Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 TCOF1 Gene 0 94.07 57.94 141.86 67.61 64.82 52.97 69.79 95.54 57.70 203.15 296.77 96.08 70.06 306.97 233.36 231.88 217.54 204.87 139.53 94.67 93.29 67.83 62.25 2 394269 Transcript 0 4.92 1.75 2.61 3.21 5.72 1.94 6.38 7.86 4.39 8.09 28.22 10.13 6.12 32.69 28.55 26.87 18.00 8.38 6.46 3.28 3.52 1.31 4.25 3 427724 Transcript 0 0.00 0.00 0.88 2.14 0.00 0.00 1.32 0.00 0.88 2.29 0.00 0.00 0.00 1.28 0.00 0.00 0.00 0.00 0.00 0.61 0.00 0.00 0.00 4 414526 Transcript 0 1.48 1.32 4.27 3.53 1.83 2.90 3.82 2.14 10.03 4.54 14.82 12.53 3.41 16.86 17.06 28.50 21.27 17.82 10.45 5.69 1.39 8.85 6.10 5 451292 Transcript 0 9.48 6.09 16.70 17.96 2.15 3.37 11.00 7.76 5.23 34.84 35.83 14.58 9.03 31.16 15.26 24.88 21.02 46.84 51.81 14.38 7.60 8.15 2.82 6 445265 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 377797 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 8 439160 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 9 323753 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 10 323668 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 11 ER1a ExonRegion 0 1.56 0.00 0.00 0.00 2.28 0.00 0.00 0.00 0.00 0.00 4.83 0.00 0.00 3.63 8.28 3.58 2.23 0.00 0.00 1.81 0.00 3.31 2.42 12 E1_Ab KnownBoundary 0 6.08 0.00 0.00 0.00 4.33 4.83 1.99 2.30 0.00 0.00 11.58 0.00 0.00 9.30 5.19 7.69 8.32 0.00 0.00 3.26 0.00 6.25 11.52 13 ER1b ExonRegion 0 18.35 27.97 15.61 9.27 11.44 19.20 29.29 13.54 8.54 55.90 105.20 15.65 23.32 56.82 82.08 79.28 100.99 26.55 52.09 22.63 38.88 14.46 15.78 14 E1a_E2a KnownJunction 1 3.78 0.00 23.68 13.58 8.49 5.68 6.01 4.97 12.47 64.23 224.90 24.16 13.47 82.88 95.31 77.50 221.41 36.77 48.19 44.04 101.50 29.64 28.94 15 ER2a ExonRegion 0 4.20 11.73 71.16 27.04 15.53 15.46 16.86 50.40 29.86 153.79 343.09 53.19 58.29 208.44 198.79 202.74 286.71 161.32 150.45 86.47 89.25 59.98 61.77 16 E2a_E3a KnownJunction 0 3.78 24.47 117.97 50.18 20.20 37.19 15.85 100.63 44.47 254.14 375.04 49.37 87.82 315.03 358.98 330.08 265.64 295.11 210.45 165.61 91.37 82.54 103.80 17 ER3a ExonRegion 0 13.26 20.21 135.79 48.55 7.66 36.66 37.10 83.88 49.07 235.17 317.24 87.67 53.53 292.62 235.23 295.73 222.43 320.36 200.61 120.59 80.42 62.73 72.47 18 E3a_E4a KnownJunction 1 16.74 55.32 172.73 55.20 8.49 30.44 56.53 96.61 47.57 220.16 262.43 188.91 32.79 328.27 255.02 188.67 188.69 195.49 176.95 106.55 103.17 92.59 46.95 19 E4a_E11b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 20 ER4a ExonRegion 1 21.05 54.59 160.27 