Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 ELL2 Gene 0 105.34 5.13 10.09 7.71 36.45 19.83 16.75 11.91 33.47 8.16 433.48 885.53 403.33 227.87 275.04 263.76 252.27 10.70 1.99 3.36 52.93 358.82 159.33 2 431061 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3 237853 Transcript 1 50.81 3.64 8.00 4.12 22.73 12.88 10.36 10.93 40.38 8.05 774.89 1412.82 723.90 422.75 253.88 546.64 519.34 17.76 1.68 5.34 115.36 463.54 252.23 4 ER1a ExonRegion 0 6.38 0.62 1.31 0.30 2.59 2.09 2.04 1.68 6.69 0.62 123.13 48.23 43.21 61.91 68.84 92.63 97.36 4.38 1.96 0.66 31.01 63.61 66.29 5 E1a_E2a KnownJunction 0 16.67 0.00 5.56 2.06 25.47 0.00 0.00 7.35 16.84 1.67 460.91 391.63 242.19 259.40 194.45 550.71 335.86 25.87 0.00 5.62 62.70 220.07 323.10 6 I1_AR2 ActiveIntronRegion 0 6.53 0.41 3.06 0.57 2.10 0.80 1.99 1.74 10.59 1.16 3.57 28.76 18.74 1.27 15.13 14.21 16.84 4.92 1.32 0.43 8.17 4.12 45.20 7 I1_SR2 SilentIntronRegion 0 7.64 0.00 3.84 0.28 0.00 0.00 2.42 5.67 13.38 1.64 7.26 32.26 12.53 3.45 20.77 20.95 16.58 5.05 1.79 0.00 12.66 2.39 59.74 8 I1_AR3 ActiveIntronRegion 0 9.63 0.00 3.76 0.00 0.00 0.00 0.68 5.66 10.05 1.15 4.73 44.49 15.04 1.18 8.20 20.29 13.20 4.27 0.55 0.00 4.41 6.18 61.97 9 I1_AR4 ActiveIntronRegion 0 9.32 0.00 4.50 0.00 0.00 0.00 0.00 5.51 11.05 1.15 7.84 48.91 18.13 2.28 12.15 20.08 12.58 5.14 0.00 0.00 6.55 6.31 60.16 10 I1_AR5 ActiveIntronRegion 0 5.11 0.00 2.76 0.00 0.00 0.00 0.00 6.48 10.50 1.15 10.95 42.57 12.51 3.11 30.22 18.33 12.65 2.31 0.00 0.00 8.63 3.30 46.25 11 I1_AR6 ActiveIntronRegion 0 5.11 0.00 1.76 0.14 0.88 1.45 1.83 3.56 10.01 0.47 3.77 22.20 10.77 1.46 10.17 16.22 15.07 3.64 0.63 0.28 7.29 3.30 37.77 12 I1_SR3 SilentIntronRegion 0 4.65 0.00 3.15 1.10 1.47 0.00 3.08 2.69 9.53 0.47 3.09 31.42 13.26 2.21 10.79 22.67 16.15 6.52 0.00 0.58 7.86 1.55 40.59 13 I1_AR7 ActiveIntronRegion 0 10.58 0.00 6.13 0.00 0.00 0.00 3.97 1.73 9.00 0.00 3.87 31.54 35.51 1.86 8.70 25.90 13.20 3.70 0.00 0.00 14.80 4.17 41.53 14 I1_SR4 SilentIntronRegion 0 12.35 0.00 5.92 0.00 0.00 0.00 3.97 1.73 9.06 0.00 4.51 25.98 35.96 3.25 8.70 29.23 14.85 3.70 0.00 0.00 15.79 4.17 40.62 15 I1_SR6 SilentIntronRegion 0 13.40 0.34 3.77 1.61 4.04 0.27 2.23 3.80 11.03 0.65 3.13 65.93 27.00 1.46 9.67 13.21 10.80 1.18 1.25 0.79 5.78 5.55 32.16 16 I1_AR10 ActiveIntronRegion 0 26.22 0.50 10.23 0.74 7.35 0.77 3.47 5.63 9.79 1.00 6.92 45.82 47.21 1.24 18.13 22.54 11.76 1.90 1.00 0.90 