Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SLC22A4 Gene 0 9.44 10.15 7.21 9.79 7.57 6.47 3.64 7.43 17.29 5.55 0.00 0.56 2.92 2.27 2.64 1.07 4.07 6.68 6.83 7.31 25.96 76.02 76.94 2 200652 Transcript 0 15.09 8.94 6.31 7.76 6.39 6.84 3.42 6.41 16.60 6.13 0.00 0.11 1.80 2.47 1.39 0.75 1.78 3.85 5.23 3.42 31.19 112.66 105.22 3 491257 Transcript 0 0.90 1.69 1.04 0.78 0.84 1.63 0.58 1.92 2.99 1.67 0.00 0.38 1.01 1.26 1.01 0.19 1.57 7.34 2.95 3.08 4.52 3.01 12.17 4 425923 Transcript 0 0.42 0.39 1.02 0.57 1.50 1.48 0.63 0.72 2.68 0.64 0.00 0.35 0.00 1.07 0.77 1.11 1.54 2.47 2.08 1.57 5.35 3.51 6.01 5 ER1a ExonRegion 0 1.14 0.80 4.91 2.71 0.72 2.28 0.42 4.40 9.67 2.77 0.00 0.00 1.39 1.20 1.16 0.27 0.62 7.82 6.88 3.83 30.83 30.72 67.72 6 E1a_E3a KnownJunction 0 0.00 3.35 5.00 1.37 0.00 2.27 2.08 0.00 7.35 0.00 0.00 0.00 0.00 0.00 5.07 0.00 0.00 2.07 0.00 0.00 15.63 23.33 45.93 7 Ix Intron 0 0.00 0.62 2.77 1.23 0.81 1.11 0.80 1.56 3.35 2.08 0.00 0.00 1.17 1.25 0.88 0.90 0.00 8.36 5.80 3.88 3.34 4.43 18.72 8 Ix_AR1 ActiveIntronRegion 0 0.00 0.62 2.80 1.25 0.82 1.13 0.81 1.58 3.39 2.10 0.00 0.00 1.19 1.26 0.89 0.91 0.00 8.45 5.87 3.92 3.39 4.48 18.95 9 E2_Aa NovelBoundary 0 0.00 3.09 9.46 5.26 0.00 0.00 2.25 10.51 10.47 1.10 2.37 0.00 0.00 0.00 0.00 0.00 4.77 10.36 22.97 9.33 22.18 2.27 15.19 10 ER2a ExonRegion 0 0.55 2.11 3.31 3.13 2.08 0.47 1.71 4.00 9.49 3.54 0.00 0.00 2.21 1.98 0.75 0.77 1.71 8.25 5.77 5.48 8.97 8.12 26.62 11 E2_Da NovelBoundary 0 3.63 0.00 10.44 3.60 0.00 0.00 0.00 0.00 12.64 0.00 0.00 0.00 6.17 2.47 0.00 0.00 0.00 14.30 13.74 0.00 23.85 0.00 20.06 12 E2a_E3a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.03 0.00 0.00 13 I2 Intron 0 2.65 6.24 7.44 9.24 5.41 3.44 2.89 9.23 15.53 7.70 0.07 0.20 0.92 1.66 2.54 1.19 1.84 11.05 8.00 9.02 7.14 8.34 18.58 14 I2_AR1 ActiveIntronRegion 0 0.63 2.59 5.52 4.23 2.06 1.38 1.19 4.90 7.73 3.30 0.00 0.00 0.70 1.05 0.44 1.34 0.99 7.63 11.37 8.74 11.91 8.45 23.55 15 I2_SR1 SilentIntronRegion 0 1.49 4.77 7.22 6.85 2.26 3.30 1.98 6.91 11.40 5.37 0.12 0.00 1.14 1.45 1.68 0.28 1.34 10.72 8.69 6.71 8.18 8.92 18.43 16 I2_AR2 ActiveIntronRegion 0 1.91 7.45 11.55 14.78 7.05 5.14 2.20 9.66 25.12 10.16 0.00 0.00 0.00 