Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 PDGFRB Gene 0 141.21 53.03 385.22 157.37 117.29 88.86 77.61 198.02 152.11 226.85 0.76 4.91 9.52 4.63 0.93 0.56 8.57 216.72 175.49 35.70 1734.92 3306.72 2250.76 2 261799 Transcript 0 81.43 41.76 311.06 130.14 86.71 88.39 63.02 185.87 169.25 231.81 0.73 6.50 14.35 4.44 0.69 0.36 8.12 244.62 187.72 39.32 1942.09 3296.32 2305.50 3 IG40_AR1 ActiveIntergenicRegion 0 0.00 0.00 0.60 0.00 0.00 0.00 0.00 1.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 6.76 10.05 12.01 4 ER1a ExonRegion 0 23.37 8.77 84.19 35.31 20.00 30.97 28.36 51.07 50.57 83.87 0.21 0.78 3.40 3.73 0.23 0.00 5.48 120.39 121.09 23.09 982.99 1541.80 1284.52 5 E1a_E2a KnownJunction 0 37.71 14.87 92.87 19.08 25.30 34.81 31.22 64.49 72.74 88.51 0.00 0.00 0.00 2.47 0.00 0.00 7.85 111.51 91.77 17.58 1433.11 1811.29 1177.41 6 E1a_E3a NovelJunction 0 2.82 0.00 14.69 6.23 0.00 2.27 2.08 6.37 1.79 3.76 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.22 7.91 2.62 76.30 115.06 76.23 7 ER2a ExonRegion 0 30.69 10.83 76.08 27.79 17.97 29.74 21.85 70.49 78.97 115.49 0.00 0.00 0.00 2.26 0.00 0.19 6.10 142.48 92.93 29.32 1373.25 1829.15 1251.52 8 E2a_E3a KnownJunction 0 46.45 15.85 78.32 44.32 19.10 32.31 31.49 86.87 83.82 141.40 0.00 0.00 0.00 5.24 0.00 0.00 3.65 187.87 86.97 43.40 1331.12 2052.91 1493.94 9 ER3a ExonRegion 0 43.17 17.04 157.13 66.06 46.07 47.48 48.09 101.86 117.77 167.03 1.52 1.12 7.31 4.07 0.00 0.91 7.79 212.55 164.30 38.02 1786.62 2809.06 2031.14 10 E3a_E4a KnownJunction 0 60.31 32.30 134.56 70.99 81.41 42.87 62.89 129.84 144.39 171.57 0.00 0.00 0.00 0.00 0.00 0.00 3.93 232.22 155.96 27.04 1897.92 2986.42 2055.89 11 ER4a ExonRegion 0 44.76 22.44 184.04 98.63 83.01 62.75 66.37 148.61 152.95 215.26 0.74 2.46 15.35 4.36 0.55 0.00 8.53 204.39 230.69 39.65 2058.63 3744.89 2344.21 12 E4a_E5a KnownJunction 0 35.71 30.52 224.59 115.94 82.26 93.64 56.09 164.26 162.27 238.21 0.00 11.70 47.40 4.65 0.00 0.00 4.39 276.54 264.48 37.71 1982.31 3896.47 2370.28 13 ER5a ExonRegion 0 58.02 30.15 192.46 102.70 87.02 92.66 70.78 148.90 162.28 206.67 0.36 5.11 13.56 3.17 0.00 0.00 8.20 257.26 242.71 44.12 1992.45 3448.16 2427.25 14 E5a_E6a KnownJunction 0 59.64 15.46 162.68 89.63 51.61 62.86 49.82 134.31 156.48 177.77 2.42 0.00 0.00 2.47 0.00 0.00 8.42 238.15 211.86 42.25 1815.27 3067.98 1831.29 15 ER6a ExonRegion 0 49.85 29.28 177.90 85.11 55.24 55.92 51.13 141.45 161.65 185.42 2.33 3.12 