5.18 6.53 45.05 17 I1_SR7 SilentIntronRegion 0 37.84 2.27 8.58 0.84 7.66 1.78 3.47 6.31 11.21 1.50 3.70 63.56 32.84 0.52 24.19 21.08 11.68 2.19 1.41 0.39 4.41 7.85 40.94 18 I1_AR11 ActiveIntronRegion 0 58.61 3.56 15.61 3.50 15.01 1.14 4.13 9.57 11.38 0.43 2.12 50.32 26.37 0.84 30.22 15.43 8.85 2.45 0.00 0.51 3.57 7.88 30.53 19 I1_SR8 SilentIntronRegion 0 145.90 0.00 2.45 0.00 0.00 0.00 0.00 2.07 0.16 0.00 2.58 13.85 11.26 0.00 10.83 0.20 8.36 0.00 0.00 0.00 0.00 5.56 7.83 20 I1_AR12 ActiveIntronRegion 0 135.51 2.38 16.56 3.96 10.63 0.00 4.61 13.93 11.49 1.94 4.08 53.26 42.41 1.93 33.51 11.81 7.39 1.32 0.47 0.00 1.29 9.18 23.64 21 I1_SR9 SilentIntronRegion 0 389.16 2.94 10.69 5.75 18.33 0.00 4.17 16.16 16.58 4.31 4.65 106.47 65.75 3.67 50.66 14.09 4.83 3.59 0.00 0.00 0.57 7.87 26.54 22 I1_AR13 ActiveIntronRegion 1 128.82 7.57 8.92 4.84 11.07 0.00 7.44 10.19 15.20 3.05 5.40 66.58 83.94 2.18 52.62 8.61 2.28 0.00 0.00 0.00 2.20 12.00 22.28 23 ER2a ExonRegion 0 12.88 0.30 4.85 1.19 32.95 23.23 7.61 8.97 14.02 4.56 653.08 513.76 329.18 283.81 158.72 425.88 398.45 33.99 2.92 6.07 121.11 291.35 258.18 24 E2a_E3a KnownJunction 0 7.56 0.00 5.06 0.00 68.93 88.76 28.09 10.19 15.94 8.14 735.08 586.99 451.43 367.30 269.24 609.33 388.12 32.38 9.60 9.33 158.21 403.35 395.91 25 E2a_E4a NovelJunction 0 0.00 0.00 0.00 0.00 8.15 0.00 0.00 1.97 3.10 0.00 16.53 31.51 43.02 19.54 4.70 7.95 22.35 2.57 0.00 0.00 2.97 11.76 0.00 26 E2a_E6a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 3.04 0.00 20.64 6.30 6.82 13.89 0.00 8.63 13.00 0.00 0.00 0.00 0.00 2.82 0.00 27 I2_AR2 ActiveIntronRegion 0 15.44 0.00 2.28 0.21 0.77 0.00 4.38 3.78 1.22 0.00 10.63 68.77 55.07 4.96 23.26 28.74 45.30 4.65 2.81 1.93 13.41 4.91 15.90 28 ER3a ExonRegion 0 12.06 3.32 5.77 1.85 14.19 14.26 9.12 8.60 26.03 7.66 611.35 644.66 338.03 383.33 210.91 422.11 399.65 19.36 2.85 3.80 114.68 337.21 242.83 29 E3a_E4a KnownJunction 0 7.19 0.00 4.85 4.10 7.56 11.24 1.99 9.12 22.19 6.26 572.51 576.34 353.39 284.83 188.64 325.47 423.00 21.56 0.00 0.00 121.89 294.84 166.20 30 E4_Aa NovelBoundary 0 10.59 0.00 3.61 1.96 0.00 0.00 1.72 4.60 7.18 0.00 9.42 69.62 40.26 2.47 0.00 11.79 31.60 4.31 0.00 0.00 19.95 21.62 35.85 31 ER4a ExonRegion 0 26.88 1.70 8.77 6.97 12.26 3.83 8.95 10.42 44.92 10.11 723.32 902.42 505.57 436.64 227.42 525.23 500.77 31.39 5.84 8.99 125.25 398.74 276.42 32 E4_Da KnownBoundary 0 66.16 5.59 12.95 11.95 3.48 