33.28 18.45 24.71 45.50 71.96 52.33 215.56 310.99 151.30 34.80 288.75 216.22 170.51 202.92 182.15 128.09 116.46 107.05 73.03 46.99 21 ER4b ExonRegion 0 60.22 68.44 142.99 41.53 59.55 43.91 64.97 95.44 63.64 254.53 379.34 110.20 58.16 351.13 201.61 184.60 280.28 192.74 91.51 124.45 140.16 58.30 37.86 22 E4b_E5a KnownJunction 1 93.65 73.47 140.98 63.96 102.63 31.80 84.35 105.60 70.22 288.09 445.64 144.50 41.07 367.83 191.85 258.05 305.84 203.04 204.99 119.84 141.84 92.59 55.74 23 ER5a ExonRegion 0 28.33 44.97 115.50 39.81 29.25 29.84 44.50 74.84 62.89 226.08 368.49 117.80 73.76 379.68 226.53 255.84 263.72 250.22 169.90 118.65 123.68 68.00 61.73 24 E5a_E6a KnownJunction 1 22.89 41.24 57.92 31.90 11.97 17.38 34.58 40.42 34.26 184.30 224.32 60.32 12.50 317.68 157.49 140.82 233.47 164.40 74.54 96.00 76.67 51.01 62.66 25 ER6a ExonRegion 0 25.83 27.70 78.23 28.80 46.25 31.42 46.52 54.35 46.27 189.97 264.78 55.99 36.76 341.35 163.57 205.12 181.50 263.45 107.83 106.38 87.17 58.42 67.46 26 E6a_E7a KnownJunction 0 28.67 47.23 96.00 33.50 111.80 52.36 80.99 71.30 42.51 172.75 298.23 145.10 112.17 430.34 257.49 351.96 264.05 288.35 200.85 113.96 56.96 74.46 78.36 27 E6a_E8a KnownJunction 1 3.04 0.00 16.35 4.99 12.99 5.00 6.40 13.35 11.81 29.41 80.70 0.00 0.00 59.10 43.64 49.13 50.02 54.30 36.42 20.65 15.14 25.47 14.94 28 ER7a ExonRegion 0 18.33 25.32 42.30 17.49 31.94 27.26 50.76 38.35 18.30 137.26 213.97 40.67 31.39 283.52 109.82 154.51 141.77 142.36 86.98 62.60 71.46 35.62 37.55 29 E7a_E8a KnownJunction 0 10.08 34.40 46.92 21.51 25.13 19.31 40.54 43.74 19.97 147.39 245.69 50.27 26.62 290.95 137.59 165.68 129.97 150.48 104.00 83.60 75.99 44.76 29.02 30 ER8a ExonRegion 1 21.83 28.06 69.20 20.45 27.69 39.78 48.89 55.49 35.35 183.30 259.68 47.64 20.35 310.34 146.48 179.10 197.33 168.15 96.37 90.68 82.46 47.42 53.12 31 E8a_E9a KnownJunction 0 27.34 58.54 103.16 24.91 23.94 51.56 63.42 70.40 51.39 202.59 202.21 86.73 19.32 335.16 158.23 175.59 204.77 218.00 92.14 73.06 80.06 47.33 52.84 32 ER9a ExonRegion 1 29.25 23.04 74.68 22.53 19.55 34.96 46.26 67.48 33.00 158.22 233.38 35.48 18.42 302.56 172.86 170.16 188.68 192.91 97.55 96.81 88.88 47.21 46.70 33 E9a_E10a KnownJunction 1 25.04 19.47 57.45 19.78 39.81 39.81 29.85 74.75 28.15 149.51 202.89 22.51 5.68 306.55 209.16 156.45 145.11 214.85 88.47 77.21 66.10 42.19 33.04 34 ER10a ExonRegion 1 27.96 27.93 61.34 18.80 37.36 33.33 64.94 64.38 33.22 150.48 239.67 29.48 11.21 307.93 188.17 168.34 177.37 187.89 109.14 84.29 