Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 HMGXB3 Gene 0 61.51 59.22 108.54 96.99 56.43 65.33 45.47 88.14 75.75 111.39 163.67 76.60 57.52 175.19 160.60 197.75 135.48 192.58 87.93 80.52 145.17 129.08 190.83 2 421549 Transcript 0 0.48 0.03 0.00 0.00 0.00 0.03 0.12 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.33 0.00 0.00 0.00 0.00 0.00 0.20 1.33 0.82 3 261804 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.29 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.59 5 ER2a ExonRegion 0 0.97 0.07 0.00 0.00 0.00 0.06 0.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.36 0.00 0.00 0.00 0.00 0.00 0.40 2.66 1.05 6 E2_Ab KnownBoundary 0 6.89 2.57 1.33 0.00 0.00 4.94 0.00 1.60 1.16 1.67 4.05 0.00 0.00 0.00 0.00 0.00 4.68 1.62 3.67 0.00 10.75 0.00 0.00 7 ER2b ExonRegion 0 3.63 10.84 5.85 3.62 2.87 6.89 4.82 5.68 8.04 10.32 14.38 2.32 3.43 28.03 13.89 25.34 12.15 18.13 5.26 13.03 18.35 10.24 16.86 8 E2a_E3a KnownJunction 0 35.86 54.60 36.90 18.81 20.20 19.76 7.46 26.90 43.58 51.04 69.18 26.41 13.15 89.29 53.16 123.04 66.39 97.25 25.60 50.75 76.48 26.27 82.20 9 ER3a ExonRegion 1 21.84 43.00 50.25 44.71 41.27 29.22 39.03 54.00 81.65 93.98 146.80 110.04 92.32 186.00 74.43 193.62 129.80 139.78 60.82 90.78 96.60 131.65 160.67 10 E3a_E4a KnownJunction 0 23.49 45.98 75.57 58.53 62.14 56.56 78.74 85.56 116.87 145.16 180.36 188.31 179.86 239.45 155.88 250.28 146.33 225.17 99.86 147.71 113.55 212.42 284.43 11 ER4a ExonRegion 1 14.80 46.60 45.32 46.96 21.24 42.86 40.01 58.99 79.37 102.71 203.61 203.76 140.49 198.98 79.74 220.36 155.69 190.42 104.68 96.17 138.44 174.74 204.93 12 E4a_E5a KnownJunction 1 40.97 47.03 54.61 46.35 39.13 23.85 25.04 84.41 82.49 113.65 224.37 267.69 193.98 255.93 101.49 278.05 166.25 246.23 123.20 139.98 131.71 198.46 251.74 13 E4a_E6a NovelJunction 0 0.00 0.00 0.00 2.06 0.00 0.00 0.00 2.18 0.00 0.00 14.95 0.00 13.64 5.00 6.30 3.85 12.34 0.00 0.00 3.07 6.30 8.33 30.82 14 E4a_E7a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 4.24 1.93 0.00 2.90 2.58 18.46 0.00 2.47 4.82 0.00 13.93 2.20 4.05 3.26 7.54 8.76 7.51 15 ER5a ExonRegion 0 15.90 31.31 50.34 41.71 29.21 44.72 35.99 61.35 64.76 88.74 173.90 98.53 90.04 200.11 100.49 211.88 150.87 230.60 101.80 96.26 186.37 130.33 201.91 16 E5a_E6a KnownJunction 0 41.56 12.43 57.54 27.80 71.39 109.14 36.08 53.27 75.55 92.35 213.00 93.93 117.69 239.57 107.30 270.10 181.49 203.87 160.19 110.38 188.92 171.88 195.65 17 E6_Aa NovelBoundary 0 32.30 3.09 3.31 6.99 8.66 0.00 25.48 2.55 1.39 4.84 5.37 13.80 0.00 0.00 0.00 4.19 13.00 4.15 0.00 5.82 12.29 3.12 0.00 18 ER6a ExonRegion 0 23.54 24.55 42.67 35.35 40.51 62.24 32.06 80.87 87.04 90.80 176.38 105.96 94.51 226.41 103.65 265.54 193.19 230.60 111.42 103.59 184.58 174.11 253.80 19 E6a_E7a KnownJunction 1 38.30 52.95 46.12 29.87 