1.21 4.58 1.11 2.43 19.84 7.49 11.51 10.13 9.64 37.70 17 I2_AR3 ActiveIntronRegion 0 2.12 7.80 2.86 5.57 2.68 4.43 5.85 11.38 24.29 7.65 0.00 0.00 0.00 3.25 6.29 0.00 1.10 18.02 3.19 7.80 6.61 6.42 28.88 18 I2_AR4 ActiveIntronRegion 0 2.12 8.88 7.16 9.47 4.51 1.83 3.97 11.01 29.90 11.95 0.00 0.00 0.00 2.65 9.31 0.00 0.00 12.45 0.17 8.85 9.39 8.33 36.17 19 I2_AR5 ActiveIntronRegion 0 2.37 5.26 9.73 13.31 7.71 0.76 3.27 9.76 30.95 14.98 0.00 0.00 0.00 0.00 9.05 0.00 0.00 11.52 0.00 12.77 14.39 7.35 37.31 20 I2_AR6 ActiveIntronRegion 0 2.94 4.86 8.57 9.68 3.58 2.73 1.98 7.57 23.54 10.17 0.00 0.00 0.00 2.53 4.07 1.26 1.88 10.77 13.13 13.35 15.57 8.55 38.21 21 I2_SR2 SilentIntronRegion 0 1.63 5.67 11.07 8.64 6.31 1.77 2.51 8.26 14.51 8.89 0.00 0.00 0.00 3.18 5.18 1.98 0.20 9.81 9.77 10.45 10.45 14.17 23.70 22 I2_AR7 ActiveIntronRegion 0 5.98 9.63 11.57 11.09 9.35 5.48 3.24 12.32 21.94 11.70 0.32 0.00 0.64 1.60 2.57 1.01 1.23 17.47 11.31 13.59 11.21 16.82 27.61 23 I2_SR3 SilentIntronRegion 0 7.70 15.02 14.28 14.66 9.24 7.46 7.56 13.80 32.41 14.62 0.00 0.00 0.63 1.00 5.84 1.86 3.43 18.31 7.35 24.82 15.10 22.09 35.20 24 I2_AR8 ActiveIntronRegion 0 6.28 11.06 12.23 14.00 8.76 3.15 4.90 13.31 31.99 9.52 0.00 0.88 3.15 2.54 3.70 0.91 3.70 16.74 9.13 12.14 14.54 23.69 32.07 25 E3_Aa NovelBoundary 0 3.04 6.58 20.90 6.56 0.00 21.35 1.85 22.47 13.14 14.88 0.00 0.00 0.00 7.36 4.45 4.36 4.11 34.49 9.41 0.00 0.00 0.00 11.69 26 ER3a ExonRegion 0 1.61 2.48 1.32 1.74 0.00 0.53 0.81 0.70 6.78 0.13 0.00 0.00 0.00 0.86 1.53 0.00 1.49 1.71 1.56 0.06 30.92 23.62 70.54 27 E3a_E4a KnownJunction 0 6.67 0.00 3.02 7.13 0.00 2.90 3.93 2.55 6.02 1.16 0.00 0.00 0.00 2.35 4.70 0.00 0.00 3.86 0.00 0.00 40.65 39.99 85.36 28 Ix Intron 0 0.50 8.42 5.41 5.82 1.89 3.45 2.36 3.87 11.42 6.42 0.00 0.34 0.95 3.03 1.72 1.96 3.88 14.90 7.04 5.40 2.28 2.74 5.93 29 Ix_SR1 SilentIntronRegion 0 0.50 8.43 5.42 5.83 1.89 3.45 2.37 3.88 11.44 6.44 0.00 0.34 0.95 3.03 1.73 1.96 3.89 14.93 7.05 5.41 2.28 2.75 5.94 30 E4_Aa NovelBoundary 0 0.00 17.83 3.08 12.69 15.87 5.79 0.00 0.00 8.88 4.54 0.00 0.00 0.00 2.47 4.45 0.00 0.00 17.33 12.61 10.87 2.72 0.00 3.24 31 ER4a ExonRegion 0 4.97 11.39 6.40 6.72 3.52 4.84 0.97 