Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 WDR55 Gene 0 68.94 46.86 50.13 50.31 52.73 52.56 43.67 53.32 48.51 58.33 103.82 52.14 46.24 126.75 123.24 116.23 91.48 76.74 63.39 41.77 76.81 71.38 80.28 2 403979 Transcript 0 2.27 0.33 0.49 0.99 1.17 8.02 4.80 1.32 0.57 1.19 4.41 0.00 0.64 2.89 7.36 2.81 6.90 1.76 2.66 1.28 2.28 0.83 4.30 3 358337 Transcript 0 63.74 45.55 58.97 45.14 43.87 47.11 36.34 54.61 59.57 60.99 115.17 56.25 49.44 165.73 136.23 120.11 92.53 79.83 64.92 42.56 96.42 71.88 75.69 4 ER1a ExonRegion 0 4.54 0.67 0.98 1.98 2.34 16.04 9.60 2.64 1.15 2.38 8.82 0.00 1.28 5.79 14.72 5.62 13.80 3.53 5.33 2.55 4.57 1.67 8.60 5 E1_Ab KnownBoundary 0 21.11 3.16 1.83 8.49 15.53 80.18 36.35 6.65 4.63 12.33 26.16 0.00 6.17 22.07 45.74 26.57 42.26 27.15 9.51 9.01 14.02 2.39 40.89 6 ER1b ExonRegion 1 26.23 12.97 14.07 16.54 17.99 38.75 19.78 29.22 18.15 30.13 92.85 6.01 8.09 80.86 88.67 98.46 78.80 69.36 44.30 25.39 81.71 31.05 62.27 7 E1_Da NovelBoundary 1 0.00 0.00 6.42 9.92 0.00 0.00 3.67 7.93 5.61 11.23 0.00 0.00 7.95 14.24 10.63 70.84 8.79 47.80 41.04 6.07 11.43 2.57 20.15 8 E1a_E2a KnownJunction 1 10.82 8.95 27.05 30.33 22.84 26.41 11.92 44.44 34.72 47.55 139.77 18.61 6.82 150.33 128.44 204.73 101.64 145.21 34.92 56.06 117.32 73.73 143.07 9 I1 Intron 0 18.56 10.22 8.64 10.47 14.93 15.64 13.55 12.05 11.05 16.63 14.43 21.11 21.81 23.10 17.05 33.89 19.74 16.80 20.74 9.22 14.99 15.56 20.91 10 I1_SR1 SilentIntronRegion 0 11.71 4.50 6.87 9.21 5.92 21.30 8.93 9.12 11.00 16.63 9.20 9.13 9.68 25.78 20.69 55.24 25.93 16.77 35.24 6.12 15.85 17.29 35.41 11 I1_AR1 ActiveIntronRegion 0 20.76 12.04 9.21 10.88 17.81 13.87 15.03 12.99 11.09 16.65 16.11 24.94 25.68 22.29 15.93 27.17 17.81 16.83 16.18 10.21 14.73 15.03 16.35 12 E2_Aa NovelBoundary 1 13.63 6.05 12.80 9.96 20.37 12.15 18.02 15.98 7.90 16.14 9.84 41.11 26.95 14.60 14.71 19.05 4.77 27.77 17.51 15.08 16.99 8.33 12.98 13 ER2a ExonRegion 0 32.48 22.95 31.33 30.77 29.46 61.35 31.47 35.36 37.13 48.65 136.36 41.67 45.74 160.48 130.07 196.72 111.97 135.34 80.11 48.30 126.29 102.26 139.07 14 E2_Da NovelBoundary 0 33.86 12.70 39.21 18.78 22.75 31.69 48.31 24.85 27.29 25.84 24.59 26.11 0.00 24.19 24.11 40.33 24.78 41.37 8.56 18.54 40.03 14.51 26.72 15 E2a_E3a KnownJunction 1 28.45 20.33 15.23 27.10 18.25 90.29 35.02 40.05 30.21 41.64 133.30 24.61 55.19 131.03 148.09 112.02 90.79 67.07 62.03 50.11 80.25 78.50 68.46 16 I2 Intron 1 6.75 6.48 2.33 0.00 10.23 14.03 6.75 4.93 1.17 0.00 13.55 11.36 9.85 11.15 35.79 26.53 6.31 0.00 8.12 8.14 21.07 6.64 3.74 17 I2_AR1 ActiveIntronRegion 1 6.92 6.62 2.36 0.00 10.50 14.29 6.93 5.03 1.19 0.00 13.88 11.66 10.04 11.43 36.71 27.17 6.47 0.00 8.33 8.35 21.61 6.81 3.84 18 E3_Aa NovelBoundary 0 19.63 15.33 28.36 19.38 24.70 14.42 29.63 34.34 34.78 30.11 26.48 0.00 12.66 50.86 53.77 73.23 47.78 68.94 31.62 28.06 65.42 25.23 19.72 19 ER3a ExonRegion 0 32.85 31.34 49.86 47.45 26.06 76.56 51.17 58.26 62.29 52.98 182.97 52.99 62.36 192.96 134.51 172.92 172.36 108.43 73.55 65.43 153.63 86.70 100.98 20 E3_Da NovelBoundary 0 25.19 5.85 1.27 5.69 4.33 5.62 8.52 17.79 2.95 15.71 17.21 0.00 13.64 33.43 17.80 40.07 25.43 32.38 14.21 22.43 16.68 20.15 22.11 21 E3a_E4a KnownJunction 0 56.38 50.19 84.62 63.06 19.95 74.28 49.15 64.69 80.21 43.52 121.66 113.29 67.69 191.36 127.70 174.06 169.61 111.26 72.19 91.08 