43.21 91.77 29.37 52.66 60.18 64.44 114.24 97.68 107.46 232.68 86.28 215.16 162.97 127.14 93.18 71.20 163.59 136.43 206.66 20 ER7a ExonRegion 1 25.25 53.95 43.88 29.04 41.70 55.43 44.88 48.65 57.02 66.02 146.94 111.71 78.70 181.31 78.58 211.88 145.56 153.41 84.70 69.83 149.55 106.18 203.96 21 E7a_E8a KnownJunction 1 37.78 31.77 47.63 27.60 23.51 58.43 48.84 32.49 56.48 54.05 126.93 100.68 121.42 171.76 58.47 168.25 138.20 117.89 139.49 41.35 145.55 131.35 167.99 22 I7 Intron 0 8.37 12.72 4.44 15.40 8.24 5.35 14.80 12.94 13.71 12.18 7.58 20.44 21.63 6.50 6.24 7.41 12.83 8.40 4.85 21.09 4.00 7.36 15.13 23 I7_SR1 SilentIntronRegion 0 9.17 17.35 3.62 15.24 4.82 3.92 13.03 11.48 13.73 13.85 7.09 23.71 25.53 6.66 6.08 7.68 14.21 7.81 3.38 22.06 3.50 6.67 12.71 24 I7_AR3 ActiveIntronRegion 0 7.96 4.98 6.22 19.39 11.93 7.81 17.93 22.12 17.41 14.26 10.40 22.66 19.52 8.18 9.89 7.28 14.34 11.46 11.59 26.38 6.89 10.44 23.70 25 I7_SR2 SilentIntronRegion 0 9.23 12.97 5.00 16.23 13.68 7.67 17.54 11.05 13.82 10.07 8.00 15.95 18.75 5.36 4.84 9.05 11.71 8.23 2.75 17.69 2.31 7.30 15.18 26 E8_Aa NovelBoundary 1 9.11 24.40 7.27 9.76 19.10 2.50 17.71 7.11 14.96 21.11 2.37 24.61 26.46 0.00 10.38 11.19 0.00 16.83 4.05 12.02 2.59 3.00 11.01 27 ER8a ExonRegion 0 18.92 50.99 73.69 68.51 46.02 49.23 52.14 64.70 71.81 95.89 166.91 86.45 65.96 210.59 98.01 199.42 165.42 205.36 92.42 82.85 160.18 135.75 212.38 28 E8_Da NovelBoundary 0 14.30 3.35 6.65 11.45 3.82 0.00 23.49 12.53 9.64 15.77 7.26 0.00 0.00 0.00 4.94 11.54 8.32 9.62 0.00 17.39 11.37 0.00 19.63 29 E8a_E9a KnownJunction 1 19.56 59.13 76.82 61.23 22.92 48.44 45.13 68.88 69.65 98.61 125.19 43.81 27.11 190.36 73.31 148.34 159.70 205.65 66.64 90.95 120.96 126.75 226.55 30 ER9a ExonRegion 0 24.40 58.40 64.19 48.82 32.03 60.21 43.26 47.19 68.82 88.23 141.43 66.29 62.20 196.58 113.64 182.55 123.20 184.32 62.08 79.68 136.58 113.28 175.28 31 E9a_E10a KnownJunction 0 20.08 75.78 72.29 62.80 59.17 74.56 38.64 53.07 70.51 104.76 143.35 110.89 73.21 243.86 159.96 233.19 107.71 218.17 70.21 97.60 162.29 103.36 261.04 32 ER10a ExonRegion 0 20.17 54.64 63.68 41.99 53.11 57.24 41.73 54.22 73.09 92.04 145.32 72.41 37.95 187.59 110.37 193.19 127.89 162.98 52.92 77.12 154.93 81.55 165.02 33 E10_Da NovelBoundary 0 6.22 15.13 11.56 22.27 19.78 40.43 42.53 37.05 24.42 28.31 44.75 12.00 14.61 62.63 27.69 75.54 21.69 63.22 24.19 40.08 58.94 18.43 29.71 34 E10a_E11a KnownJunction 0 13.78 21.58 74.45 24.24 23.01 45.14 25.53 29.61 56.83 72.07 93.87 43.96 20.45 101.65 111.63 133.64 102.57 138.45 34.64 43.72 104.96 63.44 153.23 35 I10 Intron 0 12.20 23.44 5.18 15.67 20.17 17.73 24.07 21.93 16.49 20.92 29.14 48.15 39.73 43.33 23.04 44.55 21.95 22.18 18.93 28.31 16.02 29.74 33.86 36 I10_SR1 SilentIntronRegion 0 12.22 23.49 5.19 15.70 20.21 17.76 