Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ZNF300 Gene 0 55.02 243.75 98.74 136.75 156.66 112.87 150.71 84.45 62.76 160.44 0.43 2.30 18.88 0.56 0.88 1.01 3.05 174.04 69.30 166.53 15.11 45.58 19.42 2 394226 Transcript 0 4.77 25.32 2.57 5.01 15.73 21.33 20.67 4.22 4.63 21.59 0.00 0.00 0.00 0.00 0.00 0.00 0.70 172.80 37.26 36.17 5.97 8.38 12.60 3 274599 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 427179 Transcript 0 20.26 113.95 43.40 72.15 86.19 51.74 96.26 50.64 46.51 98.85 0.27 2.73 26.74 0.36 0.19 1.26 2.33 66.49 27.44 121.69 6.12 33.19 7.84 5 446148 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 2.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.46 1.97 0.91 0.00 0.00 0.00 6 ER1a ExonRegion 0 9.54 50.64 5.13 10.02 31.47 42.65 41.34 8.45 9.26 43.18 0.00 0.00 0.00 0.00 0.00 0.00 1.41 345.60 74.52 72.34 11.94 16.77 25.20 7 E1_Ab KnownBoundary 0 13.71 105.24 6.62 11.39 74.19 75.01 39.13 18.98 32.46 70.46 0.00 0.00 0.00 0.00 0.00 0.00 3.93 293.57 64.19 128.79 36.51 13.84 32.69 8 ER1b ExonRegion 0 9.74 100.36 13.39 17.89 52.31 68.08 42.60 31.67 35.82 93.99 0.00 0.00 0.00 0.00 0.00 0.00 3.14 244.64 71.03 133.08 40.33 17.76 24.30 9 E1_Ac KnownBoundary 0 10.89 99.52 14.87 24.51 62.82 76.83 58.47 50.36 21.47 123.65 0.00 0.00 0.00 0.00 0.00 0.00 0.00 226.50 64.85 152.06 47.88 17.57 28.68 10 ER1c ExonRegion 0 9.56 45.03 15.81 33.54 33.24 24.83 26.63 26.62 33.65 106.66 0.00 0.00 2.32 0.00 0.00 0.00 0.00 443.35 93.87 127.06 35.23 22.65 34.00 11 E1a_E2a KnownJunction 0 3.70 28.42 28.18 31.56 23.77 22.20 31.89 35.00 53.70 101.03 0.00 0.00 0.00 0.00 0.00 0.00 0.00 638.34 185.13 160.18 52.45 23.51 27.91 12 ER2a ExonRegion 0 2.38 55.82 25.85 31.78 32.48 71.07 64.50 43.17 49.42 115.04 0.00 0.00 9.54 0.00 0.00 0.00 1.48 426.17 98.80 174.71 35.61 31.03 38.56 13 E2a_E4a KnownJunction 0 6.15 87.16 18.12 37.99 46.52 82.00 100.21 34.34 42.22 93.35 0.00 0.00 13.47 0.00 0.00 0.00 0.00 210.00 48.94 116.97 16.25 15.92 47.12 14 E2a_E5a NovelJunction 0 0.00 11.38 1.77 7.06 7.89 5.74 10.20 2.38 1.79 16.63 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54.22 4.14 11.95 6.30 0.00 4.35 15 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 2.40 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.46 1.97 0.91 0.00 0.00 0.00 16 ER4a ExonRegion 0 2.82 68.08 26.87 36.51 60.52 55.23 70.42 35.23 40.55 83.61 0.00 0.00 14.74 0.00 0.00 0.00 0.00 190.23 41.49 115.35 14.74 9.87 35.59 17 E4a_E5a KnownJunction 0 0.00 68.01 30.78 35.83 73.94 49.52 75.39 38.32 32.35 64.63 0.00 0.00 13.15 0.00 0.00 0.00 0.00 162.75 26.35 143.49 17.98 10.59 30.99 18 I4_SR3 SilentIntronRegion 0 3.59 9.18 33.57 4.60 6.48 5.83 8.31 3.53 8.31 8.41 0.00 1.47 2.24 0.50 0.00 0.75 0.00 9.45 2.31 13.21 0.42 3.27 0.55 19 I4_SR4 SilentIntronRegion 0 2.64 37.78 16.92 5.51 