86.73 47.30 45.48 35 E10a_E11a KnownJunction 1 24.60 24.21 70.67 24.44 22.75 31.23 72.82 61.53 32.75 181.02 239.90 31.06 6.82 288.78 198.03 191.66 195.89 216.88 141.46 82.58 81.98 56.03 74.95 36 ER11a ExonRegion 1 33.68 25.71 65.43 28.77 12.67 37.69 40.45 57.00 32.80 174.92 244.79 24.15 7.71 317.10 177.17 227.80 209.57 199.15 143.13 67.33 91.97 67.64 59.52 37 E11_Ab KnownBoundary 1 44.67 36.31 84.12 36.93 7.89 24.87 32.81 83.54 40.02 212.05 258.64 18.61 12.66 342.64 223.62 256.77 204.39 234.21 167.35 98.24 101.13 59.03 51.47 38 ER11b ExonRegion 1 30.71 30.22 87.19 34.42 29.59 32.01 44.31 66.19 41.90 188.05 281.40 35.22 20.95 333.91 190.18 220.04 215.08 289.44 148.87 105.20 97.79 60.04 62.67 39 E11_Da NovelBoundary 0 12.89 0.00 17.98 4.76 4.33 7.95 6.05 11.09 3.59 18.45 14.85 0.00 0.00 16.19 22.99 11.45 21.51 40.13 17.32 16.75 6.30 2.33 23.90 40 E11a_E12a KnownJunction 0 57.12 63.61 122.73 52.34 22.50 43.61 63.06 73.03 46.67 228.97 331.87 72.47 45.29 302.26 267.88 305.13 246.47 310.86 143.53 111.28 86.86 87.69 69.06 41 E12_Aa NovelBoundary 0 29.12 9.54 12.03 8.82 8.32 30.27 9.67 16.72 8.01 15.28 24.69 0.00 0.00 43.79 10.01 30.68 21.04 47.92 27.58 14.45 5.68 11.02 15.37 42 ER12a ExonRegion 0 33.23 34.58 129.29 43.71 37.80 40.06 58.31 77.51 45.89 204.66 311.55 66.87 42.19 321.64 206.74 247.99 234.17 245.84 125.70 103.87 119.71 62.98 71.43 43 E12a_E13a KnownJunction 0 49.79 45.78 163.48 54.87 60.19 44.12 63.29 104.37 49.10 271.95 377.89 69.32 39.12 311.61 211.63 287.53 216.27 329.43 212.71 112.62 149.32 56.46 58.73 44 ER13a ExonRegion 0 55.34 49.86 150.73 59.53 60.07 63.20 77.52 112.45 64.24 249.28 368.70 70.31 40.14 418.76 203.82 273.44 229.68 283.09 155.21 108.71 113.65 74.64 75.08 45 E13a_E14a KnownJunction 1 72.75 64.59 178.82 78.35 81.32 71.38 55.38 152.96 67.68 311.20 350.25 61.82 12.82 473.66 330.06 290.95 253.67 377.85 187.68 152.31 115.28 88.11 104.66 46 ER14a ExonRegion 0 69.77 60.44 175.58 84.29 65.72 69.49 78.93 142.07 87.72 337.00 495.14 121.03 64.43 441.59 300.65 354.78 304.83 352.59 202.22 140.84 143.00 87.06 103.27 47 E14a_E15a KnownJunction 0 152.99 100.18 238.58 137.94 107.56 106.25 148.92 208.57 104.86 454.64 721.76 189.21 102.75 560.19 450.71 518.67 403.93 442.51 314.74 232.53 167.60 125.90 129.41 48 ER15a ExonRegion 0 106.53 65.72 195.49 84.01 84.65 84.65 91.75 171.64 93.33 341.64 515.06 169.60 89.55 487.26 330.01 362.90 343.08 333.84 195.48 157.54 150.51 101.85 104.68 49 E15a_E16a KnownJunction 0 116.09 113.53 188.61 107.21 69.10 100.28 