Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PCYOX1L Gene 0 90.85 54.31 64.29 68.61 74.58 47.50 45.39 104.40 56.59 120.75 66.03 35.69 67.63 88.00 78.49 75.19 69.32 186.24 70.93 82.43 52.19 21.18 17.29 2 274569 Transcript 0 42.79 22.85 33.23 35.85 30.56 26.94 21.50 69.98 37.83 90.33 50.85 18.60 39.87 75.00 57.40 56.22 53.65 184.97 51.59 59.98 55.03 15.52 13.90 3 ER1a ExonRegion 0 4.62 2.92 1.81 0.07 3.84 4.58 5.24 5.43 3.61 6.23 4.30 1.28 0.10 14.90 5.95 10.67 5.53 24.70 16.02 8.08 7.01 1.50 1.05 4 E1a_E2a KnownJunction 0 0.00 0.00 3.31 0.00 0.00 0.00 0.00 6.33 1.45 4.57 0.00 0.00 0.00 6.71 14.09 0.00 8.23 9.49 0.00 3.26 17.54 0.00 0.00 5 I1 Intron 0 7.36 4.80 3.54 4.26 9.80 8.27 9.94 11.21 10.25 12.20 19.13 12.25 28.66 27.90 11.67 26.65 24.52 40.32 13.86 18.86 8.82 2.76 3.58 6 I1_SR1 SilentIntronRegion 0 7.49 4.62 3.59 4.39 9.91 8.65 10.29 11.64 10.74 12.56 20.01 12.65 28.95 28.52 11.83 27.36 25.11 42.36 14.48 19.27 9.08 2.87 3.71 7 I1_AR2 ActiveIntronRegion 0 6.13 9.43 3.17 2.32 9.30 2.13 4.60 4.46 2.13 6.91 4.48 6.20 28.30 20.49 10.48 17.22 17.22 5.86 3.69 13.56 5.11 1.21 1.70 8 E2_Aa NovelBoundary 0 33.64 14.54 1.09 1.56 16.13 10.45 8.52 17.09 13.43 16.65 19.43 0.00 19.97 23.90 33.13 16.92 35.72 41.08 3.58 17.32 17.17 5.20 0.00 9 ER2a ExonRegion 0 16.84 14.67 14.74 11.84 17.23 11.85 11.19 33.03 20.35 40.51 30.61 5.84 20.46 57.17 33.86 31.79 41.80 78.52 17.67 40.87 39.32 9.91 8.40 10 E2_Da NovelBoundary 0 3.48 8.42 0.00 3.90 4.33 0.00 1.90 16.02 1.56 8.70 12.21 0.00 6.82 25.13 13.85 16.58 33.75 23.09 13.27 5.69 8.77 0.00 0.00 11 E2a_E3a KnownJunction 0 16.67 6.71 19.46 17.61 10.44 15.22 8.79 29.45 20.69 50.98 34.90 0.00 0.00 41.97 33.25 8.03 33.66 124.03 35.95 43.91 15.01 8.57 20.06 12 I2 Intron 0 11.86 6.84 2.56 3.79 12.25 6.00 6.06 6.02 5.16 9.26 6.86 5.76 8.81 12.05 4.42 17.51 4.93 14.25 2.98 7.95 4.12 0.78 1.92 13 I2_SR2 SilentIntronRegion 0 15.14 8.82 3.14 4.94 15.55 6.73 7.73 7.01 6.71 10.90 8.35 7.57 8.95 13.05 5.56 20.00 4.88 16.87 3.91 8.74 3.65 1.02 2.06 14 E3_Aa NovelBoundary 1 13.71 9.27 5.17 3.16 8.57 13.74 6.76 14.91 9.03 17.46 0.00 18.46 13.64 14.24 8.90 18.71 4.77 35.36 16.47 8.82 16.99 0.00 3.33 15 ER3a ExonRegion 1 20.61 9.15 27.64 24.66 25.89 23.67 14.22 49.41 38.00 90.56 53.50 9.50 25.11 82.39 50.30 67.02 58.11 169.81 43.25 74.07 54.73 18.11 13.24 16 E3_Da NovelBoundary 0 7.33 