Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SLC36A1 Gene 0 26.06 31.71 20.34 13.16 21.93 21.80 23.20 36.25 47.53 44.45 37.67 20.78 33.09 46.55 26.82 43.40 31.74 48.52 32.38 49.25 39.29 72.67 89.26 2 429484 Transcript 0 0.00 0.65 0.00 0.16 0.85 0.15 0.95 1.40 0.79 0.99 1.97 0.97 1.29 3.87 0.35 1.42 1.05 1.85 1.52 1.37 1.05 2.49 1.21 3 243389 Transcript 0 22.19 15.97 16.67 7.66 10.49 10.09 13.64 19.15 40.08 35.68 26.70 12.14 30.40 42.45 19.51 36.05 23.30 55.38 29.81 50.31 32.24 78.12 93.63 4 440585 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5 456739 Transcript 0 3.25 0.40 0.02 0.40 0.00 0.72 2.85 0.54 0.00 0.00 0.75 2.09 0.75 1.05 2.11 0.00 1.29 0.00 0.00 1.26 0.43 0.40 0.65 6 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.02 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 E1a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 ER2b ExonRegion 0 1.59 0.00 0.20 0.80 0.00 0.31 0.99 0.14 0.93 1.43 1.93 0.00 0.00 0.81 0.00 6.19 5.23 0.31 0.00 0.35 2.39 4.86 7.59 10 ER2c ExonRegion 0 5.66 6.52 0.99 1.02 8.90 10.01 7.94 7.98 15.65 9.62 21.20 0.00 1.53 14.46 12.30 41.09 35.56 39.28 21.19 24.40 16.34 36.10 103.26 11 E2_Da KnownBoundary 0 0.00 8.75 0.00 0.00 0.00 0.00 1.68 10.02 21.21 11.52 2.16 0.00 6.82 0.00 4.45 4.36 3.46 14.30 0.00 5.94 5.81 5.02 11.27 12 E2a_E2d KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 13 ER2d ExonRegion 0 0.00 2.00 0.31 0.00 0.00 0.17 0.00 1.51 7.18 4.92 2.67 0.00 0.89 1.21 3.04 1.37 3.98 3.52 0.00 3.61 9.16 1.26 2.28 14 E2_Ad KnownBoundary 0 0.00 2.70 1.12 0.00 0.00 0.00 0.00 5.96 12.76 6.47 24.80 0.00 0.00 7.18 8.90 0.00 16.74 2.07 0.00 23.91 17.67 5.39 0.00 15 ER2e ExonRegion 0 0.87 1.99 2.45 1.15 0.00 0.00 0.84 8.13 7.97 5.68 22.84 0.89 2.66 19.01 5.93 9.66 25.21 4.70 10.71 27.13 30.45 18.99 16.42 16 E2b_E3a KnownJunction 0 3.26 6.25 3.25 2.06 0.00 0.00 2.25 20.66 20.66 10.26 17.85 0.00 6.82 19.25 10.26 27.09 29.36 12.56 36.14 29.34 34.84 42.86 71.02 17 ER3a ExonRegion 0 3.79 9.87 3.65 3.84 8.73 11.13 9.47 24.42 26.26 20.30 27.64 5.85 11.25 33.40 11.19 35.67 21.34 23.72 23.55 50.93 31.95 42.71 73.28 18 E3a_E4a KnownJunction 0 10.96 12.17 1.12 3.93 42.70 47.93 35.86 36.31 29.28 32.66 48.49 0.00 15.10 36.91 15.20 26.75 20.66 43.15 48.66 74.97 48.50 27.31 50.36 19 ER4a ExonRegion 0 15.91 15.08 9.32 5.68 12.97 20.55 22.16 22.45 40.65 41.45 41.67 23.93 19.79 49.69 20.66 26.52 34.13 30.17 19.08 63.06 44.20 58.54 48.28 20 E4a_E5a KnownJunction 1 0.00 27.63 11.89 5.43 7.81 8.52 14.57 27.27 43.06 41.42 36.90 14.10 19.97 65.51 10.51 24.95 30.76 38.01 8.00 49.60 17.17 42.56 49.08 21 ER5a ExonRegion 0 2.47 14.58 12.50 6.13 4.09 10.51 11.81 20.74 50.64 46.79 44.46 18.58 20.02 47.37 28.91 30.89 37.31 49.02 17.22 79.51 44.99 51.41 84.54 22 E5a_E6a KnownJunction 0 7.48 33.81 17.86 13.22 11.21 11.13 18.02 20.09 49.02 43.57 45.64 25.21 51.78 58.51 33.62 34.61 44.23 71.05 26.73 58.36 44.91 68.40 74.61 23 ER6a ExonRegion 0 9.00 15.76 17.08 10.25 7.25 12.55 18.69 34.46 56.94 