Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FBXL21 Gene 0 2.67 17.24 15.14 1.78 0.18 6.12 1.05 4.51 8.46 15.90 0.00 0.06 0.00 0.00 0.00 0.00 0.00 0.00 0.21 3.05 0.33 1.19 2.52 2 495672 Transcript 0 0.19 0.41 0.41 0.00 0.00 0.55 0.00 0.82 0.72 0.92 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.69 0.00 3 475169 Transcript 0 0.00 9.08 10.20 3.10 0.00 2.33 0.00 2.30 16.00 14.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.95 4 472159 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 467490 Transcript 0 0.00 0.00 0.54 0.00 0.00 0.00 0.00 0.00 0.52 1.11 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.31 6 297158 Transcript 0 0.00 0.73 0.18 0.06 0.00 0.04 0.00 0.16 0.41 0.44 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.05 0.00 0.05 0.21 7 478939 Transcript 0 3.33 7.55 6.48 0.78 0.00 0.00 0.00 0.00 3.00 0.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 498734 Transcript 0 0.17 1.28 1.28 0.16 0.00 0.00 0.00 0.40 1.18 2.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.17 0.00 0.00 0.00 9 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER1b ExonRegion 0 0.00 0.00 1.79 0.00 0.00 1.04 0.00 1.50 2.23 0.89 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.08 0.00 1.59 0.00 11 E1_Ac KnownBoundary 0 0.00 0.00 5.35 0.00 0.00 2.56 0.00 0.00 2.63 1.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.75 0.00 0.00 0.00 12 ER1c ExonRegion 0 0.00 0.00 2.07 0.00 0.00 0.31 0.00 0.92 1.44 0.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.88 0.00 0.00 0.00 13 E1a_E2a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14 E1a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.55 0.00 1.18 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15 E2a_E5d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.35 4.94 0.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER2b ExonRegion 0 0.00 2.50 0.00 0.00 0.00 0.00 0.00 1.73 6.74 2.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.68 0.00 0.00 0.00 18 ER2c ExonRegion 0 1.50 7.88 0.90 0.00 0.00 1.88 3.75 0.29 9.19 8.51 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.39 0.00 0.61 0.04 19 E2b_E3a KnownJunction 0 0.00 0.00 5.74 0.00 0.00 4.94 0.00 0.00 7.78 6.47 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.88 0.00 3.12 0.00 20 ER3a ExonRegion 0 0.11 9.37 5.14 0.35 0.00 3.70 0.00 1.45 9.91 16.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.67 0.00 1.41 4.40 21 E3a_E4a KnownJunction 0 0.00 0.00 1.27 0.00 0.00 0.00 0.00 0.00 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 22 E3a_E5b KnownJunction 0 0.00 9.08 10.20 3.10 0.00 2.33 0.00 2.30 16.00 14.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 11.95 23 E4_Aa NovelBoundary 0 0.00 10.06 7.04 1.86 0.00 0.00 0.00 5.09 1.79 8.54 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 15.19 0.00 24 ER4a ExonRegion 0 0.93 2.03 0.77 0.00 0.00 2.75 0.00 0.00 0.65 3.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.80 0.00 25 E4a_E5b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.16 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.63 0.00 26 ER5a ExonRegion 0 0.00 1.45 0.35 0.13 0.00 0.09 0.00 0.33 0.82 0.87 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.10 0.00 0.10 0.42 27 ER5b ExonRegion 0 1.96 17.60 11.10 1.52 0.00 3.17 0.00 4.64 8.45 21.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.43 3.52 0.00 1.34 7.44 28 E5_Da KnownBoundary 0 0.00 36.11 13.07 0.00 0.00 13.29 0.00 4.89 5.70 9.43 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12.21 0.00 2.51 0.00 29 ER5c ExonRegion 0 1.22 21.40 15.26 2.20 0.00 7.30 0.52 2.57 9.87 15.10 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.10 4.05 1.48 0.98 7.53 30 E5_Ac KnownBoundary 0 0.00 0.00 9.52 0.00 0.00 0.00 2.03 0.00 4.43 12.20 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.27 31 E5_Ad KnownBoundary 0 0.00 20.85 0.00 0.00 0.00 4.88 0.00 0.00 3.36 11.01 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.15 0.00 0.00 32 ER5d ExonRegion 0 0.00 12.65 11.03 0.00 0.00 3.67 1.32 0.00 7.00 22.94 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.24 2.20 0.00 2.94 33 ER5e ExonRegion 0 0.65 23.16 11.13 0.00 0.00 3.67 0.18 0.00 9.16 20.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.59 5.79 3.31 0.00 3.83 34 E5_Db KnownBoundary 0 3.11 28.35 15.88 0.00 0.00 0.00 0.00 2.14 10.27 12.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.61 12.14 3.15 0.00 7.94 35 ER5f ExonRegion 0 1.61 14.64 13.08 0.49 0.00 3.99 0.00 0.00 10.07 19.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.88 5.96 1.43 0.89 6.26 36 E5c_E6a KnownJunction 0 0.00 3.03 5.88 2.06 0.00 7.95 0.00 0.00 5.09 19.