8.01 19.78 10.31 73.90 18.88 1294.75 1272.11 676.42 695.34 360.47 719.64 911.27 26.16 4.33 10.99 177.36 443.27 415.89 33 E4a_E8b KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 34 ER4b ExonRegion 0 39.97 7.33 4.90 6.59 12.94 5.14 10.01 10.91 42.91 10.32 797.91 1269.67 536.12 502.33 272.43 503.75 570.24 20.81 0.78 4.39 160.69 323.70 254.38 35 E4_Db NovelBoundary 0 3.19 0.00 8.66 0.00 0.00 4.66 4.50 1.73 6.19 1.67 44.01 119.74 32.79 12.89 6.30 24.52 21.69 1.95 0.00 0.00 14.46 33.43 66.75 36 E4b_E5a KnownJunction 0 24.00 0.00 3.31 2.96 12.14 8.35 3.71 12.24 25.14 6.45 534.40 859.93 296.90 260.82 185.43 275.48 382.70 15.92 0.00 0.00 108.79 209.72 137.78 37 I4 Intron 0 18.07 0.91 6.18 1.21 1.55 1.41 3.43 3.56 14.21 0.79 28.68 86.39 56.26 16.77 17.58 26.26 37.68 5.62 0.72 1.01 11.26 49.32 32.53 38 I4_AR2 ActiveIntronRegion 0 7.00 0.39 2.72 0.82 1.14 0.00 2.93 2.70 16.65 0.27 27.35 130.28 75.32 14.54 14.26 17.57 33.36 2.65 0.00 1.15 7.92 51.25 38.92 39 I4_AR3 ActiveIntronRegion 0 2.28 0.00 8.25 0.00 3.46 2.40 2.51 4.12 24.80 1.12 27.21 159.41 99.75 24.49 20.94 27.82 35.34 2.63 0.00 2.97 6.50 68.46 42.77 40 I4_AR4 ActiveIntronRegion 0 2.68 0.00 11.03 0.00 2.68 0.00 1.32 0.00 22.23 0.00 34.79 101.31 72.23 21.87 13.15 21.40 44.89 1.85 0.00 0.43 3.97 53.34 16.84 41 I4_SR3 SilentIntronRegion 0 6.86 0.27 3.28 1.00 1.21 1.19 3.63 2.80 11.07 0.99 28.59 90.12 60.72 16.88 13.22 24.37 42.24 4.15 0.67 0.88 10.63 42.80 30.03 42 I4_AR5 ActiveIntronRegion 0 39.01 2.00 8.79 1.49 2.08 1.97 2.92 4.13 18.14 0.49 31.18 67.46 39.42 16.68 22.74 32.10 37.12 8.99 1.09 1.08 14.65 51.76 38.37 43 I4_AR6 ActiveIntronRegion 0 15.88 1.15 16.45 2.07 1.52 1.25 4.80 7.44 16.51 0.77 24.20 111.66 80.75 18.13 27.09 21.24 22.31 4.11 0.36 1.21 6.24 81.36 23.59 44 E5_Aa NovelBoundary 0 10.82 0.00 17.30 3.43 3.90 13.23 0.00 1.68 31.83 1.21 39.17 141.95 118.34 41.91 14.34 27.77 38.62 4.31 4.42 0.00 17.42 59.40 65.81 45 ER5a ExonRegion 0 57.09 2.92 12.35 3.57 26.52 13.73 12.50 16.89 48.98 9.34 830.40 1254.70 600.83 424.66 235.85 513.64 569.42 28.56 5.33 6.47 148.54 404.44 252.24 46 E5_Da NovelBoundary 0 13.63 0.00 11.41 0.00 0.00 14.14 0.00 5.05 20.69 2.50 13.42 38.11 19.48 27.90 17.80 19.14 31.88 2.57 0.00 3.13 17.30 3.12 14.43 47 E5a_E6a KnownJunction 0 61.79 3.09 9.25 5.29 42.44 29.93 16.56 17.66 51.42 2.42 965.72 1543.55 610.02 474.66 303.73 587.97 662.18 21.80 4.80 3.26 180.02 542.53 253.61 48 I5_AR1 