Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 AC004041.1 Gene 0 2.10 3.07 2.58 4.02 3.03 2.86 5.00 3.65 3.47 3.23 4.56 3.00 5.52 3.18 2.88 7.01 7.63 3.34 2.55 4.22 2.39 0.98 2.08 2 435042 Transcript 0 2.44 2.23 0.76 0.26 4.33 4.99 3.66 2.18 1.09 0.17 4.77 1.97 5.04 3.60 1.77 5.97 5.91 1.59 0.91 2.85 0.54 0.28 0.49 3 458509 Transcript 0 0.00 0.00 0.00 0.63 0.00 0.00 0.00 0.00 0.00 0.42 0.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.81 4 417516 Transcript 0 0.00 0.00 0.27 0.29 0.00 0.00 0.00 0.38 0.53 0.25 0.57 0.52 0.00 0.20 0.00 0.00 0.00 0.40 0.00 0.00 0.00 0.00 0.86 5 457489 Transcript 0 1.60 4.28 4.11 5.95 2.25 1.54 5.24 4.32 4.76 5.02 4.78 2.96 3.71 2.24 3.38 8.25 9.58 3.56 2.68 4.81 2.96 1.23 1.98 6 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.05 0.00 0.00 0.73 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 E1a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8 ER2a ExonRegion 0 0.00 0.00 0.00 0.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 9 E2a_E4a KnownJunction 0 0.00 0.00 0.00 2.06 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 10 ER3a ExonRegion 0 0.00 0.00 0.54 0.57 0.00 0.00 0.00 0.75 1.06 0.50 1.13 1.05 0.00 0.39 0.00 0.00 0.00 0.81 0.00 0.00 0.00 0.00 1.72 11 E3a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 12 E4_Aa NovelBoundary 0 131.88 233.38 222.29 179.10 243.63 152.01 142.12 146.68 104.08 190.34 308.45 359.37 269.95 266.17 303.98 195.85 231.98 131.49 101.27 183.51 70.74 128.90 85.62 13 ER4a ExonRegion 0 0.00 1.22 0.00 0.67 0.00 0.00 0.79 2.32 0.00 0.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.24 14 E4_Da NovelBoundary 0 77.57 93.86 114.37 141.24 118.42 125.84 88.02 82.93 97.66 174.63 196.37 226.27 144.96 199.31 259.10 203.62 188.69 141.69 87.44 116.97 95.75 122.16 79.13 15 E4a_E6a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.67 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.24 16 E4b_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER4b ExonRegion 0 0.00 0.14 0.00 0.00 0.00 0.00 0.09 3.57 0.25 0.00 0.00 0.00 0.00 0.00 0.00 1.19 0.88 0.25 0.42 0.00 0.00 0.00 0.00 18 Ix Intron 0 13.81 14.47 5.14 10.54 18.25 16.04 19.63 14.89 9.28 5.07 18.05 12.23 10.48 18.64 9.94 19.39 14.68 26.28 16.53 13.56 7.19 6.18 6.53 19 Ix_AR2 ActiveIntronRegion 0 13.67 13.25 5.34 11.15 17.79 19.74 16.23 14.14 10.28 5.96 17.59 10.73 10.57 21.56 11.33 18.93 14.90 29.32 16.62 14.42 8.85 6.85 6.12 20 Ix_SR1 SilentIntronRegion 0 15.85 20.60 5.30 10.38 23.38 6.78 33.24 19.85 7.70 3.09 22.84 19.43 12.10 12.54 7.29 22.92 16.07 21.05 18.19 13.38 3.07 5.15 8.69 21 E5_Aa NovelBoundary 0 16.67 33.28 9.49 22.87 32.43 18.57 18.68 21.97 12.96 10.05 18.95 24.76 15.10 24.72 4.45 33.24 24.50 28.64 17.32 14.32 0.00 3.12 12.63 22 ER5a ExonRegion 0 12.18 11.03 3.82 1.30 21.63 24.95 18.21 7.34 5.18 0.83 22.78 9.87 25.22 17.25 8.85 28.65 28.68 7.69 4.13 14.27 2.71 1.40 2.46 23 E5_Da NovelBoundary 0 6.67 25.32 18.48 16.81 18.76 20.95 18.06 26.70 19.70 7.12 12.42 13.20 19.64 12.13 8.90 14.44 28.24 18.99 23.06 30.10 16.43 0.00 12.38 24 E5a_E6a KnownJunction 0 0.00 0.00 0.00 1.66 0.00 0.00 0.00 0.00 1.33 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 25 ER5b ExonRegion 0 8.31 9.11 4.72 1.87 15.96 12.56 6.67 8.26 5.81 1.15 17.54 4.33 15.46 14.62 5.59 13.43 9.54 7.80 2.48 3.94 2.69 1.16 0.33 26 Ix Intron 0 11.54 16.17 12.45 17.30 12.31 10.62 16.84 12.44 10.87 11.84 23.82 18.43 15.37 20.65 10.49 29.03 24.18 44.66 14.47 21.87 13.75 6.51 11.34 27 Ix_SR1 SilentIntronRegion 0 11.55 16.19 12.46 17.32 12.32 10.63 16.86 12.45 10.88 11.86 23.85 18.45 15.39 20.68 10.50 29.07 24.21 44.71 14.49 21.90 13.77 6.52 11.35 28 E6_Aa NovelBoundary 0 3.78 26.05 11.65 21.41 0.00 0.00 16.74 5.09 4.57 8.27 7.90 18.46 14.61 12.01 15.82 27.60 12.53 17.87 13.74 15.85 5.75 8.14 12.89 29 ER6a ExonRegion 0 3.04 5.87 1.94 7.55 1.49 1.82 7.42 1.30 5.44 2.18 3.51 5.13 14.46 4.63 3.44 2.72 12.10 2.34 7.52 5.14 4.04 1.87 3.89 30 E6_Da KnownBoundary 0 131.50 188.26 169.63 168.08 78.86 89.04 107.98 77.22 109.20 165.23 274.60 637.86 392.99 282.77 323.14 222.51 241.98 151.84 121.70 169.51 108.11 107.16 90.91 31 E6a_E7a KnownJunction 0 0.00 3.09 1.18 1.66 0.00 0.00 0.00 0.00 1.56 0.00 2.32 0.00 0.00 0.00 0.00 0.00 4.02 0.00 0.00 0.00 0.00 0.00 0.00 32 ER6b ExonRegion 0 0.00 0.00 0.00 1.26 0.00 0.72 0.82 1.35 1.08 0.00 1.77 0.00 1.20 0.00 0.00 1.85 3.78 4.15 0.00 1.32 1.37 0.00 1.83 33 E6_Dc NovelBoundary 0 11.34 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 4.30 0.00 0.00 0.00 0.00 0.00 0.00 34 ER6c ExonRegion 0 0.00 0.00 0.00 0.00 0.00 1.34 0.00 0.80 0.19 0.00 1.93 0.00 3.79 0.00 0.00 0.00 1.02 1.35 0.00 0.00 0.00 0.00 0.00 35 ER6d ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.97 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 36 E7_Aa NovelBoundary 0 77.87 51.18 53.58 60.70 41.17 17.83 35.37 65.92 35.97 46.85 12.74 0.00 7.95 2.83 13.35 57.08 23.38 27.40 16.38 26.59 3.09 25.66 16.39 37 ER7a ExonRegion 0 3.21 5.48 7.03 10.23 4.50 3.09 10.47 8.64 7.96 10.05 7.24 5.92 7.43 4.48 6.76 16.51 15.13 7.12 5.36 9.63 5.93 2.45 3.95