24.11 21.97 16.52 20.96 29.19 48.24 39.79 43.40 23.08 44.63 21.98 22.22 18.96 28.35 16.05 29.79 33.90 37 I10 Intron 0 37.99 63.70 17.61 55.02 58.91 36.80 43.84 49.10 37.65 41.53 65.07 102.64 66.17 60.97 27.88 79.19 57.04 43.85 33.02 40.44 36.95 48.54 51.89 38 I10_SR1 SilentIntronRegion 0 26.88 60.89 13.57 43.20 46.96 29.16 40.87 28.47 31.73 31.95 57.27 94.20 69.67 52.30 24.30 53.70 51.46 20.88 27.31 33.84 29.10 42.80 36.99 39 I10_AR1 ActiveIntronRegion 1 9.17 21.69 7.35 17.72 26.76 4.28 10.15 27.66 8.23 17.59 19.33 33.19 6.25 16.24 3.87 30.71 20.91 6.78 20.17 17.02 11.02 12.50 5.87 40 I10_AR2 ActiveIntronRegion 0 51.68 67.78 22.59 69.72 73.74 46.38 47.91 74.12 45.16 53.40 75.12 113.85 62.89 72.01 32.50 110.38 64.31 71.73 40.14 48.74 46.72 55.96 70.32 41 E11_Aa NovelBoundary 1 76.01 121.29 31.05 98.19 97.45 65.87 68.45 86.75 70.75 58.61 80.23 175.11 80.51 83.88 88.63 172.26 100.70 138.79 45.46 49.60 61.22 69.07 89.29 42 ER11a ExonRegion 0 77.09 87.75 97.86 95.24 63.57 82.11 57.21 127.61 97.06 125.58 222.85 130.41 87.64 224.37 153.88 238.37 174.38 186.47 89.54 91.77 162.76 145.70 228.14 43 E11a_E12a KnownJunction 0 138.47 123.93 173.06 179.80 82.94 135.77 73.84 162.90 147.54 170.14 265.70 176.91 114.77 227.15 175.29 293.09 210.75 250.01 110.03 102.14 183.48 185.84 275.21 44 ER12a ExonRegion 0 96.74 81.80 155.35 150.80 100.80 113.45 70.64 143.77 122.50 167.35 261.95 132.11 78.39 257.49 185.97 298.84 219.14 239.32 132.64 106.64 188.62 173.61 270.52 45 E12_Da NovelBoundary 0 0.00 0.00 1.18 1.86 6.96 0.00 24.29 2.09 1.77 4.81 2.42 6.90 0.00 0.00 0.00 15.38 4.30 1.74 0.00 5.69 0.00 5.94 3.93 46 E12a_E13a KnownJunction 0 90.61 103.60 115.79 157.59 93.72 84.67 58.56 158.59 120.54 166.52 209.37 139.25 61.68 231.27 241.05 348.28 131.93 279.77 120.19 99.20 176.19 159.70 323.95 47 E12a_E15a NovelJunction 0 2.82 11.58 12.68 12.35 0.00 5.11 8.30 6.37 10.79 2.98 4.95 5.85 0.00 6.83 22.25 16.49 4.49 8.17 3.95 6.20 4.94 2.82 4.35 48 ER13a ExonRegion 0 63.19 87.17 107.84 121.27 81.78 95.50 62.82 122.35 92.45 147.04 216.50 102.52 61.22 210.39 160.71 243.64 160.96 262.72 123.64 91.79 192.50 167.97 255.27 49 E13_Da NovelBoundary 0 3.70 5.85 0.00 5.39 11.97 0.00 19.25 13.55 8.85 6.82 2.68 5.40 12.99 2.47 5.19 24.01 8.23 8.21 0.00 24.74 5.44 2.45 19.55 50 E13a_E14a KnownJunction 0 110.02 89.72 97.39 94.69 86.67 88.59 72.03 105.72 73.49 117.28 207.11 90.48 49.35 192.48 181.59 211.23 116.88 141.36 106.07 51.58 174.27 156.39 146.31 51 I13 Intron 0 6.20 2.98 4.93 6.40 3.61 4.95 6.11 5.22 7.05 9.62 8.27 2.41 6.71 15.84 7.24 41.49 13.01 11.07 11.83 5.27 5.46 21.81 79.00 52 I13_SR1 SilentIntronRegion 0 6.22 2.99 4.96 6.43 3.63 4.98 6.14 5.24 7.08 9.66 8.31 2.42 6.74 15.91 7.28 41.68 13.06 11.12 11.89 5.29 5.48 21.91 79.35 53 E14_Aa NovelBoundary 0 31.04 9.08 6.00 10.39 7.13 5.11 