130.19 187.63 77.00 344.88 451.64 105.93 79.70 403.03 298.91 433.73 345.68 332.79 288.57 162.09 143.94 125.65 103.72 50 E15a_E17a KnownJunction 0 2.96 2.63 8.54 7.06 3.65 5.79 7.64 4.27 20.05 9.08 29.64 25.06 6.82 33.73 34.12 56.99 42.54 35.65 20.89 11.38 2.78 17.70 12.21 51 ER16a ExonRegion 0 64.75 53.99 162.64 59.51 52.86 54.26 66.99 121.64 58.63 274.11 351.00 77.50 54.01 374.18 235.52 267.76 279.62 271.83 176.10 134.90 123.93 80.89 67.95 52 E16a_E17a KnownJunction 0 109.13 91.63 198.19 73.85 99.15 46.22 82.58 152.47 58.30 325.14 360.04 138.35 62.82 461.95 348.23 413.74 277.33 409.89 308.34 144.77 107.37 113.77 93.47 53 ER17a ExonRegion 0 56.81 53.97 169.40 70.52 65.52 65.53 73.17 108.22 68.92 289.60 386.99 86.44 49.63 399.32 288.32 291.96 312.60 317.43 197.81 115.81 122.85 91.58 82.01 54 E17a_E18a KnownJunction 0 6.52 0.00 21.14 13.19 0.00 0.00 7.55 11.91 5.87 49.37 39.85 11.85 0.00 20.07 9.15 23.07 16.18 63.63 59.20 8.69 7.72 6.25 3.33 55 E17a_E19a KnownJunction 0 3.70 3.16 0.00 2.06 4.07 0.00 2.08 4.07 1.79 6.45 26.43 6.30 0.00 37.44 26.70 28.71 12.62 6.01 0.00 0.00 0.00 0.00 3.24 56 E17a_E20a KnownJunction 0 84.68 66.50 196.09 74.18 83.87 51.79 54.94 113.65 69.33 302.52 403.73 137.14 79.70 374.48 379.26 525.59 361.57 395.34 324.90 102.01 95.01 124.86 93.47 57 ER18a ExonRegion 0 7.61 5.31 10.56 13.13 2.46 4.82 10.75 7.68 4.31 32.27 38.47 11.78 13.94 46.44 27.73 31.76 24.71 29.63 34.78 11.12 9.39 4.24 5.13 58 E18a_E19a NovelJunction 0 0.00 0.00 1.39 1.80 0.00 0.00 4.42 2.34 1.68 3.98 27.32 0.00 0.00 14.01 8.90 4.36 0.00 0.00 0.00 0.00 0.00 0.00 0.00 59 E18a_E20a KnownJunction 0 14.30 12.96 18.39 27.57 3.99 5.28 14.71 3.70 5.50 22.89 29.17 20.11 13.15 26.96 8.90 19.82 22.16 47.26 61.46 23.33 5.68 13.96 0.00 60 ER19a ExonRegion 0 6.13 0.35 5.22 4.35 7.37 3.88 10.69 11.65 6.98 9.74 30.02 13.95 12.24 27.94 30.39 25.03 23.38 10.76 12.93 6.55 7.05 2.63 5.26 61 ER20a ExonRegion 0 69.82 61.75 203.02 84.58 40.08 44.28 59.12 115.58 70.45 298.42 376.64 80.13 60.77 382.47 307.63 287.98 302.11 316.75 164.48 127.92 115.21 98.58 82.96 62 E20a_E21a KnownJunction 0 174.25 84.59 283.43 129.55 80.65 87.45 108.24 213.79 106.19 409.35 569.88 101.88 79.22 369.77 238.21 503.80 339.22 513.73 314.64 204.15 130.97 172.31 132.82 63 ER21a ExonRegion 0 117.37 80.41 246.36 105.12 66.25 65.44 76.51 118.37 79.32 301.09 446.20 98.57 92.43 413.69 371.89 344.70 318.28 320.77 193.45 153.95 125.14 108.27 91.91 64 E21a_E22a KnownJunction 0 142.47 89.85 189.02 91.86 79.54 59.28 