Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 KLHL3 Gene 0 53.17 31.34 20.33 20.05 37.24 11.16 17.74 29.34 55.16 52.35 13.15 23.60 13.85 33.13 21.75 38.39 20.39 37.55 18.58 26.02 7.79 9.29 7.82 2 309755 Transcript 0 8.24 1.12 6.56 5.68 2.38 1.53 3.62 6.77 14.10 8.70 6.93 5.56 4.46 20.79 9.62 25.20 3.76 18.59 8.52 17.57 2.35 3.19 1.64 3 394937 Transcript 0 1.74 3.03 0.54 0.68 0.00 0.00 0.17 0.97 1.85 0.93 0.60 0.81 0.88 1.62 0.54 1.67 0.41 1.62 0.80 1.20 0.28 0.26 0.00 4 IG29_AR5 ActiveIntergenicRegion 0 2.61 17.18 4.90 8.73 9.33 16.40 12.67 19.16 17.39 10.81 1.67 5.87 0.90 1.08 2.14 0.14 2.38 1.25 0.45 7.43 0.00 0.68 0.85 5 IG29_SR3 SilentIntergenicRegion 0 1.35 24.35 6.50 16.28 24.30 23.89 9.45 25.93 37.74 19.43 0.00 0.00 2.08 0.00 0.00 2.81 0.00 6.62 2.39 8.57 0.00 2.89 5.47 6 IG29_AR4 ActiveIntergenicRegion 0 2.67 23.55 4.93 13.93 12.56 13.76 13.46 25.41 26.92 11.26 2.58 3.96 1.72 1.06 1.13 0.66 1.22 3.92 3.89 12.42 0.16 0.89 1.46 7 IG29_SR2 SilentIntergenicRegion 0 1.87 17.52 3.06 11.73 15.58 15.75 11.74 28.24 22.60 8.62 1.08 7.48 2.04 2.27 2.37 1.53 1.37 6.94 2.48 9.53 0.57 1.40 0.19 8 IG29_AR3 ActiveIntergenicRegion 0 5.58 13.55 7.75 14.73 20.55 24.33 13.94 38.22 21.70 7.03 2.68 3.83 1.39 1.20 0.45 0.00 3.05 7.08 3.34 11.36 0.21 1.71 0.28 9 IG29_AR2 ActiveIntergenicRegion 0 5.23 16.51 2.85 5.77 10.70 20.28 10.90 4.22 10.83 4.86 0.00 0.00 2.21 0.00 0.00 0.00 0.00 3.42 0.00 2.13 2.33 0.00 0.00 10 ER1a ExonRegion 0 3.14 2.24 2.59 2.87 4.77 3.06 5.60 4.79 8.37 4.37 6.23 4.81 1.44 10.32 5.88 14.76 3.78 9.87 4.44 8.92 1.61 1.47 3.27 11 E1a_E3b KnownJunction 0 13.34 0.00 10.53 8.49 0.00 0.00 1.63 8.75 19.82 13.03 7.63 6.30 7.47 31.26 13.35 35.63 3.74 27.32 12.61 26.21 3.09 4.90 0.00 12 ER2a ExonRegion 0 0.30 1.74 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER3a ExonRegion 0 3.17 4.32 1.07 1.36 0.00 0.00 0.33 1.94 3.71 1.86 1.21 1.62 1.76 3.25 1.09 3.34 0.83 3.23 1.59 2.39 0.55 0.52 0.00 14 ER3b ExonRegion 0 9.44 10.77 8.11 7.86 3.58 9.17 7.32 13.62 31.01 13.59 9.34 25.79 12.02 28.03 19.21 45.86 21.77 40.48 8.81 15.89 6.41 6.76 4.66 15 E3a_E4a KnownJunction 1 3.70 15.33 5.82 14.75 16.21 13.51 22.88 7.97 32.61 