145.92 118.49 88.61 22 I3 Intron 0 4.95 1.90 2.56 0.95 1.25 5.15 5.58 2.41 6.03 0.80 7.24 3.42 4.00 13.77 19.40 26.42 13.90 7.31 8.94 6.97 6.19 5.85 9.62 23 I3_SR2 SilentIntronRegion 0 6.21 2.43 2.72 0.81 0.83 4.60 5.74 2.67 7.19 0.67 9.19 3.82 5.66 14.89 21.02 29.76 18.48 7.34 11.71 6.88 8.50 7.85 11.29 24 E4_Aa NovelBoundary 0 6.82 11.25 7.54 0.00 7.05 18.34 8.92 16.92 7.52 14.21 2.68 18.91 6.66 22.31 10.26 58.19 20.76 6.18 16.57 2.75 9.33 3.12 7.00 25 ER4a ExonRegion 0 49.55 41.52 71.45 59.35 30.40 55.22 45.71 67.27 75.43 71.24 144.38 85.56 63.52 235.58 158.78 190.46 168.29 120.64 82.93 72.66 150.51 127.71 107.73 26 E4a_E5a KnownJunction 0 60.46 33.88 65.70 65.36 42.02 57.69 68.05 115.46 79.63 88.48 162.67 85.53 75.00 223.32 201.37 212.34 104.44 112.92 83.11 33.62 139.37 115.30 97.31 27 ER5a ExonRegion 0 32.45 26.46 52.46 52.96 32.72 42.76 42.34 68.55 65.33 75.26 143.19 93.65 43.76 233.99 179.50 171.49 151.58 78.49 84.95 59.72 134.84 124.03 110.07 28 E5_Da NovelBoundary 0 26.60 11.12 29.98 28.97 49.58 36.80 25.35 34.05 36.63 35.91 45.43 25.06 21.91 57.63 33.01 85.53 83.87 67.53 30.97 21.28 43.92 22.11 15.79 29 E5a_E6a KnownJunction 0 13.19 23.81 35.07 59.07 20.03 37.59 31.49 32.86 40.34 69.65 141.46 79.08 34.41 230.03 127.70 101.60 128.94 107.41 35.48 58.80 96.99 70.91 91.59 30 I5 Intron 1 9.81 8.25 3.17 3.53 9.30 13.82 6.14 1.49 2.13 6.93 25.76 4.13 17.59 46.45 30.76 31.00 15.30 18.12 12.92 7.40 20.43 26.56 22.12 31 I5_AR1 ActiveIntronRegion 1 10.04 8.44 3.25 3.58 9.49 14.14 6.28 1.53 2.18 7.09 26.34 4.23 18.00 47.53 31.44 31.73 15.66 18.54 13.15 7.57 20.91 27.13 22.64 32 E6_Aa NovelBoundary 1 25.19 20.85 25.37 33.16 4.07 24.70 29.10 42.43 41.72 20.09 57.70 23.86 37.82 83.29 24.72 81.09 63.96 63.96 12.99 33.24 48.37 45.74 46.35 33 ER6a ExonRegion 0 51.82 41.01 55.06 57.83 42.97 61.92 42.27 58.30 76.90 74.10 172.07 70.62 55.70 241.18 192.63 179.39 141.36 123.59 80.51 56.71 134.97 120.62 131.61 34 E6a_E7a KnownJunction 0 73.12 66.30 66.62 72.65 52.21 66.55 67.97 59.97 69.30 92.81 181.31 62.27 96.42 276.00 173.06 207.13 155.21 136.59 78.97 39.37 152.59 126.63 91.34 35 ER7a ExonRegion 0 42.39 32.11 47.81 44.82 26.68 48.53 45.54 32.77 54.80 53.86 139.33 55.66 63.61 206.59 157.03 151.49 113.74 93.51 52.88 44.86 110.00 104.30 113.77 36 E7_Da KnownBoundary 0 46.60 20.85 58.93 39.22 27.08 39.41 33.48 19.30 53.53 54.77 147.56 58.52 40.91 192.36 129.06 108.43 78.35 101.27 52.80 42.76 145.18 67.85 76.06 37 E7a_E7b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 38 ER7b ExonRegion 0 45.75 36.93 65.06 36.05 24.69 41.18 25.70 53.42 72.06 62.22 138.25 60.22 51.06 227.38 156.47 139.08 106.00 91.30 67.47 45.74 132.92 79.84 78.82 39 E7_Ab KnownBoundary 0 61.05 51.57 58.60 46.35 29.46 52.87 38.69 70.77 71.38 67.56 95.50 60.02 59.09 259.11 162.31 186.19 122.49 122.25 82.64 35.92 126.95 89.77 98.94 40 ER7c ExonRegion 0 55.48 51.49 59.50 56.06 36.04 66.93 39.84 61.31 65.27 76.22 140.25 66.71 41.78 273.89 190.34 196.57 117.73 109.19 72.01 39.17 127.11 112.00 113.37 41 E7_Db KnownBoundary 1 96.02 59.99 72.35 76.28 78.86 108.35 54.85 63.09 68.49 90.39 262.65 48.62 58.92 362.18 211.88 303.85 140.81 143.01 106.92 48.00 126.58 157.13 82.46 42 ER7d ExonRegion 0 81.74 54.18 52.88 54.23 63.06 53.04 46.98 55.80 47.08 59.76 92.10 52.28 47.83 104.09 115.98 101.14 79.05 68.37 62.37 39.37 59.92 63.93 72.56