45.04 55.19 35.18 44.36 59.01 27.05 51.86 46.52 94.08 31.16 65.09 50.69 78.15 121.26 24 E6a_E7a KnownJunction 1 0.00 19.67 17.21 1.60 8.49 41.11 14.93 60.17 49.57 44.78 47.12 30.61 26.62 66.57 8.90 24.87 44.79 115.12 9.51 88.53 56.09 56.27 109.69 25 ER7a ExonRegion 0 5.43 20.00 18.35 5.21 17.72 26.23 15.98 32.21 51.64 42.89 57.10 27.20 43.98 53.86 25.43 31.08 58.29 68.02 33.20 77.30 47.37 69.49 86.51 26 E7_Da NovelBoundary 0 14.67 0.00 1.69 0.00 3.74 0.00 0.00 4.15 1.30 1.67 2.53 0.00 13.64 0.00 0.00 4.10 4.21 0.00 0.00 3.26 0.00 0.00 0.00 27 E7a_E8a KnownJunction 0 3.33 15.26 24.36 6.66 19.35 18.06 22.13 33.23 48.96 35.05 38.17 31.36 59.57 60.16 17.80 54.69 59.28 50.37 30.40 51.58 49.92 41.33 82.55 28 E8_Aa NovelBoundary 0 16.23 5.53 7.33 4.13 0.00 0.00 2.25 8.79 6.37 3.33 0.00 0.00 6.82 0.00 8.90 4.10 0.00 2.24 0.00 0.00 0.00 0.00 8.19 29 ER8a ExonRegion 0 6.69 17.28 13.20 8.12 10.26 9.33 13.70 41.82 48.99 38.50 38.64 30.70 50.63 55.73 24.43 41.34 36.04 50.82 25.26 53.24 44.00 57.02 98.91 30 E8_Da NovelBoundary 0 3.41 3.35 8.66 4.56 16.21 5.11 1.63 4.52 12.67 7.25 5.26 6.30 6.82 15.07 4.45 3.42 8.04 11.11 13.18 0.00 0.00 15.19 3.16 31 E8a_E9a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.26 1.74 0.00 2.37 0.00 0.00 2.30 0.00 0.00 0.00 1.95 0.00 0.00 0.00 0.00 0.00 32 E8a_E11a KnownJunction 0 10.59 16.71 9.70 9.66 12.31 19.65 13.87 51.01 51.45 37.63 46.43 24.31 81.16 36.44 19.90 25.46 26.37 36.64 16.47 44.10 30.95 59.70 70.34 33 ER9a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.66 0.00 0.18 1.34 0.00 0.36 0.50 0.00 0.00 0.00 0.00 0.00 0.08 0.00 0.00 0.23 34 I9 Intron 0 3.21 3.71 1.34 3.18 5.73 2.59 8.51 4.58 7.70 6.43 1.62 6.02 4.61 11.57 2.48 9.01 8.28 7.87 7.99 11.01 4.03 19.05 6.75 35 I9_SR1 SilentIntronRegion 0 2.73 2.62 1.44 3.63 4.78 2.75 7.67 4.97 7.77 5.62 1.24 7.16 4.54 11.36 1.65 7.65 6.61 5.52 5.92 9.13 2.99 18.48 5.67 36 I9_AR1 ActiveIntronRegion 0 4.55 6.73 1.07 1.98 8.37 2.15 10.87 3.52 7.55 8.68 2.64 2.94 4.85 12.24 4.77 12.78 12.90 14.36 13.69 16.21 6.88 20.76 9.77 37 E10_Aa NovelBoundary 0 6.59 14.34 1.33 6.63 11.88 11.58 8.79 3.94 10.56 7.55 2.53 6.00 13.31 19.54 10.75 20.51 3.46 18.53 8.56 28.70 5.68 28.11 6.57 38 ER10a ExonRegion 0 0.00 3.24 0.00 0.81 4.26 0.73 4.75 3.08 2.20 4.77 6.16 4.87 6.08 16.52 1.77 7.11 5.26 7.32 7.62 6.78 5.27 12.45 5.80 39 E10_Da NovelBoundary 0 10.67 3.03 9.70 9.56 18.34 0.00 12.28 2.55 5.67 9.89 2.68 12.30 14.28 6.59 4.45 0.00 7.85 12.19 19.20 20.52 8.28 12.00 0.00 40 I10 Intron 0 7.11 6.38 1.98 3.38 9.85 3.58 8.64 2.88 5.89 7.60 2.72 5.20 9.28 12.54 4.08 9.42 6.65 4.71 5.81 9.60 3.31 24.47 4.13 41 I10_SR1 SilentIntronRegion 0 7.12 6.38 1.99 3.38 9.86 3.58 8.65 2.89 5.90 7.61 2.72 5.21 9.29 12.56 4.09 9.43 6.66 4.71 5.82 9.61 3.32 24.50 4.14 42 E11_Aa NovelBoundary 0 29.26 11.31 4.29 2.80 19.52 10.33 19.83 5.75 9.61 11.68 4.79 0.00 6.17 11.77 4.45 7.95 12.81 11.07 16.28 7.93 5.81 19.04 0.00 43 ER11a ExonRegion 0 16.42 19.49 8.92 8.03 31.00 31.25 22.48 40.38 