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.88 0.00 0.00 4.10 37 ER6a ExonRegion 0 0.00 10.12 8.12 0.37 0.00 9.80 0.25 2.12 9.71 19.48 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.80 0.91 0.42 3.51 38 E6a_E7a KnownJunction 0 0.00 14.54 3.19 0.00 0.00 18.28 2.21 4.35 7.61 13.91 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.20 0.00 3.12 4.18 39 E7_Aa NovelBoundary 0 0.00 9.54 15.08 0.00 0.00 2.73 0.00 4.03 10.13 5.86 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 40 ER7a ExonRegion 0 1.83 16.86 11.06 1.06 0.00 3.89 0.61 6.69 6.88 14.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.58 0.65 1.09 1.59 41 E7_Da KnownBoundary 0 0.00 9.41 10.17 2.06 0.00 5.79 0.00 12.73 3.18 7.55 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.62 0.00 5.88 4.35 42 E7a_E7b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 43 ER7b ExonRegion 0 1.97 28.62 22.70 2.96 0.00 8.48 2.51 12.84 13.99 26.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.69 0.00 2.30 1.80 44 E7_Db KnownBoundary 0 3.19 21.58 35.04 1.56 0.00 9.43 1.90 16.84 12.76 27.37 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.13 0.00 2.45 0.00 45 ER7c ExonRegion 0 4.29 25.83 24.30 2.80 0.00 17.31 2.50 9.09 12.51 30.23 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.81 0.00 2.08 1.91 46 E7_Ab KnownBoundary 0 0.00 33.35 20.76 1.47 0.00 17.55 5.17 6.74 17.68 35.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.43 0.00 2.27 0.00 47 ER7d ExonRegion 0 4.03 34.07 30.42 5.78 0.00 12.63 4.86 9.47 14.53 34.09 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.10 3.87 0.00 3.09 3.58 48 E7_Dc KnownBoundary 0 0.00 31.31 25.63 2.06 0.00 17.72 6.18 11.05 11.40 30.38 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.82 0.00 2.51 3.41 49 E7c_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 50 ER7e ExonRegion 0 13.43 39.99 39.33 4.58 0.84 19.44 2.77 9.51 12.50 25.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.10 7.09 0.00 3.06 5.37 51 E7_Ac KnownBoundary 0 16.00 46.83 25.99 2.00 0.00 22.03 1.72 9.45 8.91 19.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.76 0.00 3.12 0.00 52 ER7f ExonRegion 0 8.25 29.36 36.01 1.96 0.00 9.73 0.24 5.63 13.97 27.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.06 0.00 2.67 1.28 53 E7_Dd KnownBoundary 0 7.19 31.44 40.57 2.73 0.00 2.27 0.00 2.05 14.09 26.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.75 0.00 3.06 4.01 54 E7d_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 55 ER7g ExonRegion 0 7.92 38.78 30.65 5.23 0.88 10.93 1.53 3.31 13.48 25.74 0.00 0.59 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.98 1.09 1.22 4.21 56 E7_De NovelBoundary 0 9.26 12.50 21.70 2.06 0.00 0.00 0.00 4.03 9.20 6.80 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.13 5.68 0.00 7.09 57 E7_Df NovelBoundary 0 13.63 22.76 7.66 3.76 0.00 7.27 2.25 2.55 4.75 11.07 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.12 0.00 58 ER7h ExonRegion 0 3.33 7.55 6.48 0.78 0.00 0.00 0.00 0.00 3.00 0.49 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 59 Ix Intron 0 4.15 20.86 9.79 1.99 0.00 8.08 0.00 2.49 0.90 10.80 0.00 1.71 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.09 0.00 0.00 2.85 60 Ix_AR1 ActiveIntronRegion 0 4.23 21.27 9.98 2.03 0.00 8.23 0.00 2.54 0.92 11.00 0.00 1.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.13 0.00 0.00 2.91 61 E8_Aa NovelBoundary 0 7.56 38.02 57.80 11.69 4.33 10.39 4.37 11.67 23.38 28.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.94 0.00 2.45 8.45 62 ER8a ExonRegion 0 1.59 21.33 30.91 1.52 0.67 4.13 0.99 11.65 10.97 15.21 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.26 0.00 1.58 2.20 63 E8_Da NovelBoundary 0 0.00 27.69 27.23 1.96 0.00 8.06 0.00 6.45 13.80 16.31 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9.08 0.00 3.12 0.00 64 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 65 E8a_E10a KnownJunction 0 0.00 0.00 1.63 0.00 0.00 0.00 0.00 0.00 0.00 1.64 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 66 Ix_AR1 ActiveIntronRegion 0 2.90 17.73 17.02 4.91 0.51 2.56 1.09 0.26 7.40 11.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.19 0.00 4.04 0.00 1.28 0.00 67 E9_Aa NovelBoundary 0 0.00 14.54 16.29 1.90 0.00 11.13 0.00 4.15 9.03 15.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.26 0.00 0.00 0.00 68 ER9a ExonRegion 0 0.68 5.10 5.12 0.65 0.00 0.00 0.00 1.60 4.73 9.27 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.68 0.00 0.00 0.00 69 E9_Da NovelBoundary 0 3.78 16.90 23.71 21.14 3.90 2.10 3.97 31.05 19.65 13.48 2.37 0.00 0.00 0.00 0.00 0.00 0.00 10.32 0.00 2.88 0.00 2.82 7.51 70 E9a_E10a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 71 ER10a ExonRegion 0 0.00 0.07 0.45 0.00 0.00 0.29 0.00 0.82 1.89 1.79 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.33 0.00 72 E10_Da KnownBoundary 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 73 ER10b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.56 0.04 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.94