Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 CDKN2AIPNL Gene 0 97.59 294.87 227.64 120.92 195.90 140.49 153.47 170.39 134.23 171.15 167.07 157.44 88.02 175.80 227.42 92.14 145.43 131.31 247.34 138.99 61.06 65.97 37.73 2 395009 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 458198 Transcript 0 62.32 212.12 280.23 176.37 237.53 291.29 210.63 209.54 191.41 233.86 224.74 124.51 93.12 234.76 306.21 111.08 186.36 242.10 332.06 186.43 76.64 87.40 36.55 4 ER1a ExonRegion 1 23.76 50.94 59.01 29.92 25.96 49.77 46.81 28.66 40.72 44.82 53.49 9.90 13.71 52.24 98.98 33.37 56.31 74.30 84.04 32.25 25.69 17.10 8.44 5 E1_Da NovelBoundary 0 0.00 3.22 25.10 12.99 4.33 10.51 0.00 20.29 8.97 13.46 15.42 5.70 0.00 7.18 5.19 4.27 3.65 54.97 16.94 11.31 0.00 0.00 0.00 6 E1a_E3a KnownJunction 0 30.97 117.61 274.35 158.02 50.34 76.55 76.31 169.64 191.00 218.92 149.20 67.22 100.32 296.49 382.47 160.90 101.17 458.64 452.62 157.68 50.90 68.52 51.82 7 ER2a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER3a ExonRegion 0 64.45 148.86 258.86 169.71 227.71 296.64 201.57 223.83 185.88 225.58 253.62 111.05 71.19 202.74 245.01 102.15 246.74 235.87 303.02 179.04 86.56 86.97 29.31 9 E3a_E4a KnownJunction 1 25.26 180.89 301.82 229.24 418.25 636.34 377.50 229.07 226.13 279.85 297.34 103.53 83.92 221.62 323.63 68.44 230.86 132.86 271.25 235.66 97.79 112.67 15.62 10 I3_AR2 ActiveIntronRegion 0 17.64 21.69 9.80 12.04 5.35 0.00 7.94 8.64 11.12 5.93 3.87 0.00 9.38 1.62 4.84 12.88 0.00 16.94 6.37 10.64 4.41 2.08 14.19 11 ER4a ExonRegion 0 128.62 401.10 285.88 148.51 253.80 155.65 187.15 215.62 162.61 211.10 198.81 216.23 117.05 218.20 273.74 112.83 166.68 141.04 301.32 173.33 71.32 81.43 49.46 12 IG47 Intergenic 0 18.45 27.32 13.72 28.85 26.88 13.99 22.30 23.39 23.29 15.43 3.52 10.06 8.35 3.42 6.54 8.44 7.45 17.21 16.20 19.67 5.31 4.71 11.39 13 IG47_SR4 SilentIntergenicRegion 0 28.03 45.76 26.68 28.49 71.35 24.90 42.18 45.93 38.32 36.32 8.09 14.47 3.44 5.73 12.25 10.15 10.09 19.19 39.95 16.93 4.23 6.00 10.73 14 IG47_AR4 ActiveIntergenicRegion 0 13.42 32.93 20.62 26.18 43.07 22.46 30.01 36.15 31.50 24.90 6.38 21.12 12.68 5.01 10.09 7.91 5.86 27.29 38.14 18.06 7.13 2.03 12.17 15 IG47_SR3 SilentIntergenicRegion 0 13.69 26.56 13.48 18.92 27.02 12.65 15.95 21.94 18.77 13.30 2.92 8.73 8.18 5.35 5.49 7.05 5.93 12.85 13.69 10.67 2.46 2.53 8.75 16 IG47_AR2 ActiveIntergenicRegion 0 18.79 27.47 11.27 26.31 20.53 10.19 18.43 18.18 18.79 11.42 3.57 8.55 8.51 3.13 6.68 8.71 7.61 20.24 17.61 21.10 6.73 3.90 12.53 17 IG47_SR2 SilentIntergenicRegion 0 8.98 17.92 11.31 20.29 14.85 8.39 18.89 11.85 11.50 8.82 1.71 9.55 6.38 2.43 7.10 8.52 6.81 15.28 11.81 17.11 6.62 2.62 18.34 18 IG47_AR1 ActiveIntergenicRegion 0 18.74 20.17 13.08 34.97 27.80 14.47 24.31 28.68 28.37 17.93 3.20 12.97 9.60 2.71 5.66 9.89 8.89 14.95 12.65 22.90 5.07 5.24 10.57 19 IG47_SR1 SilentIntergenicRegion 0 28.06 42.42 21.04 44.89 41.43 27.50 35.97 32.44 37.11 24.61 3.89 7.20 6.41 3.32 6.29 5.99 6.17 13.11 11.23 21.61 2.70 11.40 7.60