Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 DCP2 Gene 0 71.38 106.56 61.88 57.05 102.07 62.52 111.25 71.08 51.35 69.83 70.30 143.13 100.47 108.48 49.80 64.28 87.80 105.81 45.04 99.53 13.09 46.28 34.31 2 389063 Transcript 1 15.39 44.55 27.83 16.51 58.01 33.16 91.53 33.11 33.21 49.78 95.09 172.85 192.53 185.31 13.73 103.70 134.17 192.53 40.19 107.44 15.90 35.51 45.79 3 389064 Transcript 0 0.00 2.50 0.00 2.06 0.00 0.00 3.67 0.00 3.27 0.00 4.95 0.00 6.49 21.78 0.00 3.50 0.00 6.63 0.00 3.26 5.56 0.00 0.00 4 ER1a ExonRegion 0 15.48 9.89 6.34 2.30 8.01 12.38 22.64 3.67 5.30 9.64 22.31 6.00 9.17 27.35 9.59 28.44 37.27 49.15 14.16 26.71 14.25 7.25 11.62 5 E1a_E2a KnownJunction 1 0.00 19.34 12.00 7.49 3.99 0.00 8.13 10.80 16.67 16.28 58.65 43.96 33.44 62.10 0.00 38.20 55.54 122.20 31.25 63.34 26.19 4.90 21.08 6 I1_SR3 SilentIntronRegion 0 19.05 4.07 5.15 9.54 9.10 1.83 18.01 6.57 4.08 1.15 3.87 4.33 9.85 2.92 5.80 8.62 9.57 1.85 0.00 6.81 2.20 2.08 0.29 7 I1_AR4 ActiveIntronRegion 0 17.64 1.69 7.20 8.92 6.69 3.29 15.72 4.68 3.04 1.39 2.26 4.69 3.52 1.35 4.59 5.94 4.40 1.85 0.00 11.79 0.28 1.48 0.00 8 I1_AR5 ActiveIntronRegion 1 16.40 8.98 39.69 22.52 13.13 4.17 20.49 10.15 4.41 9.74 37.26 26.13 18.71 25.14 34.30 23.85 23.32 6.69 12.08 10.70 4.49 8.23 3.52 9 ER2a ExonRegion 1 9.11 19.15 22.37 13.04 25.81 21.84 41.78 23.75 21.83 31.60 82.44 58.33 64.43 102.26 20.44 73.64 102.02 146.63 32.42 92.24 24.53 21.93 23.15 10 E2a_E3a KnownJunction 0 8.59 57.16 24.16 19.24 44.40 32.94 78.92 21.97 32.46 37.50 112.03 123.49 95.29 105.60 23.49 69.13 97.80 119.51 32.00 107.13 24.59 27.56 36.54 11 I2_SR1 SilentIntronRegion 0 17.02 9.34 12.69 9.94 8.55 1.40 12.03 4.77 3.55 3.60 1.28 3.63 7.16 1.85 5.80 3.92 4.94 1.96 3.23 5.02 0.34 0.42 2.68 12 ER3a ExonRegion 1 15.10 49.12 23.56 20.11 27.76 24.50 67.50 33.97 26.37 46.82 121.59 133.47 113.81 139.94 17.79 63.58 154.39 97.05 42.50 122.47 13.91 38.59 26.50 13 E3a_E4a KnownJunction 1 35.56 75.05 42.52 22.94 29.88 9.43 49.77 29.20 25.67 57.32 130.77 150.50 48.37 97.83 0.00 72.55 144.46 103.38 16.57 125.41 2.41 27.68 30.73 14 ER4a ExonRegion 1 35.02 46.01 22.32 23.77 46.62 24.40 55.15 34.99 42.59 55.91 133.62 216.91 184.19 147.19 19.02 98.20 153.91 107.71 25.90 121.06 5.45 35.61 44.26 15 E4_Da NovelBoundary 0 13.26 5.92 8.60 18.88 25.04 2.90 18.06 8.30 4.11 8.11 0.00 6.30 6.66 2.47 8.90 4.36 8.88 6.26 0.00 8.50 5.50 2.63 8.19 16 E4a_E5a KnownJunction 1 10.30 54.79 16.23 23.31 10.61 24.59 61.21 39.72 51.24 55.44 119.93 245.93 312.80 133.79 19.41 109.29 178.31 114.66 34.35 131.48 5.93 38.70 69.83 17 I4_AR2 ActiveIntronRegion 0 44.20 8.82 8.13 7.49 16.33 0.78 17.39 11.26 6.02 7.53 2.06 7.84 18.84 2.77 4.94 4.34 6.12 7.19 10.20 11.56 3.80 2.68 8.59 18 I4_SR5 SilentIntronRegion 0 15.54 10.16 12.12 11.42 16.51 2.86 22.75 13.27 6.04 6.54 2.57 8.33 31.63 2.28 5.52 3.71 7.48 5.46 2.24 13.12 1.55 3.25 4.59 19 E5_Aa NovelBoundary 