5.41 18.74 5.05 0.00 1.28 1.54 4.54 2.83 2.93 4.43 11.38 6.37 7.14 37.68 59.35 92.46 32 E4_Da NovelBoundary 0 6.22 31.97 3.49 3.00 0.00 12.38 3.75 4.56 12.30 17.41 0.00 0.00 7.30 4.53 17.80 0.00 0.00 21.10 22.87 21.73 2.78 0.00 27.66 33 E4a_E5a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.42 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 1.99 0.00 0.00 2.72 0.00 0.00 34 E4a_E6a KnownJunction 0 3.33 2.89 3.28 3.66 0.00 7.67 0.00 0.00 7.87 4.57 0.00 0.00 0.00 2.30 0.00 0.00 0.00 0.00 0.00 0.00 23.04 106.61 89.55 35 E4a_E8a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 4.32 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 14.33 9.31 16.56 36 Ix Intron 0 1.90 5.66 3.14 4.79 2.92 3.57 3.14 7.33 12.62 6.36 0.00 0.18 2.48 4.10 2.98 3.13 4.70 13.44 7.36 9.74 7.68 11.96 23.55 37 Ix_SR1 SilentIntronRegion 0 0.89 5.26 3.36 5.43 3.17 3.15 2.50 7.25 12.82 6.15 0.00 0.12 1.39 3.67 2.71 3.85 4.75 15.72 8.66 10.33 8.04 10.12 22.10 38 Ix_AR1 ActiveIntronRegion 0 0.00 1.82 3.07 2.71 1.85 2.34 3.26 2.00 14.20 7.74 0.00 0.78 0.00 2.78 0.68 1.30 6.98 12.93 6.63 5.18 7.50 6.02 25.88 39 Ix_AR2 ActiveIntronRegion 0 0.00 2.53 4.22 2.55 1.08 1.64 0.88 6.57 11.90 4.47 0.00 0.00 0.00 1.03 0.00 4.27 1.49 12.77 1.79 5.74 7.33 7.41 12.10 40 Ix_SR2 SilentIntronRegion 0 2.59 6.26 3.01 4.75 2.97 3.94 3.52 7.81 12.44 6.44 0.00 0.17 3.28 4.53 3.40 2.88 4.63 12.46 7.03 9.97 7.54 13.46 24.54 41 E5_Aa NovelBoundary 0 3.04 2.57 3.55 12.32 10.95 4.77 4.24 19.92 14.90 13.73 0.00 0.00 0.00 10.42 0.00 4.02 4.77 21.56 14.40 9.01 0.00 11.88 20.32 42 ER5a ExonRegion 0 3.04 4.65 0.86 0.00 1.26 6.06 0.63 3.70 1.08 3.13 0.00 1.52 1.82 3.07 3.30 0.00 4.55 19.11 6.02 6.84 3.35 3.92 22.05 43 E5_Da NovelBoundary 0 0.00 2.70 0.00 4.59 3.65 0.00 2.25 10.27 17.53 6.55 0.00 0.00 0.00 7.00 0.00 0.00 0.00 16.17 4.80 18.34 8.90 9.37 15.11 44 Ix Intron 0 1.35 3.30 3.07 5.17 3.72 3.72 4.98 7.01 11.08 4.35 0.11 1.28 2.24 4.55 4.23 3.79 2.29 15.15 9.59 7.88 6.89 10.98 19.72 45 Ix_AR1 ActiveIntronRegion 0 1.85 4.76 2.13 6.14 0.99 3.69 4.78 3.94 11.69 4.31 0.00 1.04 2.25 5.45 5.04 5.81 2.30 20.92 6.50 4.88 8.56 10.43 26.46 46 Ix_SR1 SilentIntronRegion 0 1.23 2.94 3.31 4.95 4.41 3.73 5.05 7.79 10.96 