61.74 112.67 83.01 238.37 400.63 77.13 71.42 265.88 286.05 268.48 274.52 304.97 175.63 135.38 140.54 157.55 122.92 65 E21a_E23a KnownJunction 0 56.97 45.19 118.68 39.36 3.14 20.61 67.35 86.79 27.34 142.13 116.24 22.81 32.79 116.72 106.19 113.39 90.98 108.61 35.20 41.80 11.61 31.29 23.90 66 ER22a ExonRegion 0 78.22 62.29 143.40 74.87 38.40 43.00 49.10 93.12 72.90 184.51 352.52 83.85 63.23 282.13 239.48 202.50 222.64 232.44 138.56 113.72 113.10 107.25 68.55 67 E22a_E23a KnownJunction 1 73.79 60.78 191.33 73.18 44.31 40.94 73.53 113.86 91.00 207.45 418.32 89.88 33.44 285.48 197.54 234.81 222.25 254.11 133.09 117.74 93.10 82.42 91.08 68 E23_Aa NovelBoundary 0 13.19 10.06 36.90 41.32 3.57 25.61 12.72 14.58 10.42 12.81 19.32 0.00 0.00 9.71 4.57 12.22 8.70 15.88 3.95 0.00 5.75 8.27 11.35 69 ER23a ExonRegion 0 95.54 97.65 269.49 112.41 85.99 83.27 108.90 207.66 116.13 348.68 457.46 92.22 75.49 438.17 358.07 379.81 296.47 347.40 222.58 150.32 124.44 108.47 121.20 70 E23a_E24a KnownJunction 0 73.35 87.94 219.89 85.57 41.60 43.95 57.54 116.24 75.11 258.76 305.92 55.97 46.91 221.26 238.33 191.92 174.66 182.64 128.94 59.83 93.10 46.17 46.27 71 E23a_E24b KnownJunction 0 17.63 42.30 46.07 23.14 11.88 4.77 23.89 55.74 33.13 94.61 104.50 11.85 13.64 123.67 67.99 71.69 94.81 57.25 63.72 45.83 32.62 19.90 11.44 72 ER24a ExonRegion 0 65.08 78.80 193.00 90.97 40.14 38.97 63.55 131.79 73.49 263.21 328.59 57.37 53.94 250.52 205.99 202.85 195.58 180.62 142.55 76.60 100.27 55.21 47.72 73 ER24b ExonRegion 0 92.38 122.93 242.47 92.63 63.99 71.34 79.66 170.51 92.11 304.55 441.20 69.43 80.47 390.88 274.31 279.96 326.79 290.14 162.34 120.50 112.52 88.91 74.92 74 E24a_E25a KnownJunction 0 183.66 188.72 265.63 105.28 110.02 101.31 104.71 217.12 111.95 348.94 493.86 97.23 96.10 393.43 374.31 479.36 282.28 461.42 261.84 153.15 138.94 148.55 157.49 75 ER25a ExonRegion 0 188.41 116.45 313.23 147.06 131.82 94.80 112.95 185.39 103.82 321.00 437.53 77.81 77.45 391.10 368.11 325.67 282.11 277.41 193.50 149.73 136.92 104.60 103.89 76 E25a_E26a KnownJunction 0 325.69 133.46 367.96 152.36 208.83 120.16 147.33 225.17 103.01 307.27 510.66 69.17 91.23 492.20 400.15 336.58 324.08 311.77 216.95 180.05 129.30 111.44 109.95 77 I25 Intron 0 11.41 7.52 14.35 18.51 5.79 3.06 8.77 9.10 7.96 10.43 5.56 1.99 2.42 2.35 6.75 5.86 5.87 17.60 13.60 5.59 3.32 3.14 3.05 78 I25_SR1 SilentIntronRegion 0 14.85 8.61 18.12 21.46 6.20 2.73 10.16 9.60 7.62 11.24 6.49 1.61 1.92 1.98 6.15 7.26 7.55 17.78 16.72 4.11 3.20 