18.06 4.23 2.72 5.53 4.47 5.55 18.34 23.72 4.45 18.80 9.26 7.63 0.00 11.19 21.93 5.69 23.30 54 ER14a ExonRegion 0 77.77 71.38 101.03 92.64 69.65 76.13 54.24 94.04 76.50 139.19 176.97 96.36 40.63 181.95 143.14 211.30 148.80 161.74 110.57 62.18 147.96 167.66 202.40 55 E14a_E15a KnownJunction 0 141.36 92.29 129.03 117.40 140.24 62.07 55.03 137.72 76.94 149.46 200.52 73.52 35.06 207.55 176.03 245.41 149.79 243.33 82.45 73.25 170.69 197.97 263.43 56 ER15a ExonRegion 0 89.87 105.30 133.95 146.15 108.81 101.89 90.13 117.22 85.87 150.48 222.33 120.27 57.31 228.47 202.21 251.73 181.35 226.35 109.29 87.62 180.05 168.37 230.59 57 E15a_E16a KnownJunction 0 81.94 97.29 139.82 133.58 102.46 134.70 81.08 132.79 86.20 159.37 163.46 84.48 26.13 161.34 162.06 187.90 159.89 241.51 79.34 107.00 166.12 147.63 252.93 58 ER16a ExonRegion 0 103.30 92.57 171.18 162.49 85.93 90.50 62.19 126.82 100.51 170.70 229.16 95.13 47.46 211.78 222.33 259.57 177.34 258.57 99.52 109.28 217.89 199.51 255.81 59 E16a_E17a KnownJunction 1 127.06 151.35 214.21 179.50 109.25 77.00 88.94 152.63 126.45 212.88 368.15 102.18 51.94 258.52 266.15 248.99 254.51 292.00 98.64 165.03 302.77 197.29 290.41 60 ER17a ExonRegion 0 115.72 101.97 216.61 199.60 130.26 112.88 74.24 139.82 116.93 182.63 251.52 92.22 73.04 232.55 250.64 298.23 211.60 290.93 105.25 116.94 222.98 199.95 260.79 61 E17a_E18a KnownJunction 0 142.69 111.10 212.88 235.00 63.58 140.60 68.98 201.67 146.76 235.39 236.48 72.62 52.11 189.24 310.16 299.15 258.63 262.69 133.09 108.34 235.12 255.59 246.10 62 ER18a ExonRegion 0 104.83 82.44 184.92 182.78 70.03 92.10 52.32 164.76 114.58 191.54 202.13 71.31 63.07 220.86 237.10 240.03 173.40 224.61 111.70 98.08 202.82 175.26 207.87 63 E18a_E19a KnownJunction 0 152.77 174.57 192.96 186.39 126.06 142.08 78.79 252.61 150.78 235.50 262.01 118.39 55.19 247.04 337.85 330.94 206.73 277.90 170.17 124.32 242.54 207.34 240.38 64 ER19a ExonRegion 0 110.93 115.24 199.68 206.04 112.91 149.02 90.07 185.77 116.57 197.48 243.66 104.39 115.85 244.31 296.62 337.68 179.43 336.20 140.37 104.20 215.79 197.06 315.48 65 E19a_E20a KnownJunction 0 93.57 97.48 212.06 152.83 85.48 117.43 53.26 164.30 87.56 166.46 224.16 109.99 128.73 209.43 244.89 242.84 141.56 246.73 133.75 108.15 211.77 161.90 195.57 66 ER20a ExonRegion 0 82.27 70.35 183.69 141.14 56.97 89.91 44.42 132.85 95.64 154.33 219.12 83.39 76.18 182.55 272.46 234.56 148.35 252.58 106.53 83.91 178.00 173.61 216.46 67 E20a_E21a KnownJunction 0 130.10 88.87 254.16 200.24 130.22 143.27 90.93 194.40 134.37 207.56 259.33 84.33 78.73 236.68 331.17 260.79 153.53 336.10 110.12 99.52 186.14 189.33 282.64 68 ER21a ExonRegion 0 109.99 70.18 170.63 143.20 71.20 77.00 48.80 113.09 88.05 130.87 167.96 53.41 42.03 176.45 257.92 206.62 134.01 211.98 100.72 90.44 141.43 130.23 209.07