17.76 10.42 55.97 26.30 31.73 10.75 28.80 7.11 47.55 8.94 30.36 11.74 2.57 3.93 16 ER4a ExonRegion 0 4.53 12.33 12.35 11.21 8.25 5.69 12.74 15.91 43.56 17.14 11.31 29.74 11.05 26.97 14.10 34.19 24.68 58.47 13.63 20.36 4.45 5.00 4.31 17 E4a_E5a KnownJunction 0 6.82 3.35 13.48 7.52 4.33 5.79 5.34 16.35 32.73 17.81 7.05 18.46 12.50 29.31 14.59 43.41 29.36 43.98 7.62 17.58 5.68 0.00 3.59 18 ER5a ExonRegion 0 16.86 14.05 11.59 8.75 10.48 6.54 10.68 14.38 40.85 21.72 23.21 32.90 6.61 39.27 14.03 45.07 39.61 52.31 12.98 21.70 9.01 2.49 5.95 19 E5a_E6a KnownJunction 0 16.15 6.64 16.50 1.73 19.61 11.36 8.61 10.93 32.23 14.83 19.43 24.76 0.00 23.96 15.95 23.16 60.59 45.31 4.05 21.41 2.84 2.57 8.28 20 ER6a ExonRegion 0 19.97 9.77 8.00 2.21 11.92 8.22 13.95 13.11 35.08 23.37 26.35 41.94 13.09 32.29 15.13 39.73 28.07 43.43 15.52 26.54 8.27 4.61 7.53 21 E6a_E7a KnownJunction 0 28.60 5.92 3.70 7.52 16.13 11.13 21.11 12.53 38.37 23.18 18.11 23.86 13.47 49.50 31.89 31.36 3.93 51.78 8.19 36.75 5.00 0.00 8.71 22 ER7a ExonRegion 0 12.49 4.84 10.22 3.18 11.04 7.30 8.09 11.83 32.90 22.41 20.23 37.63 7.89 35.55 11.37 30.59 13.68 32.25 12.16 26.25 4.67 6.84 12.44 23 E7a_E8a KnownJunction 0 3.63 12.23 21.41 3.50 20.54 6.81 6.54 14.38 45.08 26.16 14.90 36.76 32.47 36.49 4.45 38.62 16.18 21.51 24.28 17.83 0.00 12.98 4.35 24 ER8a ExonRegion 1 12.59 10.10 15.23 3.05 10.25 4.53 10.41 19.12 51.90 40.14 16.09 28.42 34.67 34.55 8.33 39.98 20.14 31.59 24.56 27.22 3.99 7.75 9.01 25 E8a_E9a KnownJunction 1 19.71 9.27 25.78 5.46 16.04 2.61 2.12 13.47 53.96 36.94 7.63 47.87 0.00 26.02 4.45 32.90 36.09 40.54 13.27 16.94 2.41 5.39 0.00 26 ER9a ExonRegion 0 17.30 11.73 11.75 5.31 10.72 7.43 9.89 15.92 40.58 42.28 14.23 42.66 20.89 36.84 12.40 36.58 27.29 29.51 26.88 25.22 8.21 8.90 5.13 27 E9_Da NovelBoundary 0 3.19 6.64 3.19 3.30 7.89 0.00 3.44 5.96 14.06 20.95 0.00 6.30 7.95 0.00 0.00 4.02 4.77 10.49 0.00 5.69 8.53 0.00 0.00 28 E9a_E10a KnownJunction 1 13.41 9.47 1.57 1.80 3.90 2.16 7.38 12.57 17.97 38.44 2.21 25.06 7.63 18.84 4.45 46.23 4.58 20.73 7.53 37.33 2.35 5.88 0.00 29 ER10a ExonRegion 1 13.02 2.81 0.94 3.20 8.71 6.17 5.92 8.35 24.62 28.38 7.16 33.17 4.73 