7.24 3.99 0.60 0.87 11.02 273.80 230.46 41.24 1928.30 3148.29 2312.14 16 E6a_E7a KnownJunction 0 27.12 19.01 168.77 69.29 75.13 49.86 42.88 126.43 144.36 137.61 2.68 0.00 7.47 2.12 0.00 0.00 8.88 165.07 201.04 34.13 1737.30 2490.73 1630.18 17 ER7a ExonRegion 0 41.90 23.01 190.62 83.57 43.14 58.48 48.17 124.81 131.65 161.24 1.22 3.77 6.97 3.49 0.54 0.79 10.50 226.39 159.71 30.27 1652.85 2480.47 2030.18 18 E7a_E8a KnownJunction 0 46.82 40.85 214.07 82.57 27.25 83.36 31.75 129.14 133.53 189.43 0.00 0.00 0.00 7.36 0.00 0.00 0.00 192.97 94.31 23.78 1379.18 2115.62 1853.83 19 E8_Aa NovelBoundary 0 0.00 0.00 6.09 1.90 0.00 0.00 1.72 4.19 2.89 2.98 0.00 13.95 0.00 0.00 0.00 0.00 0.00 3.73 0.00 0.00 12.60 6.25 20.66 20 ER8a ExonRegion 0 32.50 25.47 190.08 79.15 34.42 58.30 29.97 115.43 120.63 164.99 1.68 0.90 5.13 2.11 0.90 0.00 8.88 202.38 144.52 23.07 1651.15 2278.36 1747.38 21 E8a_E9a KnownJunction 0 39.93 54.14 201.06 91.40 41.34 62.07 36.43 126.18 124.88 193.84 0.00 6.30 0.00 0.00 0.00 0.00 3.83 206.15 140.33 27.16 1723.16 2285.11 1940.30 22 ER9a ExonRegion 0 29.90 27.63 159.19 59.91 36.88 57.68 45.27 96.07 107.53 142.72 1.61 5.69 6.81 5.97 1.26 0.00 7.93 151.71 131.32 29.89 1431.31 2083.42 1684.64 23 E9a_E10a KnownJunction 0 34.30 41.51 225.24 99.99 96.43 61.04 64.21 117.18 136.46 165.20 0.00 18.91 20.45 2.35 4.45 0.00 0.00 270.90 219.21 37.78 1719.88 2994.07 2439.17 24 ER10a ExonRegion 0 33.84 25.07 188.75 82.10 45.59 46.94 41.58 119.43 119.90 180.89 0.46 3.35 6.48 2.18 1.72 0.00 5.90 222.21 142.85 39.55 1451.59 2507.41 1862.36 25 E10a_E11a KnownJunction 0 39.27 40.12 195.17 82.04 54.67 73.03 36.57 152.96 125.95 205.28 0.00 24.31 15.10 0.00 0.00 0.00 4.77 243.66 135.53 44.04 1704.01 2645.59 1949.27 26 I10_AR1 ActiveIntronRegion 0 21.40 11.89 56.34 32.89 18.46 12.66 20.45 39.38 31.06 22.36 0.00 1.46 2.70 1.95 0.48 0.00 3.56 32.72 43.17 9.83 108.92 366.69 320.88 27 I10_AR2 ActiveIntronRegion 0 28.93 18.30 68.21 47.02 45.93 23.84 28.02 36.87 36.64 29.05 0.00 4.33 1.56 6.50 2.90 0.00 6.60 33.26 49.37 11.35 131.49 545.88 476.72 28 I10_SR2 SilentIntronRegion 0 25.49 12.11 64.73 43.43 37.23 17.38 22.33 35.25 32.06 26.23 0.00 2.07 6.53 5.37 2.90 0.00 1.00 29.48 33.24 13.23 107.89 491.89 474.46 29 I10_AR3 ActiveIntronRegion 0 22.53 5.45 51.44 38.88 20.26 9.62 17.67 35.03 22.65 27.88 0.00 4.19 3.70 0.40 0.03 0.00 2.96 32.23 38.09 9.37 91.88 281.62 332.60 30 ER11a ExonRegion 0 56.30 22.11 206.34 70.40 67.60 