Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SPATA24 Gene 0 7.84 8.29 10.44 8.86 7.27 3.09 1.68 14.74 5.52 15.78 25.10 17.69 21.91 64.44 72.19 39.01 32.96 17.52 47.34 14.56 15.59 5.96 12.80 2 451821 Transcript 0 9.43 11.21 11.94 12.07 5.75 2.06 0.40 9.27 5.55 11.80 11.36 8.09 7.58 27.40 43.69 23.92 17.65 18.53 31.94 16.10 13.61 6.07 6.16 3 450845 Transcript 0 0.00 0.00 0.00 3.33 0.00 0.00 5.79 8.67 0.00 8.78 4.42 0.00 21.59 17.84 37.33 11.96 11.59 2.45 8.66 3.00 0.00 0.00 3.67 4 302091 Transcript 0 2.07 0.45 1.45 1.74 1.61 0.15 0.59 4.42 1.44 4.24 13.86 15.34 13.07 48.91 28.22 18.81 16.60 0.78 6.43 2.33 5.46 1.45 2.87 5 ER1a ExonRegion 0 16.27 18.91 10.05 3.84 15.11 9.05 2.34 13.96 7.38 14.78 11.81 1.53 11.82 26.36 57.90 35.79 23.50 24.19 76.36 16.89 15.50 7.41 19.76 6 E1a_E2a KnownJunction 0 6.00 6.45 8.13 5.36 7.56 5.79 0.00 8.79 2.46 10.91 8.90 0.00 25.00 16.54 47.10 0.00 0.00 2.57 3.95 9.33 5.81 0.00 0.00 7 ER2a ExonRegion 1 5.74 3.91 17.47 13.09 9.37 1.50 0.00 25.98 10.27 26.24 33.18 4.85 27.93 42.55 65.59 16.12 57.77 25.56 99.33 24.79 35.96 8.37 10.59 8 E2a_E3a KnownJunction 0 7.48 14.67 26.64 29.17 7.56 0.00 0.00 42.02 18.14 37.88 29.64 6.15 45.45 83.23 195.44 49.99 54.89 54.76 304.01 50.11 53.19 20.51 40.29 9 ER3a ExonRegion 1 2.94 9.44 21.45 20.90 7.15 2.93 1.62 24.09 10.56 27.24 31.47 10.54 28.61 58.43 123.65 60.69 23.84 45.53 112.90 25.30 24.19 11.94 29.21 10 E3a_E4a KnownJunction 0 3.11 15.59 25.49 19.11 29.29 0.00 10.78 27.52 12.62 34.20 17.16 11.70 38.96 60.80 64.53 42.89 40.49 21.39 67.39 23.91 34.29 0.00 16.39 11 ER4a ExonRegion 0 3.55 22.28 23.39 23.53 20.92 10.51 7.40 27.22 10.51 29.54 37.27 11.46 36.27 59.80 99.26 26.71 41.56 25.09 61.78 28.50 31.26 8.07 18.03 12 E4_Da KnownBoundary 0 11.19 23.68 16.32 26.60 14.86 4.66 0.00 10.88 14.84 27.91 25.27 0.00 0.00 26.31 60.82 16.06 17.67 20.48 57.70 26.85 29.59 9.37 24.24 13 E4a_E5a KnownJunction 0 7.56 12.76 2.39 3.76 0.00 0.00 0.00 10.10 0.00 8.81 19.11 12.45 18.67 37.14 37.09 15.12 3.93 9.08 16.38 3.00 0.00 2.69 3.50 14 ER4b ExonRegion 0 9.43 11.21 11.94 12.07 5.75 2.06 0.40 9.27 5.55 11.80 11.36 8.09 7.58 27.40 43.69 23.92 17.65 18.53 31.94 16.10 13.61 6.07 6.16 15 E4_Db NovelBoundary 0 6.82 6.31 7.45 4.36 4.33 2.90 4.37 7.56 6.13 10.50 7.48 7.65 12.50 11.65 23.73 8.72 9.07 9.24 22.31 21.28 0.00 2.94 19.12 16 I4 Intron 0 9.11 6.80 8.30 7.29 8.73 2.41 2.83 9.39 7.26 10.49 11.65 21.61 14.40 34.81 37.54 26.23 15.47 11.05 18.51 8.40 5.25 3.94 8.37 17 I4_AR2 ActiveIntronRegion 0 6.49 4.59 8.28 6.93 5.02 2.10 2.51 11.00 9.40 9.62 5.49 3.40 6.23 9.36 18.24 13.24 7.13 21.59 19.89 12.19 7.89 1.63 8.81 18 I4_SR2 SilentIntronRegion 0 11.89 8.60 10.10 8.15 10.05 2.51 3.13 9.66 7.90 12.36 13.01 30.19 20.89 38.14 45.62 26.86 16.36 10.54 17.71 7.88 4.09 5.15 8.86 19 I4_AR3 ActiveIntronRegion 1 10.49 2.21 