26.30 8.58 24.43 10.18 27.22 6.13 16.95 5.68 4.13 5.13 30 E10a_E11a KnownJunction 0 9.33 0.00 3.67 3.40 8.15 0.00 2.25 8.83 26.65 22.08 5.21 18.91 0.00 37.85 17.80 22.05 25.71 27.36 8.09 32.02 0.00 6.98 12.29 31 ER11a ExonRegion 0 5.28 0.63 4.51 4.14 5.22 4.68 4.23 10.48 24.58 24.70 7.12 7.85 3.20 20.63 12.37 27.83 10.67 26.91 4.20 20.76 3.82 1.77 5.99 32 E11a_E12a KnownJunction 0 7.26 2.70 6.00 6.09 3.65 0.00 0.00 10.06 26.27 25.84 5.11 6.30 0.00 2.41 17.80 33.67 8.79 15.67 4.33 6.52 0.00 0.00 17.41 33 ER12a ExonRegion 0 5.13 2.85 3.76 5.99 2.44 0.59 3.31 7.13 27.14 17.12 10.14 2.46 6.21 13.87 5.83 17.05 9.94 17.14 7.87 21.32 5.27 1.94 4.66 34 E12a_E13a KnownJunction 0 21.71 0.00 1.83 3.96 12.65 2.84 0.00 5.42 22.80 17.35 2.68 0.00 0.00 25.96 10.75 8.72 8.32 6.47 4.80 7.80 5.50 0.00 3.84 35 ER13a ExonRegion 0 10.19 4.82 6.40 1.04 15.70 6.57 4.72 6.55 24.52 20.72 6.41 4.33 2.98 19.83 9.65 17.60 16.61 19.71 7.16 18.13 4.75 2.08 6.35 36 E13a_E14a KnownJunction 0 3.04 2.63 1.69 3.00 4.33 5.34 0.00 3.66 27.60 21.95 0.00 0.00 0.00 21.78 4.45 11.02 8.70 21.35 8.38 36.43 5.19 2.51 7.85 37 I13_AR1 ActiveIntronRegion 0 2.86 3.32 2.58 1.14 0.28 1.61 3.83 6.58 8.79 8.07 2.57 0.00 3.23 2.75 2.05 3.95 0.00 14.54 4.56 12.26 1.60 1.05 1.94 38 E14_Aa NovelBoundary 0 0.00 13.16 0.00 2.03 7.72 0.00 2.25 0.00 10.16 6.98 2.37 0.00 0.00 4.83 0.00 11.96 4.58 22.47 0.00 9.52 2.72 0.00 8.11 39 ER14a ExonRegion 0 11.35 7.05 3.71 5.78 12.68 2.93 6.66 13.57 38.67 34.28 6.20 2.46 4.92 22.85 12.12 28.35 19.92 37.05 13.80 31.52 8.88 4.63 6.75 40 E14a_E15a KnownJunction 0 14.37 3.35 13.07 6.59 3.90 0.00 8.97 9.20 39.21 38.39 4.47 11.70 5.84 17.01 33.75 33.24 12.53 32.38 9.41 20.84 10.56 3.12 15.37 41 ER15a ExonRegion 0 15.98 6.10 9.26 6.50 17.19 5.09 9.30 18.46 51.98 42.60 6.07 17.11 6.84 32.16 15.15 38.64 15.22 60.33 14.36 24.66 9.78 6.89 7.40 42 E15a_E16a KnownJunction 1 6.67 18.22 3.19 20.14 14.43 19.25 11.48 23.12 44.65 49.08 2.68 18.76 13.64 57.04 4.45 47.94 16.74 58.74 16.94 29.21 8.59 14.57 7.00 43 ER16a ExonRegion 0 73.58 43.24 26.74 27.37 50.71 13.99 22.54 37.94 67.18 66.56 14.11 25.64 16.48 37.27 26.88 42.88 22.32 40.76 22.16 28.92 8.92 11.74 8.76