ActiveIntronRegion 0 8.73 1.04 8.55 1.90 2.62 0.62 2.73 3.70 13.88 0.29 8.51 52.79 26.00 5.97 15.18 7.93 14.00 1.06 0.27 0.63 2.52 17.56 11.94 49 ER6a ExonRegion 0 58.18 8.12 7.08 5.05 26.52 16.74 14.99 15.00 47.18 10.27 962.38 1859.87 932.60 576.93 316.93 752.28 602.08 24.04 1.91 8.65 118.84 586.69 316.31 50 E6a_E7a KnownJunction 0 91.42 6.58 8.43 4.13 19.27 10.56 12.06 2.55 57.64 9.83 1027.89 2656.32 1279.30 501.39 369.74 831.06 659.93 19.44 0.00 10.87 83.03 744.23 335.05 51 ER7a ExonRegion 0 50.48 2.24 12.02 4.74 23.53 7.36 6.17 9.92 47.33 12.06 875.93 1789.00 1048.60 485.00 305.85 685.08 603.50 14.34 1.59 8.27 102.45 646.08 351.43 52 E7a_E8a KnownJunction 0 54.16 0.00 10.61 5.69 23.43 12.27 11.70 16.35 48.38 13.62 860.17 1432.37 931.27 539.41 249.46 616.42 586.35 21.43 0.00 5.56 121.76 634.44 288.36 53 ER8a ExonRegion 0 68.89 6.12 12.07 3.16 40.49 23.79 15.94 7.79 33.59 6.19 894.07 1449.85 1003.32 461.46 299.38 697.72 557.00 11.28 2.35 5.96 129.52 543.60 331.69 54 E8_Ab KnownBoundary 0 66.75 13.29 12.15 11.45 33.11 33.56 7.33 1.77 24.51 7.20 1045.95 845.53 815.69 411.33 224.86 419.63 616.46 4.77 0.00 8.63 141.78 326.68 201.80 55 ER8b ExonRegion 0 75.08 5.65 14.37 7.18 48.09 25.42 15.93 11.67 38.57 9.77 827.05 1178.43 817.85 403.37 299.19 441.96 507.19 9.77 0.42 3.11 87.48 421.79 249.59 56 E8a_E9a KnownJunction 0 33.27 2.30 19.93 10.69 35.06 5.34 18.37 11.58 49.13 17.06 888.22 1891.52 934.84 389.78 388.41 426.73 536.23 2.16 0.00 5.69 88.53 346.95 228.35 57 I8_AR1 ActiveIntronRegion 0 2.35 0.22 0.40 0.00 1.27 0.51 1.57 1.83 5.01 0.42 18.79 98.93 85.60 25.15 7.84 19.61 18.30 1.17 0.00 0.23 3.17 36.02 10.76 58 ER9a ExonRegion 0 80.00 3.53 13.88 8.39 34.78 27.42 22.76 13.72 47.59 19.66 939.93 1436.64 611.10 300.08 264.51 381.64 548.05 4.27 0.20 2.69 80.54 461.04 202.22 59 E9a_E10a KnownJunction 0 144.10 2.96 15.67 10.85 62.39 45.20 26.23 12.73 51.62 25.92 1062.22 2040.21 722.19 506.21 480.75 468.08 692.57 9.41 0.00 2.68 59.24 681.96 261.38 60 I9_AR1 ActiveIntronRegion 0 2.41 1.22 0.01 1.89 2.47 0.53 2.73 0.80 3.60 0.35 42.67 57.52 36.56 24.72 8.17 36.77 30.61 4.11 0.00 0.66 12.10 51.84 20.75 61 I9_SR1 SilentIntronRegion 0 2.97 1.72 1.48 0.83 3.32 5.11 1.58 1.05 4.06 0.00 27.46 110.46 85.30 20.21 7.29 14.92 25.19 2.22 0.00 0.87 2.60 63.27 8.56 62 I9_AR2 ActiveIntronRegion 0 3.08 0.00 0.00 0.00 2.90 1.50 1.26 0.56 5.66 0.00 36.82 128.58 60.07 35.38 14.16 39.73 33.40 1.53 0.00 0.00 