4.38 0.14 1.35 2.24 4.33 4.04 3.29 2.29 13.76 10.39 8.65 6.49 11.14 18.10 47 E6_Aa NovelBoundary 0 0.00 12.04 4.11 2.06 3.57 0.00 3.97 3.90 14.00 5.48 0.00 0.00 5.84 2.47 0.00 0.00 4.77 12.89 8.56 8.63 8.59 12.06 40.21 48 ER6a ExonRegion 0 7.40 7.52 5.01 6.76 4.78 4.49 2.75 5.99 13.50 2.86 0.00 0.00 4.58 2.30 5.97 1.76 5.87 5.53 5.59 1.86 25.74 80.65 68.11 49 E6_Da NovelBoundary 0 3.78 10.92 1.66 3.76 3.40 0.00 4.50 10.93 8.80 4.46 0.00 0.00 0.00 4.65 8.90 0.00 3.55 11.77 4.80 15.66 8.53 3.06 29.02 50 E6a_E7a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 51 E6a_E8a KnownJunction 0 7.41 15.26 4.17 3.10 0.00 2.33 0.00 2.14 10.91 1.53 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 18.90 111.20 52.93 52 E7_Aa NovelBoundary 0 0.00 2.96 3.96 3.80 4.41 0.00 0.00 4.15 10.91 5.26 0.00 0.00 0.00 5.47 0.00 4.10 13.09 2.11 4.33 3.26 3.15 16.47 31.33 53 ER7a ExonRegion 0 1.26 1.17 3.07 1.70 4.50 2.13 1.90 2.17 6.79 1.93 0.00 1.05 0.00 3.21 2.30 3.33 4.62 7.42 6.25 4.72 10.11 10.53 18.04 54 E7_Da NovelBoundary 0 0.00 0.00 6.03 9.22 4.33 2.61 4.15 2.46 13.40 1.21 0.00 0.00 0.00 2.30 0.00 0.00 4.39 6.80 0.00 0.00 17.85 10.84 15.79 55 E7a_E8a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 2.33 0.00 0.00 1.24 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 5.93 0.00 0.00 56 E8_Aa NovelBoundary 0 0.00 8.35 1.21 9.19 0.00 5.28 9.36 8.95 5.44 9.13 0.00 6.30 7.95 2.41 9.52 0.00 4.39 0.00 0.00 5.62 0.00 38.58 7.34 57 ER8a ExonRegion 0 13.44 12.48 8.29 8.95 1.25 3.70 3.60 5.07 19.66 8.72 0.00 1.59 5.42 2.83 4.23 0.00 4.63 3.39 18.26 2.09 30.87 142.44 113.18 58 E8_Da NovelBoundary 0 13.34 9.27 8.10 7.46 0.00 10.16 4.02 10.02 19.91 7.39 0.00 0.00 0.00 5.47 0.00 0.00 4.77 8.00 3.76 3.26 33.11 134.16 96.37 59 E8_Db NovelBoundary 0 0.00 18.48 1.24 6.86 11.46 0.00 4.20 4.11 6.31 6.23 0.00 6.30 0.00 2.47 0.00 0.00 0.00 2.11 8.85 6.07 0.00 3.12 0.00 60 E8b_E9a KnownJunction 0 14.89 3.16 7.16 1.63 0.00 8.40 2.25 10.27 17.62 5.83 0.00 0.00 0.00 2.47 0.00 0.00 0.00 5.93 4.05 0.00 23.35 155.72 99.79 61 ER8b ExonRegion 0 16.11 5.08 7.56 2.95 1.04 11.00 2.21 8.45 18.73 7.01 0.00 0.00 0.00 3.25 0.00 0.50 0.00 5.54 4.60 0.24 35.87 156.73 116.65 62 Ix_AR1 ActiveIntronRegion 0 