75.49 61.43 137.40 127.41 212.36 0.24 4.79 2.12 2.36 1.10 0.00 6.05 218.52 141.77 53.24 1739.58 2900.94 2090.40 31 E11a_E12a KnownJunction 0 59.34 14.73 220.87 72.82 80.39 84.50 73.58 132.46 131.60 225.64 2.26 0.00 0.00 4.94 0.00 0.00 3.46 176.55 170.26 36.75 1800.56 2607.93 1873.89 32 ER12a ExonRegion 0 54.73 26.67 230.89 83.33 61.40 64.35 61.77 139.35 134.33 202.29 0.64 1.53 10.97 3.93 0.00 2.15 6.60 196.19 143.77 34.79 1724.33 2741.58 1922.55 33 E12a_E13a KnownJunction 0 42.60 29.34 266.76 83.44 27.59 70.81 42.40 153.86 135.99 191.93 0.00 11.55 20.29 11.95 0.00 0.00 3.55 249.30 108.14 45.76 1740.76 2348.30 1650.24 34 ER13a ExonRegion 0 48.32 24.36 269.87 106.73 43.32 54.93 32.71 136.98 133.96 182.62 3.17 9.32 20.68 6.71 1.41 0.17 5.44 156.37 152.93 32.87 1723.17 3130.14 2051.82 35 E13a_E14a KnownJunction 0 97.28 41.44 373.79 172.14 95.84 81.26 64.52 195.10 203.76 216.05 2.68 5.70 13.64 4.94 0.00 0.00 12.72 219.87 199.25 51.96 2084.18 3593.92 2429.95 36 ER14a ExonRegion 0 48.30 36.15 264.13 118.42 102.50 107.22 71.24 156.64 162.83 202.93 1.36 8.81 13.94 8.81 1.75 2.68 9.90 215.34 148.56 32.14 1987.03 2775.64 2053.98 37 E14a_E15a KnownJunction 0 64.75 25.13 261.17 108.31 132.43 105.62 54.06 162.00 137.87 225.83 0.00 0.00 6.82 4.53 6.30 0.00 9.54 159.68 134.97 29.91 1611.83 2590.05 1924.77 38 ER15a ExonRegion 0 66.84 34.46 297.90 136.83 65.36 63.98 44.92 174.82 164.85 226.03 1.23 2.98 19.79 4.69 0.47 0.98 7.90 184.42 192.40 35.73 1900.30 3322.04 2146.56 39 E15a_E16a KnownJunction 0 66.53 27.36 359.24 104.98 51.61 52.70 40.89 162.45 136.31 215.19 0.00 6.00 27.11 7.59 0.00 0.00 16.46 150.93 188.43 22.88 1954.51 2361.04 1816.53 40 ER16a ExonRegion 0 119.39 49.70 360.42 168.58 111.53 103.33 76.08 235.93 201.96 278.26 0.00 10.57 22.17 6.21 1.57 0.94 15.17 202.06 215.14 42.24 2095.59 3707.82 2477.43 41 E16a_E17a KnownJunction 0 289.68 98.07 470.83 239.23 134.38 110.79 91.64 281.56 235.47 322.02 0.00 5.40 54.38 12.71 0.00 0.00 7.85 270.23 211.02 43.27 2140.34 3851.95 2888.09 42 ER17a ExonRegion 0 201.69 76.56 459.64 210.15 95.09 85.42 73.79 272.47 238.20 294.47 0.00 14.44 25.34 5.05 0.88 0.00 10.73 318.76 204.40 52.12 2503.15 4496.92 2787.71 43 E17a_E18a KnownJunction 0 133.58 109.98 562.78 271.73 117.57 131.40 107.67 278.07 269.44 293.60 0.00 11.85 37.17 2.77 0.00 0.00 4.77 291.29 271.16 64.49 2575.87 4859.12 2850.79 44 ER18a ExonRegion 0 91.51 59.09 568.17 284.20 187.15 186.06 122.47 328.74 276.79 