Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TXNDC15 Gene 0 89.27 180.66 103.63 147.19 165.88 138.43 101.79 110.82 154.51 94.03 72.37 120.13 181.47 76.02 131.55 68.46 71.19 140.96 83.71 97.40 91.23 220.02 127.29 2 441965 Transcript 0 2.48 4.59 3.77 5.70 5.35 3.68 3.74 6.79 5.21 4.32 1.29 3.19 1.93 0.30 0.83 0.94 0.52 3.39 3.37 5.59 0.35 4.82 1.55 3 358387 Transcript 1 21.17 46.56 113.36 88.34 19.17 60.89 21.67 71.11 92.00 75.98 104.93 12.19 60.59 106.63 208.30 91.71 119.30 311.03 78.85 145.20 200.13 203.84 186.57 4 ER1a ExonRegion 0 0.56 0.60 1.01 1.32 2.28 4.75 3.54 0.00 5.09 0.44 0.28 0.00 0.00 0.00 0.00 0.00 0.00 0.22 0.00 0.31 0.00 0.43 0.00 5 E1_Ab KnownBoundary 0 2.89 0.00 1.57 3.70 3.99 17.60 14.09 2.55 15.13 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 2.32 9.13 0.00 0.00 0.00 0.00 6 ER1b ExonRegion 0 10.16 9.38 9.37 10.05 6.66 21.23 10.28 8.09 13.28 13.15 8.53 4.23 1.82 6.79 15.70 6.73 9.12 28.23 10.30 14.61 20.08 14.87 22.59 7 E1a_E2a KnownJunction 0 18.74 26.18 29.30 20.94 20.71 13.23 10.64 19.35 49.97 45.26 34.48 36.01 20.29 27.14 48.33 7.52 31.32 60.40 9.22 40.97 121.02 16.72 25.44 8 I1 Intron 0 15.58 20.07 15.00 16.25 15.79 7.81 16.25 19.98 42.30 11.85 5.00 16.93 28.91 11.96 25.31 19.30 13.46 41.63 10.76 31.23 18.53 11.31 25.02 9 I1_AR2 ActiveIntronRegion 0 3.00 7.21 13.63 13.76 6.74 5.21 13.35 6.32 15.64 6.78 0.00 11.38 18.82 13.31 20.24 21.83 11.86 14.60 4.92 30.81 22.09 10.24 19.69 10 I1_SR2 SilentIntronRegion 0 7.71 16.57 19.00 14.41 4.67 6.16 9.40 15.87 42.56 9.77 3.87 4.81 10.33 8.93 33.56 20.16 15.23 32.43 11.18 40.69 28.37 8.09 25.66 11 I1_SR3 SilentIntronRegion 0 15.89 17.60 12.38 14.79 16.97 6.04 18.22 16.38 32.37 8.64 4.52 16.43 26.01 8.73 22.08 20.31 12.32 41.07 9.97 27.20 15.56 9.25 24.41 12 I1_AR4 ActiveIntronRegion 0 28.33 22.11 20.42 21.88 26.84 9.16 21.86 41.55 68.30 22.81 5.97 34.55 64.64 13.18 26.74 25.50 19.35 48.65 18.56 34.70 21.44 13.35 38.34 13 I1_SR4 SilentIntronRegion 0 13.92 29.16 17.04 19.57 14.99 11.15 18.04 17.46 51.77 11.84 5.39 15.29 27.49 15.42 31.45 18.90 14.02 54.67 8.97 38.53 21.42 15.33 22.16 14 I1_AR5 ActiveIntronRegion 0 21.62 20.77 18.63 17.76 21.47 8.46 15.15 22.54 38.02 14.11 11.74 14.04 19.90 18.21 26.77 23.10 13.64 29.45 10.83 26.98 13.90 13.69 29.28 15 E2_Aa NovelBoundary 0 19.48 17.96 24.27 9.99 21.90 43.55 24.11 29.94 52.57 14.16 10.32 0.00 66.72 17.54 32.51 24.18 12.62 15.67 4.52 44.49 27.06 5.94 24.76 16 ER2a ExonRegion 1 15.54 36.41 61.42 35.52 19.82 39.77 16.84 37.59 57.43 58.46 77.50 15.02 34.30 46.49 74.98 36.22 103.98 119.30 31.65 79.39 181.67 75.98 48.73 17 E2_Da KnownBoundary 1 34.45 71.04 103.25 58.33 35.91 75.01 32.37 59.80 88.22 81.04 109.98 24.31 82.62 69.52 132.15 76.22 160.73 172.45 67.95 127.51 230.55 145.80 92.36 18 E2a_E2b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 19 ER2b ExonRegion 1 21.17 46.56 113.36 88.34 19.17 60.89 21.67 71.11 92.00 75.98 104.93 12.19 60.59 106.63 208.30 91.71 119.30 311.03 78.85 145.20 200.13 203.84 186.57 20 E2_Ab KnownBoundary 1 36.08 47.89 134.06 119.93 34.47 74.11 25.66 79.89 