3.36 3.61 79 I25_AR2 ActiveIntronRegion 0 23.74 13.01 10.96 20.22 5.30 0.00 3.49 4.43 8.38 3.96 10.40 0.00 0.00 1.12 6.38 1.30 5.52 8.43 20.97 2.90 1.56 4.51 7.05 80 E26_Aa NovelBoundary 0 41.34 17.50 31.90 19.74 24.28 13.86 4.11 8.91 12.59 17.33 7.32 0.00 0.00 2.12 10.01 3.85 9.54 22.72 8.66 2.68 5.81 0.00 0.00 81 ER26a ExonRegion 0 326.23 137.16 275.39 138.15 149.80 102.66 131.97 156.48 86.61 266.09 333.49 121.73 87.40 413.88 350.31 301.53 259.66 212.37 184.86 121.78 120.46 91.67 78.43 82 E26a_E28a KnownJunction 1 352.51 132.87 161.14 111.24 113.33 78.82 148.70 95.00 42.91 121.42 262.17 382.02 183.75 469.54 541.57 272.24 225.71 90.82 155.20 110.83 59.62 130.61 85.45 83 ER27a ExonRegion 0 0.00 0.00 0.88 2.14 0.00 0.00 1.32 0.00 0.88 2.29 0.00 0.00 0.00 1.28 0.00 0.00 0.00 0.00 0.00 0.61 0.00 0.00 0.00 84 ER28a ExonRegion 0 279.81 176.07 237.72 193.18 327.23 207.28 255.57 141.47 98.91 254.39 530.28 502.92 313.80 468.66 460.68 426.62 476.54 186.28 289.15 120.71 142.75 141.36 104.61 85 E28a_E29a KnownJunction 0 760.51 223.45 600.81 379.01 766.72 346.56 462.16 301.98 189.73 525.58 626.79 607.85 604.18 559.01 644.05 645.64 687.89 373.87 439.92 194.63 142.34 156.51 177.81 86 ER29a ExonRegion 0 349.44 168.95 493.77 324.81 404.15 197.34 256.31 288.72 162.23 509.34 632.18 609.66 605.59 577.62 803.23 641.07 562.10 448.17 360.53 189.45 175.04 209.59 158.64 87 E29a_E30a KnownJunction 0 170.10 127.28 474.14 352.70 179.54 113.85 136.33 315.90 178.70 561.93 656.53 573.34 282.94 611.99 798.94 636.84 473.59 511.41 358.50 201.91 193.86 281.86 148.45 88 ER30a ExonRegion 0 258.82 114.82 236.21 155.36 140.31 84.75 121.74 153.30 108.60 270.18 426.55 302.78 244.26 417.96 448.23 379.48 315.70 229.84 225.01 111.47 123.35 121.40 86.47 89 ER30b ExonRegion 1 10.44 1.76 0.08 0.00 6.60 6.11 3.71 0.00 1.15 1.07 7.35 1.15 16.88 16.13 33.85 4.95 5.06 0.00 7.64 1.56 1.32 0.00 2.35 90 IG45 Intergenic 0 14.19 0.99 3.00 2.23 4.89 0.67 2.74 7.85 13.46 3.64 14.96 5.09 10.15 3.74 14.50 14.85 36.80 3.75 5.82 2.85 0.27 0.51 0.89 91 IG45_AR1 ActiveIntergenicRegion 0 9.67 0.61 4.15 3.00 2.84 0.55 3.90 8.57 14.20 2.23 9.42 3.66 10.23 2.42 11.73 13.07 35.90 3.53 6.75 2.61 0.33 0.07 0.00 92 IG45_SR1 SilentIntergenicRegion 0 17.96 1.47 2.88 0.95 7.33 0.79 1.62 8.17 14.59 5.03 18.90 4.95 4.20 2.72 12.36 14.97 32.86 5.11 6.42 3.65 0.00 0.84 2.12 93 IG45_SR3 SilentIntergenicRegion 0 16.33 0.75 0.67 3.71 3.96 0.68 2.92 5.61 9.42 3.74 19.13 9.10 25.80 9.70 27.54 19.66 50.97 1.02 2.31 1.57 0.81 0.77 0.00