344.54 0.80 8.80 22.08 4.21 1.20 0.00 10.33 348.49 238.25 51.31 2749.28 4988.35 3145.43 45 E18a_E19a KnownJunction 0 123.87 55.98 595.13 272.73 239.90 171.55 109.88 325.84 280.41 330.27 0.00 41.86 18.99 4.41 0.00 4.10 21.32 343.86 254.88 58.23 2620.47 5506.36 3686.32 46 ER19a ExonRegion 0 85.38 47.75 573.19 253.61 120.89 105.31 67.59 315.71 286.52 395.00 0.26 8.97 20.98 5.52 0.93 0.00 6.40 367.21 277.58 55.68 2410.05 5781.95 3787.95 47 E19a_E20a KnownJunction 0 89.13 94.92 664.47 235.04 130.14 179.27 60.72 340.01 271.03 368.92 2.42 0.00 40.26 5.12 0.00 0.00 13.09 348.79 291.02 44.87 3665.62 3945.89 3193.09 48 ER20a ExonRegion 0 95.33 67.09 477.12 194.09 140.29 118.10 78.68 286.15 236.18 330.46 0.70 13.98 28.09 3.22 0.93 1.49 6.21 363.40 220.68 45.30 2476.70 4117.14 2799.35 49 E20a_E21a KnownJunction 0 104.76 75.91 529.96 222.78 133.02 152.30 105.11 435.18 363.19 466.62 0.00 5.40 14.28 2.47 0.00 0.00 4.77 600.66 177.42 60.34 2118.47 3893.16 2616.98 50 ER21a ExonRegion 0 301.44 95.87 461.79 166.61 213.55 232.17 138.12 274.04 237.14 336.00 0.93 8.09 26.10 7.54 2.08 0.03 16.38 384.42 323.19 50.14 2850.46 6060.56 4566.73 51 E21a_E22a KnownJunction 0 147.95 67.49 582.45 204.57 172.16 160.36 84.53 344.20 233.36 353.93 0.00 6.30 19.97 2.47 0.00 0.00 13.28 330.26 307.11 43.14 2556.35 4546.53 3330.19 52 ER22a ExonRegion 0 128.24 47.12 479.08 160.76 96.65 102.38 71.80 240.30 176.70 301.98 0.42 7.17 12.86 6.02 0.91 0.00 14.59 259.45 203.51 39.10 2145.10 3761.86 2652.20 53 E22a_E23a KnownJunction 0 66.16 39.27 559.92 191.35 63.24 128.62 93.98 238.35 195.19 323.69 0.00 6.30 0.00 4.47 0.00 0.00 4.77 309.08 246.78 37.39 1629.07 4655.89 2988.22 54 ER23a ExonRegion 0 265.90 88.45 604.07 237.93 194.33 112.78 111.63 266.72 156.81 258.51 0.56 5.08 4.96 4.96 1.23 0.72 8.17 204.05 162.77 32.58 1558.95 3572.20 2299.33 55 IG39 Intergenic 0 1.33 0.00 0.46 1.02 1.34 0.23 0.17 0.00 0.69 1.93 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.20 0.00 4.14 10.70 14.35 56 IG39_AR3 ActiveIntergenicRegion 0 2.70 0.00 0.00 0.00 3.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.03 0.00 0.00 14.61 16.85 57 IG39_AR2 ActiveIntergenicRegion 0 0.00 0.00 0.00 0.96 0.00 0.00 0.00 0.00 0.96 1.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.64 0.00 0.59 3.81 10.24 58 IG39_AR1 ActiveIntergenicRegion 0 1.14 0.00 0.66 1.32 0.96 0.33 0.24 0.00 0.85 2.61 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.74 0.00 5.86 10.69 14.34