51.74 43.86 42.13 39.45 47.33 58.45 33.32 49.45 48.25 57.84 46.20 59.66 48.64 70.69 115.36 44 E11a_E12a KnownJunction 0 10.08 15.06 17.47 3.50 32.26 27.43 23.27 46.41 48.96 42.01 57.59 31.81 71.75 55.57 20.15 43.32 37.77 62.35 57.70 58.36 66.47 77.03 149.56 45 ER12a ExonRegion 0 9.48 17.17 14.10 7.29 11.18 20.96 21.29 45.31 60.64 52.68 61.11 36.45 59.57 57.80 24.29 56.42 49.41 79.53 48.68 79.97 71.28 91.16 137.30 46 E12a_E13a KnownJunction 0 14.45 21.38 28.77 5.79 19.10 5.11 22.08 41.77 74.13 58.61 70.12 37.06 80.68 72.11 23.61 77.76 43.57 117.60 60.05 127.90 59.49 144.45 188.14 47 E13_Aa NovelBoundary 1 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.13 0.00 18.46 0.00 0.00 0.00 0.00 0.00 2.28 0.00 6.07 0.00 0.00 0.00 48 ER13a ExonRegion 0 11.15 22.47 20.78 11.78 18.56 22.56 19.89 49.64 64.88 63.34 62.32 33.16 68.57 70.74 23.47 81.45 48.97 125.02 67.34 109.48 62.88 136.11 172.74 49 E13_Da KnownBoundary 0 20.52 39.99 10.53 14.38 19.61 38.27 37.71 41.85 60.47 65.22 60.75 65.42 59.25 60.86 22.25 71.43 51.52 85.48 74.83 89.74 79.57 84.32 130.52 50 E13a_E15b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 ER13b ExonRegion 0 12.33 20.18 10.13 11.05 9.53 26.32 22.00 22.49 50.33 38.50 39.36 28.21 33.71 44.21 21.87 48.50 51.94 71.70 38.85 69.49 69.74 70.38 114.82 52 E13_Db NovelBoundary 0 0.00 6.18 5.41 1.37 0.00 0.00 8.44 6.16 4.66 1.67 4.69 7.65 6.82 0.00 0.00 7.69 8.70 7.63 4.61 19.05 2.66 0.00 19.63 53 E13b_E14a KnownJunction 0 7.56 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.81 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 54 E13b_E15a KnownJunction 0 39.78 15.79 18.39 6.59 4.24 2.84 12.90 15.32 52.43 38.25 31.59 11.40 51.46 61.16 24.48 48.96 31.79 74.04 44.42 91.27 51.95 127.61 162.19 55 I13_SR1 SilentIntronRegion 0 0.46 2.77 0.66 0.31 3.06 1.75 6.00 2.95 2.09 1.47 3.40 13.90 4.00 3.46 0.00 5.20 3.49 1.84 1.33 7.76 0.98 3.48 5.18 56 ER14a ExonRegion 0 2.19 1.19 0.07 1.19 0.00 2.15 8.54 1.63 0.00 0.00 2.24 6.27 2.26 3.14 0.53 0.00 3.87 0.00 0.00 3.77 1.29 1.20 1.96 57 E14_Da NovelBoundary 0 2.96 0.00 0.00 0.00 12.99 0.00 3.93 3.29 3.36 3.22 9.90 0.00 0.00 2.35 0.00 11.71 7.48 0.00 18.73 9.01 0.00 3.06 3.16 58 ER15a ExonRegion 0 13.82 6.78 22.50 7.23 9.51 11.46 13.64 18.87 55.68 53.55 35.81 15.75 34.91 59.05 22.08 47.47 30.07 99.06 39.55 61.05 36.91 102.96 117.71 59 E15_Ab KnownBoundary 0 6.67 5.59 30.25 11.69 14.60 27.71 18.72 23.29 64.55 67.77 40.59 24.01 31.98 53.56 13.35 58.70 30.20 104.05 48.57 63.15 30.21 101.71 120.70 60 ER15b ExonRegion 0 11.88 9.87 10.70 7.28 6.00 14.41 15.32 16.74 55.10 37.19 38.24 20.18 29.89 51.02 16.73 38.11 40.11 69.70 34.18 56.28 42.02 64.52 76.27 61 E15_Da KnownBoundary 0 10.30 39.99 5.56 8.79 10.87 17.60 14.40 33.43 49.42 43.46 49.80 36.61 20.94 45.32 10.75 63.83 38.24 90.45 34.26 37.78 24.83 67.42 89.20 62 ER15c ExonRegion 0 35.16 41.31 25.80 16.81 28.21 26.07 28.03 42.42 52.22 50.91 39.39 21.39 35.21 49.60 31.50 47.77 31.34 48.41 35.25 48.90 40.11 81.90 94.61