8.71 9.26 5.67 0.00 2.87 11.56 5.30 11.68 25.72 35.77 15.77 87.06 74.47 72.30 34.23 8.19 33.86 8.78 5.49 5.57 9.73 20 I4_SR3 SilentIntronRegion 1 5.92 3.12 3.59 2.64 2.90 2.11 2.03 6.51 6.30 8.86 19.81 25.68 10.26 77.20 51.85 40.16 37.03 0.76 3.07 2.66 5.82 2.58 6.36 21 E5_Aa NovelBoundary 1 13.11 2.83 3.55 7.46 4.33 0.00 0.00 9.86 7.78 4.27 7.90 38.86 13.47 60.51 34.61 50.07 31.32 2.57 13.08 3.20 6.18 5.51 0.00 22 ER5a ExonRegion 0 10.46 3.44 6.10 4.94 2.78 0.84 0.49 13.64 0.64 11.30 36.54 8.95 13.84 73.53 69.83 36.47 44.64 5.87 33.43 11.59 7.96 2.39 8.70 23 E5_Da NovelBoundary 0 3.48 0.00 6.42 4.83 7.56 0.00 7.82 12.94 2.40 7.39 19.53 12.00 12.99 106.48 89.13 89.63 34.41 9.78 11.67 3.20 8.59 0.00 8.71 24 E5a_E6a KnownJunction 0 0.00 0.00 0.00 1.76 0.00 0.00 0.00 0.00 1.48 0.00 0.00 0.00 0.00 2.35 0.00 0.00 0.00 0.00 6.96 0.00 0.00 0.00 0.00 25 E5a_E6b KnownJunction 0 0.00 0.00 0.00 3.33 0.00 0.00 5.79 8.67 0.00 8.78 4.42 0.00 21.59 17.84 37.33 11.96 11.59 2.45 8.66 3.00 0.00 0.00 3.67 26 I5 Intron 0 2.54 0.00 0.00 0.00 1.61 0.00 0.00 0.00 0.00 1.03 16.24 13.29 11.59 49.81 45.26 39.23 9.90 0.00 17.20 3.83 2.64 1.25 3.52 27 I5_AR1 ActiveIntronRegion 0 2.60 0.00 0.00 0.00 1.64 0.00 0.00 0.00 0.00 1.04 16.63 13.61 11.81 50.95 46.32 40.11 10.14 0.00 17.62 3.92 2.68 1.28 3.61 28 E6_Aa NovelBoundary 0 9.71 0.00 0.00 3.63 6.96 0.00 1.94 7.15 3.59 9.00 14.42 12.60 6.49 39.79 59.83 10.94 26.18 2.24 25.88 11.95 0.00 2.69 0.00 29 E6_Ab NovelBoundary 0 0.00 0.00 1.12 1.70 0.00 2.90 0.00 11.54 0.00 0.00 23.80 0.00 6.82 75.58 48.33 16.58 21.51 0.00 12.52 7.99 17.67 0.00 0.00 30 ER6a ExonRegion 0 0.00 0.00 0.36 1.21 0.30 0.00 0.15 3.58 1.05 0.51 14.39 0.00 6.43 41.63 19.88 12.22 9.90 0.34 1.89 2.84 8.57 0.08 0.11 31 ER6b ExonRegion 0 6.93 3.47 4.17 3.82 2.73 1.75 1.80 12.86 4.17 11.43 30.54 29.58 26.88 106.04 85.86 55.73 39.84 10.99 20.86 8.68 11.53 3.13 9.51 32 E6_Da KnownBoundary 1 11.04 3.35 4.26 6.19 3.90 0.00 0.00 8.05 5.61 16.20 31.01 68.87 26.13 146.57 115.83 78.27 48.71 3.61 29.93 9.33 11.55 5.94 13.06 33 ER6c ExonRegion 1 6.20 1.35 3.98 2.24 4.53 0.46 1.63 9.68 1.79 12.22 27.18 46.01 32.78 102.75 64.77 44.20 39.89 1.98 10.43 4.15 7.82 4.28 8.51 34 IG10 Intergenic 0 5.28 2.25 5.49 4.02 3.92 1.02 1.42 8.87 5.90 11.03 41.40 44.36 42.60 126.44 91.85 74.50 55.29 5.67 14.88 8.00 5.93 4.45 8.14 35 IG10_SR1 SilentIntergenicRegion 0 5.85 2.71 5.04 3.17 4.87 0.30 1.49 8.13 5.97 9.73 38.86 45.91 58.84 132.02 87.81 72.70 60.03 6.34 14.32 7.23 6.35 4.67 7.49 36 IG10_AR2 ActiveIntergenicRegion 0 10.85 8.98 4.68 7.14 1.95 0.00 3.11 10.62 8.15 13.35 79.00 88.48 53.55 191.85 147.75 94.19 72.38 8.63 14.07 3.48 2.20 9.05 7.96 37 IG10_AR1 ActiveIntergenicRegion 0 4.22 1.20 6.03 4.61 3.15 1.83 1.19 9.48 5.65 12.17 40.72 38.93 25.41 115.29 91.09 74.74 49.15 4.74 15.57 9.22 5.87 3.83 8.83