2.19 22 E5a_E6a KnownJunction 0 72.75 0.00 5.94 35.23 94.48 57.52 39.83 44.69 110.36 47.41 0.00 0.00 0.00 0.00 4.45 0.00 0.00 0.00 0.00 0.00 0.00 22.84 0.00 23 ER6a ExonRegion 0 79.34 0.65 2.93 23.83 73.37 40.70 32.26 37.70 88.08 35.60 0.00 0.00 2.40 0.04 0.49 0.00 0.00 0.00 1.02 0.00 1.03 15.13 4.68 24 E6a_E7a KnownJunction 0 30.52 0.00 1.83 32.53 79.12 30.95 28.35 39.92 89.52 28.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.15 14.39 0.00 25 ER7a ExonRegion 0 53.48 0.54 1.70 20.20 48.88 44.72 26.68 39.95 80.46 32.12 0.64 0.00 2.16 0.68 1.62 0.79 0.00 0.00 0.00 0.00 0.31 15.34 5.20 26 E7_Da NovelBoundary 0 23.63 0.00 0.00 0.00 7.30 0.00 18.77 6.78 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 27 E7a_E8a KnownJunction 0 125.87 0.00 1.74 22.71 102.46 101.13 55.29 35.45 74.54 31.29 5.05 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19.47 3.84 28 ER8a ExonRegion 0 110.39 0.89 0.70 23.85 50.65 55.20 36.83 33.45 60.48 31.98 0.95 0.00 7.28 0.50 0.90 0.61 0.00 0.00 0.00 0.00 0.00 12.79 1.67 29 E8a_E9a KnownJunction 0 78.98 0.00 1.36 15.72 34.72 23.34 30.43 39.43 68.75 36.05 2.63 0.00 0.00 2.18 0.00 4.36 0.00 0.00 0.00 0.00 0.00 5.39 0.00 30 ER9a ExonRegion 0 68.11 0.00 3.18 16.21 39.56 25.35 22.51 27.47 61.14 29.95 1.33 0.00 2.71 0.08 0.86 0.66 0.00 0.00 0.00 0.00 0.00 7.99 0.00 31 E9a_E10a KnownJunction 0 66.23 0.00 0.00 29.20 35.74 37.54 30.78 36.06 72.51 27.53 0.00 0.00 6.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.12 0.00 32 ER10a ExonRegion 0 45.33 0.00 3.60 21.80 40.49 39.58 24.18 32.49 70.26 31.51 0.00 0.00 3.93 0.03 0.77 0.00 0.00 0.00 0.00 0.57 0.59 6.16 0.78 33 E10a_E11a KnownJunction 0 84.90 2.76 5.09 18.55 28.27 58.83 24.60 37.21 72.25 37.61 0.00 0.00 6.66 0.00 0.00 0.00 0.00 0.00 0.00 2.88 0.00 3.12 0.00 34 ER11a ExonRegion 0 34.85 0.93 6.79 25.32 41.73 37.39 21.78 35.84 70.91 32.31 0.85 0.00 4.57 0.99 0.00 0.00 0.00 0.00 0.00 0.00 0.04 7.09 1.77 35 E11a_E12a KnownJunction 0 84.09 0.00 3.25 26.44 47.88 45.71 24.47 46.04 75.29 33.04 0.00 0.00 6.66 2.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.76 7.85 36 ER12a ExonRegion 0 114.19 4.07 6.45 25.88 66.24 56.88 36.46 42.00 81.05 37.39 1.14 0.00 7.90 1.00 2.47 0.00 0.00 0.04 0.00 0.00 0.85 5.38 6.34 37 E12a_E13a KnownJunction 0 151.95 0.00 4.14 20.28 62.14 52.41 25.39 51.67 64.96 27.08 2.68 0.00 19.64 2.83 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.17 3.76 38 ER13a ExonRegion 0 65.39 2.61 11.41 20.29 44.29 46.54 17.85 37.73 71.72 23.54 0.50 1.73 1.25 1.08 1.99 0.00 0.00 1.28 0.00 1.03 1.07 6.09 3.50 39 E13a_E14a KnownJunction 0 103.28 3.16 4.76 19.84 103.06 102.27 31.44 33.31 98.90 26.65 0.00 0.00 6.