7.25 4.79 10.48 4.31 9.48 7.85 0.00 0.00 2.73 1.19 0.00 0.00 0.00 8.14 2.24 14.09 1.59 10.51 1.37 20 ER5a ExonRegion 0 12.83 123.73 31.11 35.31 59.39 54.12 53.67 38.33 43.68 102.61 0.78 1.43 4.06 0.00 0.00 0.00 1.33 228.79 43.64 145.28 24.80 27.00 17.62 21 E5_Da NovelBoundary 0 0.00 3.03 33.32 0.00 4.33 0.00 2.25 2.46 5.01 2.85 0.00 0.00 0.00 2.47 0.00 0.00 0.00 6.05 0.00 3.26 0.00 0.00 0.00 22 E5a_E6a KnownJunction 0 29.56 135.30 22.91 45.48 31.24 57.41 67.83 34.42 47.60 138.77 0.00 0.00 6.17 0.00 0.00 0.00 0.00 197.44 48.10 144.13 31.38 29.27 7.77 23 ER6a ExonRegion 0 18.03 125.65 35.16 60.60 73.68 85.91 105.29 58.66 53.40 126.47 0.00 1.48 16.32 0.55 0.00 0.00 2.74 216.04 51.77 170.11 14.64 28.41 25.64 24 E6_Da KnownBoundary 0 6.74 56.31 20.49 18.75 39.73 36.97 35.15 23.17 27.11 59.53 0.00 0.00 6.82 0.00 0.00 0.00 0.00 78.39 17.88 51.33 8.22 18.68 13.06 25 E6a_E6b KnownJunction 0 16.67 58.94 16.03 32.50 31.07 46.56 47.56 11.42 11.52 48.35 0.00 0.00 6.49 0.00 0.00 0.00 0.00 99.41 34.92 62.96 0.00 5.27 17.24 26 E6_Db KnownBoundary 0 6.45 32.89 6.77 25.54 28.52 26.35 34.18 14.62 22.77 44.94 0.00 0.00 6.82 0.00 0.00 0.00 0.00 57.21 20.52 73.12 3.15 25.53 7.51 27 E6b_E6c KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 28 ER6b ExonRegion 0 11.64 105.75 30.02 43.27 78.93 49.97 74.80 41.92 52.49 102.93 0.00 0.00 35.18 0.00 0.00 0.00 0.00 169.53 43.80 125.00 9.92 53.13 16.89 29 ER6c ExonRegion 0 20.26 113.95 43.40 72.15 86.19 51.74 96.26 50.64 46.51 98.85 0.27 2.73 26.74 0.36 0.19 1.26 2.33 66.49 27.44 121.69 6.12 33.19 7.84 30 E6_Ab KnownBoundary 0 19.19 61.24 50.62 44.88 35.14 25.44 59.49 29.70 36.11 38.76 0.00 0.00 7.47 0.00 0.00 0.00 0.00 22.47 13.08 75.87 0.00 14.70 0.00 31 E6_Ac KnownBoundary 0 3.63 92.02 19.96 43.38 31.83 55.99 66.20 30.11 30.64 58.34 0.00 0.00 6.17 0.00 0.00 0.00 0.00 51.15 4.71 50.05 0.00 5.88 12.21 32 ER6d ExonRegion 0 35.98 215.56 87.92 139.01 111.71 128.82 179.73 78.21 82.14 149.96 0.00 0.00 42.21 0.00 0.00 0.00 5.78 192.17 67.69 215.96 2.20 50.00 25.70 33 ER6e ExonRegion 0 82.24 344.01 143.52 193.12 217.01 154.55 199.49 112.92 77.06 205.49 0.58 2.61 18.96 0.78 1.41 1.18 3.79 184.85 87.77 195.70 16.85 57.06 22.27 34 ER6f ExonRegion 0 3.53 51.52 2.86 6.81 0.89 1.83 9.27 9.22 1.24 7.26 0.00 0.00 0.00 0.00 0.00 0.00 1.10 0.00 0.00 7.80 0.00 0.00 4.89 35 IG5_SR3 SilentIntergenicRegion 0 1.20 1.75 28.44 0.72 2.04 0.92 1.06 1.30 1.99 1.47 0.17 1.26 1.77 0.37 0.00 0.73 0.78 1.74 0.28 2.40 0.85 1.30 0.52 36 IG5_AR2 ActiveIntergenicRegion 0 0.00 0.00 23.86 0.22 10.44 1.77 1.09 0.00 2.59 0.00 0.00 0.00 0.00 0.00 0.00 3.93 0.00 2.50 0.00 0.00 0.00 0.00 0.00 37 IG5_AR1 ActiveIntergenicRegion 0 0.00 0.00 18.22 0.00 1.68 0.00 0.50 0.00 0.69 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.04 1.20 0.80 1.67 0.00 1.11