0.00 6.03 4.76 11.54 5.22 5.87 6.20 12.01 24.55 7.32 6.15 0.00 12.66 0.00 23.67 8.98 63.59 14.40 24.93 0.00 0.00 12.80 17 E3a_E4a KnownJunction 0 31.78 13.88 25.10 30.90 40.83 32.48 11.57 76.36 42.04 125.53 61.54 36.76 61.03 94.53 84.93 53.66 74.61 217.88 63.15 76.19 61.72 20.76 20.74 18 I3 Intron 0 11.83 7.85 10.27 8.35 13.90 10.78 9.45 22.21 17.00 21.64 9.48 5.64 12.62 15.59 6.13 13.29 15.00 50.70 13.44 23.33 5.88 1.65 1.48 19 I3_AR1 ActiveIntronRegion 0 4.93 5.65 7.61 2.79 5.93 9.86 6.12 17.32 7.56 17.88 9.18 2.18 0.00 9.94 5.91 9.31 13.97 54.53 12.12 22.09 6.21 0.56 2.77 20 I3_AR2 ActiveIntronRegion 0 14.13 8.59 11.28 9.87 16.65 12.00 11.34 24.87 20.00 24.28 10.42 6.04 16.26 17.24 6.66 14.22 15.32 52.71 14.13 25.31 5.42 1.96 1.27 21 I3_SR2 SilentIntronRegion 0 7.61 6.12 9.32 6.99 4.83 5.06 0.87 13.15 10.19 11.42 3.60 10.85 2.86 13.72 3.37 14.04 17.57 32.94 13.11 15.90 11.53 1.22 1.76 22 E4_Aa NovelBoundary 0 34.15 9.34 11.53 11.55 4.33 12.66 6.23 31.05 20.37 34.84 17.32 0.00 5.84 14.19 5.19 22.39 20.66 68.11 17.22 23.71 14.27 5.33 4.35 23 ER4a ExonRegion 0 55.24 26.56 37.75 47.62 26.39 36.09 19.92 92.89 53.63 127.11 67.67 24.45 54.09 103.42 65.28 89.64 64.46 258.08 56.66 83.10 72.63 20.85 19.23 24 E4_Da NovelBoundary 0 7.04 5.66 15.17 2.93 12.82 8.46 3.80 15.48 10.04 8.27 10.27 0.00 0.00 12.13 5.44 15.81 14.31 52.19 17.60 11.95 2.78 0.00 0.00 25 E4a_E5a KnownJunction 0 72.16 33.09 40.54 52.74 36.67 25.33 32.11 107.57 41.52 100.38 75.65 17.41 26.46 100.12 63.91 54.94 44.13 285.28 53.74 60.47 93.72 17.27 3.93 26 ER5a ExonRegion 0 57.45 40.51 53.52 65.11 32.91 43.13 34.44 113.54 62.26 151.33 87.24 38.66 87.15 133.12 92.57 107.14 90.74 357.56 96.80 98.88 98.85 23.64 19.74 27 E5a_E6a KnownJunction 0 73.12 30.72 57.66 54.61 39.39 44.07 38.47 127.58 65.07 156.15 68.91 24.46 80.35 97.83 93.58 113.13 90.70 317.78 99.49 77.60 93.96 25.72 26.72 28 ER6a ExonRegion 0 122.22 73.12 83.97 89.14 102.59 59.95 60.55 128.24 67.49 140.32 75.04 46.29 83.84 92.89 93.72 82.42 78.18 191.49 84.80 93.37 50.83 24.43 19.76 29 IG27_AR2 ActiveIntergenicRegion 0 5.57 3.61 11.81 3.87 8.20 5.02 7.87 11.62 1.48 12.24 0.60 1.25 5.03 4.05 1.03 3.47 2.60 18.15 2.51 7.70 0.00 0.73 0.00 30 IG27_SR3 SilentIntergenicRegion 0 12.97 6.32 20.55 4.72 14.70 8.57 12.44 14.90 5.71 22.76 0.83 0.62 15.71 3.35 2.97 6.23 2.31 25.71 3.91 18.45 0.39 0.73 0.51