Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 UBE2D2 Gene 0 239.31 301.83 238.06 231.68 320.24 232.90 276.67 285.50 217.91 284.49 346.24 374.47 324.45 314.46 437.19 206.95 227.28 220.38 192.93 242.90 108.04 207.18 109.02 2 398733 Transcript 1 272.79 362.57 339.76 215.59 251.02 225.67 290.28 331.06 246.15 412.84 831.74 243.53 231.32 534.94 603.38 367.68 531.65 381.79 345.99 270.50 414.46 183.76 183.02 3 253815 Transcript 0 10.09 12.28 18.35 13.79 24.70 21.12 13.00 21.41 26.42 7.67 25.87 15.59 11.34 16.53 54.28 35.59 33.80 26.27 18.30 28.53 30.35 24.24 22.46 4 398734 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 IG16_AR1 ActiveIntergenicRegion 0 1.85 2.17 4.07 1.58 1.56 1.24 0.51 1.50 1.43 2.82 3.56 0.84 3.74 8.55 10.59 1.44 7.04 6.05 1.85 2.48 0.64 0.00 0.85 6 ER1a ExonRegion 1 13.16 24.38 34.13 20.34 33.83 68.79 38.58 32.27 29.18 66.77 166.31 22.84 47.41 136.42 178.56 98.10 114.83 104.72 84.39 58.81 89.59 37.87 55.15 7 E1a_E2a KnownJunction 0 9.19 5.99 11.18 6.23 31.49 40.15 15.55 10.60 15.36 2.47 13.90 6.60 6.66 4.89 28.56 21.87 26.55 20.52 8.00 9.14 22.36 19.59 8.71 8 E1a_E4a KnownJunction 1 272.79 362.57 339.76 215.59 251.02 225.67 290.28 331.06 246.15 412.84 831.74 243.53 231.32 534.94 603.38 367.68 531.65 381.79 345.99 270.50 414.46 183.76 183.02 9 ER2a ExonRegion 0 17.75 8.80 20.02 15.74 22.92 12.58 17.09 25.62 26.01 11.26 25.80 9.85 21.05 22.86 70.00 48.93 31.74 40.55 19.60 44.10 25.13 17.18 26.66 10 E2a_E4a KnownJunction 0 3.33 22.04 23.86 19.41 19.69 10.62 6.36 28.01 37.88 9.27 37.90 30.31 6.33 21.84 64.28 35.97 43.10 17.74 27.29 32.34 43.55 35.94 32.01 11 I2_AR4 ActiveIntronRegion 0 46.44 33.70 47.91 48.79 50.25 7.74 44.39 39.21 34.09 25.00 6.07 30.64 42.48 6.78 50.64 15.22 24.93 24.96 15.82 62.43 5.44 8.56 17.01 12 I2_AR5 ActiveIntronRegion 0 64.13 35.79 41.54 49.06 39.60 8.25 33.76 46.67 42.36 30.74 11.21 34.20 43.62 13.81 53.09 37.45 43.90 31.23 28.67 55.53 11.02 3.33 27.90 13 I2_AR6 ActiveIntronRegion 0 52.72 25.34 26.90 39.66 27.57 6.52 28.41 41.36 36.94 28.44 4.15 9.71 16.51 8.43 40.68 25.80 23.16 36.73 18.20 67.94 7.05 9.47 24.49 14 I2_AR9 ActiveIntronRegion 0 44.14 17.74 20.78 20.67 26.97 5.09 33.08 28.16 23.07 15.12 3.67 27.40 46.16 5.80 37.90 16.43 13.48 24.27 8.37 51.51 1.93 6.70 21.89 15 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 E4_Aa NovelBoundary 0 84.09 6.71 24.36 22.54 136.33 12.38 84.09 34.91 17.30 18.56 10.11 18.91 62.66 9.65 44.50 10.85 3.46 8.62 0.00 63.98 0.00 14.57 18.01 17 ER4a ExonRegion 0 219.69 431.34 270.52 223.77 249.93 190.20 261.11 328.70 278.13 382.26 708.77 501.88 375.79 711.80 896.80 470.15 485.75 486.51 361.34 332.55 345.16 325.00 234.89 18 E4a_E5a KnownJunction 0 292.87 538.00 265.96 238.03 226.06 120.33 277.34 281.32 242.65 343.19 519.39 298.90 312.15 600.86 911.80 436.12 410.94 481.90 311.73 346.75 185.70 319.70 183.36 19 I4_AR2 ActiveIntronRegion 0 17.99 35.59 30.02 34.07 42.81 14.67 48.99 19.88 16.67 25.81 16.43 31.03 19.54 16.78 31.91 34.67 29.71 85.00 10.62 36.52 11.02 14.24 11.75 20 I4_AR3 ActiveIntronRegion 0 16.93 37.19 30.63 34.46 45.11 21.74 39.53 16.79 17.64 27.69 16.84 31.54 10.72 16.47 18.65 37.36 26.88 82.88 9.56 34.65 12.91 4.76 8.81 21 I4_AR4 ActiveIntronRegion 0 28.48 31.25 13.98 30.60 29.12 7.24 34.74 17.16 18.83 23.61 4.53 21.22 21.73 7.22 28.26 30.93 15.97 49.77 12.44 32.23 9.91 12.59 9.92 22 ER5a ExonRegion 0 278.26 558.85 365.24 339.23 252.36 178.74 284.78 478.51 351.04 541.59 602.34 352.99 365.09 610.11 905.83 432.35 