112.41 79.67 107.87 12.00 76.94 149.16 299.28 149.02 96.12 409.60 109.56 179.80 161.73 210.09 333.26 21 ER2c ExonRegion 0 124.81 308.73 148.33 173.94 90.52 149.68 73.75 143.95 202.74 146.99 144.20 88.31 94.70 154.04 249.06 144.75 150.64 378.65 122.65 165.96 242.19 312.75 220.24 22 E2_Db NovelBoundary 0 0.00 12.17 11.53 18.41 10.10 18.85 20.49 29.12 46.79 4.62 0.00 0.00 0.00 4.59 8.90 8.72 7.85 20.27 9.41 18.73 10.93 30.74 26.80 23 E2b_E3a KnownJunction 0 237.38 581.94 174.33 237.07 159.17 234.07 158.32 193.50 195.80 179.25 141.30 259.73 276.44 211.43 358.00 118.35 124.17 246.19 109.56 156.47 161.05 366.73 278.11 24 I2 Intron 0 14.91 28.24 8.31 20.94 13.26 7.24 14.29 14.93 41.21 10.39 3.58 13.78 16.54 9.07 17.53 10.65 9.70 21.98 6.28 25.80 19.43 10.90 16.20 25 I2_SR1 SilentIntronRegion 0 9.36 20.60 8.08 17.63 9.39 5.74 12.57 13.20 34.34 10.32 2.92 11.52 13.85 8.22 15.41 8.66 8.55 21.81 6.01 26.75 16.76 8.20 14.26 26 I2_AR1 ActiveIntronRegion 0 31.45 51.03 9.05 30.84 24.81 11.73 19.48 20.17 61.79 10.65 5.56 20.56 24.63 11.64 23.93 16.61 13.19 22.62 7.13 23.13 27.45 18.99 22.07 27 E3_Aa NovelBoundary 0 31.49 61.77 12.65 40.49 35.14 18.40 9.67 30.48 96.06 14.80 7.53 7.65 24.67 10.42 49.08 16.49 4.58 38.68 0.00 29.47 27.31 35.58 18.52 28 ER3a ExonRegion 0 174.32 531.83 220.17 289.34 208.46 261.25 168.30 212.14 282.49 194.37 151.30 239.57 285.41 204.15 292.41 185.85 150.15 306.14 150.88 173.35 240.42 440.92 278.16 29 E3a_E4a KnownJunction 0 186.11 621.27 275.66 381.00 354.58 327.03 228.10 229.44 349.07 190.59 119.77 202.57 322.38 217.38 439.21 237.63 120.71 355.26 294.22 173.98 234.75 571.74 388.32 30 I3_AR1 ActiveIntronRegion 0 23.60 16.41 10.24 9.96 18.77 8.22 13.16 15.20 9.53 7.52 5.00 8.59 14.25 1.78 4.98 8.56 13.67 16.97 5.18 15.61 0.73 5.99 7.00 31 ER4a ExonRegion 0 235.97 649.24 255.34 348.53 377.67 285.81 217.98 244.69 326.10 206.26 208.87 261.42 595.10 223.71 329.95 137.47 155.42 249.56 140.81 195.84 240.14 527.31 248.16 32 E4a_E5a KnownJunction 1 250.86 442.68 330.71 501.50 410.19 285.35 257.51 321.20 429.97 257.42 120.29 365.82 677.55 253.40 367.02 88.18 136.51 370.39 113.79 183.44 111.51 459.99 171.49 33 ER5a ExonRegion 0 102.77 175.17 116.30 178.97 237.33 171.30 137.12 132.85 187.10 103.89 69.65 161.26 245.52 70.31 131.79 65.93 68.91 118.96 99.29 105.85 67.13 254.39 134.60 34 E5_Da KnownBoundary 0 21.04 11.84 13.69 23.94 29.46 8.57 14.93 34.09 29.80 12.17 9.48 12.60 21.91 4.65 10.51 0.00 0.00 19.15 22.21 5.82 0.00 15.12 11.01 35 ER5b ExonRegion 0 6.88 13.18 10.29 15.79 13.78 6.30 7.69 20.36 10.54 12.53 3.60 9.58 5.78 0.90 2.50 2.81 1.56 9.94 10.12 16.47 1.04 14.03 4.65 36 IG9 Intergenic 0 6.06 9.10 5.43 5.02 10.49 4.13 4.93 9.38 7.88 6.04 1.13 0.74 1.06 1.73 2.54 2.81 2.29 16.22 4.52 8.16 2.02 4.52 5.71 37 IG9_SR2 SilentIntergenicRegion 0 7.30 11.01 6.37 5.81 12.59 4.59 5.92 11.09 9.33 6.44 0.84 0.90 1.29 1.31 2.51 3.22 2.33 16.51 4.74 8.96 1.98 5.22 6.35 38 IG9_AR2 ActiveIntergenicRegion 0 0.36 0.32 1.14 1.44 0.83 2.00 0.38 1.50 1.22 4.17 2.45 0.00 0.00 3.67 2.69 0.93 2.13 14.90 3.48 4.52 2.22 1.29 2.78