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.18 3.50 40 ER14a ExonRegion 0 70.44 0.31 6.54 27.07 68.65 56.34 29.13 37.03 69.98 29.63 1.29 1.17 2.62 0.00 2.98 0.00 0.00 0.00 1.46 0.88 0.00 9.18 2.43 41 E14a_E15a KnownJunction 0 74.61 0.00 7.95 20.88 99.32 43.33 50.65 38.65 81.45 33.15 2.53 12.60 6.82 0.00 10.75 0.00 0.00 0.00 0.00 0.00 0.00 5.88 0.00 42 ER15a ExonRegion 0 83.14 1.91 6.22 17.67 58.93 50.66 33.90 41.84 64.95 27.45 0.33 1.43 0.63 0.00 1.44 0.00 0.00 0.00 1.00 1.40 0.73 7.69 10.99 43 E15a_E16a KnownJunction 0 159.36 0.00 4.46 29.93 66.13 50.54 53.30 48.02 79.57 30.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13.17 0.00 44 ER16a ExonRegion 0 145.85 0.00 14.26 22.76 70.62 48.36 29.50 47.81 74.09 30.36 1.39 0.00 3.27 0.00 1.17 0.00 0.00 0.00 1.83 2.44 1.88 8.01 9.07 45 E16a_E17a KnownJunction 0 178.92 0.00 19.75 27.20 101.02 58.32 26.28 35.65 68.66 28.61 5.26 0.00 6.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.15 5.02 12.12 46 ER17a ExonRegion 0 130.66 2.12 12.50 37.12 74.51 54.96 31.10 55.65 66.09 37.53 0.75 1.86 8.28 0.00 3.26 0.00 0.00 0.02 0.00 1.11 2.81 11.80 13.63 47 E17a_E18a KnownJunction 0 164.70 0.00 10.97 42.88 90.15 78.53 45.31 57.05 76.94 33.09 0.00 0.00 6.49 0.00 4.45 0.00 0.00 0.00 0.00 0.00 0.00 2.57 14.77 48 ER18a ExonRegion 0 139.41 3.37 11.08 55.37 124.85 75.08 48.76 77.04 102.73 48.64 2.40 2.92 2.90 0.55 1.51 0.00 4.11 2.27 0.00 1.76 0.91 5.08 18.77 49 E18a_E19a KnownJunction 0 156.69 0.00 2.87 55.50 94.57 74.56 64.17 69.33 88.08 39.19 0.00 0.00 6.82 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.63 6.57 50 ER19a ExonRegion 0 143.70 1.85 11.74 58.07 71.55 54.96 43.93 76.81 116.02 53.56 0.00 0.04 1.05 1.22 2.12 1.35 0.00 2.10 0.00 0.97 1.77 6.23 10.28 51 E19a_E20a KnownJunction 0 246.86 0.00 14.34 46.61 91.43 55.25 38.55 79.11 129.63 48.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.66 3.12 11.95 52 E20_Aa NovelBoundary 0 37.41 5.79 4.70 19.68 3.65 11.53 10.55 20.62 12.36 20.90 0.00 0.00 0.00 0.00 0.00 0.00 4.68 14.14 0.00 0.00 2.90 8.82 8.37 53 ER20a ExonRegion 0 256.06 2.83 12.22 63.50 140.40 75.77 42.54 76.29 109.07 51.99 0.00 1.82 3.10 0.00 0.15 0.00 0.00 2.09 3.25 0.00 1.30 3.19 14.07 54 E20_Da NovelBoundary 0 48.01 0.00 9.93 13.55 36.42 4.88 2.12 37.87 14.09 18.59 0.00 0.00 0.00 0.00 4.45 0.00 0.00 1.70 9.22 11.89 0.00 2.69 6.91 55 E20a_E21a KnownJunction 0 376.44 2.96 6.30 75.88 191.60 103.35 66.02 92.42 114.21 61.54 0.00 0.00 12.99 0.00 0.00 0.00 0.00 2.45 0.00 0.00 5.07 5.39 14.17 56 E21_Aa NovelBoundary 0 128.39 6.25 5.03 14.28 20.54 0.00 6.67 19.63 1.48 10.91 0.00 0.00 0.00 0.00 0.00 4.19 3.55 7.38 0.00 0.00 0.00 5.14 4.35 57 ER21a ExonRegion 0 271.03 1.81 17.23 48.10 152.66 90.02 62.24 71.14 93.95 39.15 0.00 0.00 4.39 0.00 0.24 2.78 0.00 1.95 1.49 1.97 1.80 8.10 12.61 58 E21a_E22a KnownJunction 0 260.71 3.22 10.02 49.51 78.18 68.03 56.31 58.78 91.84 43.81 0.00 0.00 0.00 0.00 4.45 0.00 0.00 1.78 0.00 0.00 5.93 8.21 7.51 59 ER22a ExonRegion 0 646.53 7.09 25.40 76.98 176.15 61.52 52.32 93.83 119.07 43.35 0.32 2.00 2.97 0.49 1.21 0.49 2.72 4.60 2.45 3.28 3.42 11.74 10.83 60 ER22b ExonRegion 0 20.56 0.00 0.00 0.00 2.68 0.00 0.38 5.43 8.12 0.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.89 0.00 0.00