0 10.52 21.64 6.89 19.88 11.04 0.00 23.23 12.69 7.64 5.32 5.21 6.00 21.91 3.00 0.00 0.00 17.67 3.94 8.47 21.60 0.00 2.76 0.00 20 ER5a ExonRegion 0 17.51 73.49 25.64 32.99 38.06 30.42 79.50 47.69 60.71 64.44 131.03 274.20 191.74 142.87 31.84 95.26 145.02 115.00 41.72 125.48 10.92 61.42 48.56 21 E5a_E6a KnownJunction 0 22.00 79.13 26.17 52.41 67.15 26.75 112.22 67.65 72.51 87.73 109.98 269.19 293.65 156.28 33.38 108.86 179.24 187.37 29.37 117.22 11.06 50.52 35.51 22 ER6a ExonRegion 0 19.07 79.85 32.75 36.56 44.04 27.30 96.67 52.13 50.86 63.27 133.44 268.27 273.23 160.49 39.72 147.74 165.04 191.15 65.23 123.63 21.43 68.77 64.84 23 E6a_E7a KnownJunction 1 6.52 50.65 22.80 21.38 23.51 29.13 84.35 27.60 39.70 56.73 77.76 166.55 186.03 127.26 4.45 51.18 163.16 127.14 26.73 71.08 26.63 37.90 43.62 24 ER7a ExonRegion 1 32.14 75.77 31.61 31.96 42.29 36.23 83.70 34.27 42.57 51.27 101.89 170.57 177.57 166.77 24.18 88.26 156.15 202.48 39.91 98.46 27.42 32.16 49.27 25 E7_Da NovelBoundary 0 3.78 12.76 4.44 4.13 3.99 0.00 6.27 4.11 0.00 4.78 0.00 0.00 0.00 2.12 0.00 4.36 8.98 9.45 0.00 2.88 0.00 0.00 12.55 26 E7a_E8a KnownJunction 1 39.27 107.35 32.67 27.60 70.20 36.00 56.79 34.50 37.35 31.54 89.86 195.51 331.31 176.35 25.34 149.19 112.58 247.19 73.23 94.98 23.23 45.56 58.56 27 E7a_E9a NovelJunction 0 0.00 2.57 2.96 0.00 0.00 0.00 1.85 0.00 0.00 1.56 7.11 5.85 6.82 2.24 6.30 0.00 8.51 16.87 0.00 0.00 0.00 0.00 3.50 28 E8_Aa NovelBoundary 0 45.34 12.17 8.37 8.86 6.88 0.00 13.87 17.70 5.56 7.63 0.00 18.91 13.64 7.48 10.38 8.37 3.93 7.25 0.00 17.58 3.15 0.00 4.35 29 ER8a ExonRegion 1 21.40 64.79 30.32 22.08 46.26 28.49 80.16 41.08 37.57 44.27 79.56 139.63 181.81 151.60 21.59 83.85 113.35 180.88 46.80 94.92 26.91 22.41 41.35 30 E8a_E9a KnownJunction 1 22.30 60.71 32.64 20.24 80.98 39.86 90.98 29.41 30.73 36.00 64.96 148.40 188.62 159.28 9.52 75.28 112.20 133.85 34.64 78.30 14.76 26.33 30.30 31 E8a_E10a KnownJunction 0 0.00 2.50 0.00 2.06 0.00 0.00 3.67 0.00 3.27 0.00 4.95 0.00 6.49 21.78 0.00 3.50 0.00 6.63 0.00 3.26 5.56 0.00 0.00 32 ER9a ExonRegion 1 18.10 49.06 36.28 21.16 69.80 34.30 93.79 43.15 35.61 61.91 101.49 190.08 192.07 194.40 21.03 120.89 140.52 242.99 51.66 118.48 19.16 37.84 46.87 33 E9a_E10a KnownJunction 1 5.78 23.88 14.58 8.12 23.26 25.33 89.83 26.78 33.30 51.44 118.82 180.06 196.90 202.25 10.63 114.93 149.79 200.76 34.26 125.53 13.78 42.37 60.18 34 ER10a ExonRegion 1 18.03 42.86 25.76 11.19 31.95 35.76 72.67 33.90 36.89 53.22 131.14 191.75 174.43 247.77 23.38 116.54 187.07 190.60 47.66 128.15 37.55 39.75 54.55 35 E10a_E11a KnownJunction 1 14.22 53.41 29.98 14.02 39.05 39.41 59.53 38.65 37.15 48.62 139.19 262.89 209.73 172.29 26.70 115.87 197.10 160.09 31.34 137.87 32.19 26.39 40.55 36 ER11a ExonRegion 0 80.25 116.67 68.39 63.34 113.53 68.81 119.29 77.76 54.49 74.28 66.35 142.75 94.20 105.07 54.58 61.18 82.10 100.38 46.30 100.17 12.13 48.46 33.90