0.98 1.13 4.73 8.07 0.62 4.49 0.77 3.43 6.95 3.02 0.00 0.00 2.67 10.02 10.18 2.38 10.72 6.74 1.52 6.42 0.00 0.00 5.11 63 Ix_AR2 ActiveIntronRegion 0 0.53 4.05 5.45 9.60 5.99 3.19 1.65 3.84 6.41 5.10 0.00 0.00 2.13 3.30 10.70 2.96 7.39 9.36 5.55 5.29 0.55 0.52 0.73 64 Ix_AR3 ActiveIntronRegion 0 1.80 1.68 1.93 6.20 9.76 1.95 3.47 5.41 6.21 3.45 0.00 0.00 7.46 7.35 7.60 7.68 2.15 17.15 3.78 3.40 0.00 1.32 1.86 65 E9_Aa NovelBoundary 0 3.41 3.35 1.33 13.88 7.64 0.00 10.20 9.20 8.97 4.41 0.00 0.00 13.47 2.30 16.56 0.00 0.00 0.00 9.13 5.75 0.00 0.00 4.35 66 ER9a ExonRegion 0 11.41 10.04 7.37 10.16 20.90 10.60 9.17 5.35 17.45 8.69 0.00 0.00 3.55 2.14 1.10 1.50 7.09 5.27 6.71 1.14 39.43 134.99 131.99 67 E9_Da NovelBoundary 0 3.78 22.63 0.00 5.86 18.08 0.00 15.10 9.32 3.53 3.89 0.00 0.00 0.00 4.94 8.90 0.00 0.00 4.85 0.00 5.69 0.00 0.00 0.00 68 E9a_E10a KnownJunction 0 38.60 3.35 0.00 8.19 3.99 5.79 4.06 1.60 16.81 8.70 0.00 0.00 0.00 2.35 0.00 0.00 0.00 4.93 7.72 0.00 35.27 109.91 124.03 69 E10_Aa NovelBoundary 0 0.00 6.58 1.36 11.19 0.00 0.00 4.50 2.55 4.48 2.04 0.00 12.60 0.00 4.47 0.00 3.59 14.12 2.32 0.00 8.95 0.00 2.94 0.00 70 ER10a ExonRegion 0 15.84 12.20 5.80 11.11 4.48 7.53 4.11 4.29 14.71 5.69 0.00 0.00 1.83 2.30 0.00 1.41 3.13 3.23 5.38 2.58 38.90 136.03 137.90 71 E10a_E11a KnownJunction 0 25.04 10.06 1.71 3.26 3.74 5.00 3.89 0.00 10.30 8.86 0.00 0.00 0.00 9.54 0.00 0.00 0.00 2.16 3.95 0.00 41.21 126.57 165.01 72 Ix Intron 0 3.42 16.64 9.58 12.87 8.33 2.64 5.95 7.27 11.98 4.92 0.22 0.00 4.37 3.39 4.53 1.37 6.09 4.19 3.30 10.54 1.27 4.56 5.08 73 Ix_AR1 ActiveIntronRegion 0 4.22 21.40 10.99 14.21 11.75 3.45 6.64 7.64 14.09 6.04 0.40 0.00 2.78 3.60 4.49 1.73 6.15 2.12 2.67 13.93 1.38 4.12 3.49 74 E11_Aa NovelBoundary 0 0.00 25.13 6.21 16.31 4.33 5.11 10.42 8.05 10.36 8.41 0.00 0.00 0.00 14.72 14.59 4.19 0.00 21.06 30.49 15.34 0.00 0.00 8.28 75 ER11a ExonRegion 0 18.67 23.38 8.73 11.54 3.71 7.41 2.94 10.46 19.13 7.54 0.00 0.00 1.08 3.28 2.62 2.18 2.76 7.04 7.19 8.08 37.26 96.09 129.61 76 E11_Da NovelBoundary 0 2.82 29.80 10.41 13.52 20.80 11.24 14.31 16.55 19.01 5.24 0.00 0.00 0.00 17.95 20.40 4.36 18.70 23.13 36.99 18.54 0.00 0.00 7.68 77 E11a_E12a KnownJunction 