511.33 544.62 328.19 433.84 242.68 323.79 157.29 23 E5a_E6a KnownJunction 0 276.20 625.15 459.68 383.27 320.54 229.24 352.20 548.13 358.47 560.13 607.10 427.34 462.47 595.21 940.23 337.35 528.38 433.15 316.62 525.59 256.50 323.07 112.76 24 E6_Aa NovelBoundary 0 36.45 38.22 96.71 78.21 15.20 14.59 48.49 48.18 27.37 48.75 9.90 37.36 35.22 26.61 47.72 19.57 12.25 28.23 16.94 23.46 0.00 28.04 11.78 25 ER6a ExonRegion 0 345.26 606.48 561.64 518.09 535.56 346.71 479.46 683.43 509.37 730.46 1125.72 672.62 622.45 868.01 1113.67 537.12 777.53 558.87 434.72 638.49 393.45 508.70 251.53 26 E6a_E7a KnownJunction 0 158.03 400.98 436.89 477.53 393.29 143.04 291.74 551.62 449.33 627.41 570.62 382.02 412.64 447.59 662.96 314.02 383.26 349.16 260.24 382.99 151.11 360.73 152.37 27 ER7a ExonRegion 0 293.56 473.33 604.54 629.86 598.41 435.98 567.22 717.11 571.25 705.60 885.45 985.28 1154.99 911.85 1300.23 560.05 651.24 513.06 475.37 669.33 200.79 598.21 288.71 28 E7a_E8a KnownJunction 0 316.80 579.24 581.74 627.69 597.11 537.70 719.23 638.62 500.37 642.97 738.50 1291.17 1262.09 823.18 1303.42 429.72 544.83 354.05 384.29 618.53 150.49 547.73 215.37 29 ER8a ExonRegion 0 365.93 658.49 502.14 490.48 732.24 494.79 638.50 523.21 470.54 574.97 767.38 1011.21 1005.46 666.23 920.13 372.91 505.14 349.48 366.25 523.79 158.06 552.80 218.72 30 E8a_E9a KnownJunction 0 659.15 976.01 546.91 476.00 1106.71 718.05 917.44 545.46 473.43 558.22 920.08 1168.58 1087.10 766.38 1017.87 320.51 569.05 297.10 376.10 551.22 223.82 460.23 246.10 31 I8 Intron 0 59.19 31.90 21.26 45.41 57.27 16.27 43.28 50.46 26.71 43.67 4.94 15.86 37.86 15.44 37.56 22.15 11.25 30.42 16.62 25.90 4.61 7.99 9.90 32 I8_AR1 ActiveIntronRegion 0 36.84 21.74 11.01 32.35 72.99 28.16 56.69 21.48 18.63 30.48 6.46 34.07 35.90 23.79 41.49 18.46 17.40 21.84 22.71 26.46 3.35 9.76 11.83 33 I8_SR1 SilentIntronRegion 0 65.07 34.58 21.54 45.44 49.68 14.08 35.08 54.82 29.88 39.94 5.10 9.62 34.33 13.53 37.37 23.15 10.58 36.00 16.66 26.10 6.09 7.46 12.21 34 I8_AR2 ActiveIntronRegion 0 58.16 31.44 26.05 52.32 66.11 15.02 54.58 56.15 24.08 58.94 3.83 20.22 46.84 15.39 36.15 21.98 9.59 22.74 13.47 25.30 2.04 8.26 3.88 35 ER9a ExonRegion 0 534.62 536.08 452.27 401.91 622.02 444.82 531.25 528.91 400.50 503.71 590.01 771.09 591.01 545.26 749.73 351.31 356.10 375.51 348.47 416.24 158.96 388.40 187.95 36 E9_Da KnownBoundary 0 105.06 293.50 44.88 115.07 198.56 131.80 159.65 127.58 69.70 98.88 24.85 66.77 74.18 18.54 4.45 15.72 13.84 26.70 22.02 77.79 2.66 22.72 4.35 37 ER9b ExonRegion 0 85.90 198.92 73.38 132.74 159.85 96.58 121.75 120.25 77.48 103.83 22.24 64.15 64.67 17.42 47.49 22.35 24.71 41.28 27.47 82.30 5.42 28.24 10.40 38 IG17_SR1 SilentIntergenicRegion 0 11.95 11.31 5.16 14.44 16.28 2.04 14.87 19.42 10.57 7.91 0.17 3.35 7.64 3.11 10.59 11.72 6.51 11.50 7.10 12.40 0.76 0.54 7.55 39 IG17_AR4 ActiveIntergenicRegion 0 0.00 0.00 0.08 0.00 0.00 0.00 0.67 1.93 2.02 0.53 1.28 0.00 1.49 13.78 1.78 1.80 2.16 1.85 3.22 1.12 0.00 0.00 0.03 40 IG17_SR5 SilentIntergenicRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.19 1.99 1.07 0.00 4.05 5.30 45.68 0.00 3.26 3.30 1.85 0.00 1.92 0.00 0.00 0.00 41 IG17_AR5 ActiveIntergenicRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.19 1.24 0.00 0.00 4.33 4.69 12.45 0.00 2.97 2.75 0.00 0.00 0.00 0.00 0.00 0.00 42 IG17_SR6 SilentIntergenicRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.91 0.67 0.00 0.65 0.20 1.64 10.89 0.69 1.02 0.00 1.54 0.00 0.00 0.00 0.00 0.00