13.18 46.69 24.64 63 I9_AR4 ActiveIntronRegion 0 12.85 0.75 1.44 0.45 3.91 2.00 3.40 0.06 7.10 0.51 45.16 82.90 60.90 26.31 17.96 37.57 38.28 1.88 2.45 0.94 12.13 85.15 27.02 64 ER10a ExonRegion 0 183.18 4.02 10.17 9.79 46.76 22.69 17.28 8.63 44.41 16.72 849.75 1563.94 585.03 377.14 364.44 415.68 494.21 15.58 2.83 3.64 75.20 478.17 219.00 65 E10_Da NovelBoundary 0 7.19 0.00 0.00 2.06 7.30 9.77 12.81 4.23 16.03 3.06 107.13 132.79 89.12 58.80 16.19 57.16 57.88 9.99 0.00 0.00 48.06 179.41 48.14 66 E10a_E11a KnownJunction 0 146.25 8.81 8.66 11.39 69.27 19.93 25.53 7.43 37.59 13.62 947.19 1371.45 485.52 427.28 452.32 280.95 510.99 14.26 0.00 5.88 77.47 400.53 214.60 67 I10 Intron 0 10.45 0.96 1.15 1.83 7.66 5.97 4.62 2.12 8.66 2.01 71.84 124.59 64.87 45.70 23.23 47.30 40.12 2.81 0.37 1.00 14.68 135.34 43.51 68 I10_AR1 ActiveIntronRegion 1 7.46 1.25 1.22 1.52 10.02 5.39 5.38 0.86 7.14 2.28 81.50 105.69 70.87 53.76 20.71 60.76 32.94 3.19 2.12 1.18 23.32 143.50 51.02 69 I10_SR1 SilentIntronRegion 1 8.31 0.77 0.30 3.20 12.18 1.59 8.86 1.73 11.60 2.19 88.24 149.90 90.74 42.89 25.69 42.60 40.23 3.62 1.06 2.10 11.24 165.38 35.28 70 I10_AR2 ActiveIntronRegion 1 11.99 1.28 0.75 2.61 8.50 5.90 4.89 2.83 10.90 2.46 86.89 139.68 68.19 53.87 23.51 56.55 51.88 3.50 0.13 1.24 17.03 150.51 50.64 71 I10_SR2 SilentIntronRegion 0 6.61 0.37 2.35 0.36 4.81 8.85 3.33 1.85 4.14 1.39 36.70 91.03 44.69 27.87 20.74 28.87 24.23 1.16 0.00 0.38 8.01 96.32 32.65 72 I10_AR3 ActiveIntronRegion 0 17.41 0.00 1.00 0.00 2.93 2.01 2.18 0.00 6.06 0.00 39.22 128.49 73.83 28.48 31.63 16.30 12.67 1.51 0.00 0.00 6.04 107.36 17.68 73 E11_Aa NovelBoundary 0 30.89 6.12 5.32 1.90 3.82 5.68 4.50 1.93 14.61 6.37 65.75 184.26 101.45 44.32 54.89 38.79 29.36 0.00 0.00 2.88 5.50 199.50 20.83 74 ER11a ExonRegion 0 125.34 10.57 10.10 14.05 79.62 54.65 30.27 12.64 38.86 10.58 1145.14 1798.08 730.08 503.69 498.56 422.77 626.66 12.24 0.00 5.15 82.66 612.46 250.79 75 E11a_E12a KnownJunction 0 135.88 15.26 9.79 13.15 81.15 71.38 37.05 18.40 40.94 9.03 1156.40 2201.82 791.18 452.06 526.49 500.30 563.81 7.05 0.00 3.13 71.66 670.08 236.80 76 ER12a ExonRegion 0 132.73 5.91 10.87 9.52 41.62 22.30 19.73 13.39 33.88 8.24 301.59 814.42 316.45 163.58 296.94 175.21 153.67 8.46 1.80 2.85 30.53 354.93 125.02 77 ER12b ExonRegion 0 2.12 0.00 0.00 0.00 0.00 0.92 0.00 0.00 1.24 0.00 0.00 12.99 0.00 0.81 0.00 2.97 0.00 0.00 0.00 0.00 0.00 0.00 1.47