0 16.74 0.00 3.96 5.73 11.80 5.17 2.25 12.12 17.33 4.67 0.00 0.00 0.00 4.59 0.00 4.27 0.00 2.28 9.41 0.00 35.09 87.69 132.14 78 Ix Intron 0 4.60 21.63 9.43 18.96 12.08 6.98 5.86 7.63 9.61 5.83 0.00 0.75 3.71 1.84 3.90 1.09 1.77 5.73 4.67 8.94 0.68 3.76 4.72 79 Ix_AR1 ActiveIntronRegion 0 0.00 5.23 2.10 10.71 2.68 9.17 0.19 1.48 6.18 5.73 0.00 0.00 4.69 4.87 5.80 2.97 0.00 3.70 19.11 3.95 2.20 2.08 3.36 80 Ix_AR3 ActiveIntronRegion 0 6.00 28.00 14.39 29.10 10.10 7.54 8.65 11.18 13.48 6.37 0.00 1.62 2.58 1.52 3.91 1.92 2.16 9.50 6.08 10.60 0.92 5.77 6.88 81 Ix_SR3 SilentIntronRegion 0 8.42 39.15 8.98 30.30 19.26 9.07 8.80 10.24 9.73 6.18 0.00 0.00 0.00 1.37 8.29 2.09 5.88 4.41 0.32 12.42 0.00 4.56 4.87 82 Ix_AR4 ActiveIntronRegion 0 7.80 30.43 12.69 18.15 25.62 8.45 8.15 8.50 13.32 8.56 0.00 0.43 5.40 3.51 5.67 0.72 1.99 6.24 6.91 13.80 1.06 4.48 4.96 83 Ix_SR4 SilentIntronRegion 0 5.96 18.63 7.10 9.11 17.21 5.96 1.44 1.85 4.21 4.87 0.00 0.00 2.77 1.55 3.03 0.00 0.00 0.71 0.00 17.75 0.00 2.84 0.00 84 E12_Aa NovelBoundary 0 18.74 39.01 10.82 28.93 8.32 29.93 20.05 20.29 7.15 7.52 0.00 0.00 0.00 5.12 11.25 4.36 4.77 10.16 4.05 8.63 2.90 6.25 0.00 85 ER12a ExonRegion 0 27.69 18.11 15.73 19.45 17.18 6.59 8.57 14.73 28.96 9.86 0.00 0.00 5.38 1.29 6.46 0.42 3.76 7.96 8.06 7.82 42.76 139.17 147.13 86 E12_Da NovelBoundary 0 3.11 15.79 15.20 29.63 7.05 5.22 3.67 13.10 15.83 4.51 0.00 0.00 0.00 5.30 0.00 0.00 4.30 1.70 4.80 16.94 3.15 0.00 0.00 87 E12a_E13a KnownJunction 0 10.59 2.70 4.52 4.06 3.48 2.84 0.00 4.64 13.92 5.45 0.00 0.00 6.82 0.00 0.00 0.00 0.00 0.00 7.53 5.43 36.70 139.80 84.77 88 Ix Intron 0 2.73 24.71 7.23 15.14 19.71 13.16 8.65 12.57 17.28 5.03 0.00 0.80 5.05 2.02 3.03 0.82 2.43 5.59 4.11 11.56 0.00 0.77 1.89 89 Ix_SR1 SilentIntronRegion 0 2.74 24.84 7.27 15.22 19.81 13.24 8.70 12.64 17.38 5.05 0.00 0.80 5.08 2.03 3.05 0.83 2.44 5.61 4.12 11.62 0.00 0.77 1.90 90 E13_Aa NovelBoundary 0 6.52 31.44 20.55 21.61 36.67 12.72 11.79 19.92 25.29 5.99 0.00 0.00 6.33 4.71 0.00 0.00 0.00 1.62 8.75 20.39 0.00 3.12 0.00 91 ER13a ExonRegion 0 18.84 23.72 14.71 27.55 24.78 17.71 9.41 17.67 38.23 10.77 0.00 1.71 7.02 2.40 4.40 0.68 9.39 3.45 7.03 22.20 13.64 135.39 53.19