Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 LNPEP Gene 0 87.84 19.89 21.78 36.18 76.60 34.59 61.28 41.99 55.59 26.91 157.84 267.49 365.35 259.24 151.86 164.27 245.22 44.16 15.87 29.70 26.50 56.33 39.59 2 489981 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 3 231368 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 379870 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 5 395770 Transcript 0 4.48 0.48 0.14 1.43 0.63 0.43 2.66 3.22 0.86 0.94 0.31 18.25 2.42 21.77 8.60 5.11 6.47 1.87 0.25 0.83 0.00 0.00 0.46 6 417755 Transcript 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 7 474122 Transcript 1 2.64 0.32 0.51 1.84 1.49 0.00 8.28 7.06 3.55 0.69 1.30 19.59 23.57 5.22 5.80 5.80 10.13 0.38 0.00 1.15 0.61 1.37 0.41 8 473914 Transcript 0 3.39 0.45 1.25 2.44 0.92 0.00 5.83 3.69 3.17 0.58 5.62 17.61 19.36 3.91 6.31 9.14 12.56 2.95 1.09 0.00 0.00 0.71 0.14 9 ER1a ExonRegion 0 0.60 0.00 0.30 0.51 0.76 2.70 1.51 0.46 1.48 0.85 0.06 0.75 0.00 5.74 0.60 4.37 0.30 5.95 0.64 1.55 0.00 0.71 0.00 10 E1_Ab KnownBoundary 0 0.00 0.00 4.91 1.37 0.00 11.36 0.00 10.06 15.36 1.67 5.26 0.00 0.00 19.84 5.69 20.42 8.42 28.02 4.80 3.26 0.00 5.63 3.33 11 ER1b ExonRegion 0 2.77 1.75 4.01 1.36 2.57 4.44 4.79 5.50 8.32 4.52 24.55 1.90 5.32 50.54 15.81 28.00 43.25 16.46 4.24 9.51 8.70 4.36 6.26 12 E1a_E4a KnownJunction 1 3.78 0.00 1.83 1.33 0.00 5.00 7.82 0.00 20.34 9.13 105.82 18.46 47.72 175.64 19.28 184.57 204.39 51.94 4.80 13.87 51.09 26.58 53.69 13 I1_SR1 SilentIntronRegion 0 19.26 0.57 3.61 3.16 9.81 1.55 6.26 2.00 2.34 0.72 2.18 6.79 6.91 1.74 14.37 8.59 11.66 4.41 0.45 1.80 0.62 0.00 0.21 14 ER2a ExonRegion 0 8.95 0.95 0.29 2.86 1.26 0.86 3.56 6.45 1.72 1.87 0.63 10.40 4.83 14.29 12.74 10.23 12.93 3.75 0.50 1.66 0.00 0.00 0.92 15 E2a_E4a KnownJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 1.77 0.00 0.00 0.00 0.00 26.11 0.00 29.25 4.45 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 16 ER3a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.41 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 17 ER4a ExonRegion 1 8.67 3.54 6.16 6.52 12.42 6.77 21.33 15.92 27.72 7.09 203.35 247.31 384.43 379.46 79.86 237.28 423.47 70.58 11.67 37.76 61.70 38.89 51.05 18 E4_Da NovelBoundary 0 3.78 0.00 1.83 0.00 7.47 10.79 2.25 0.00 3.59 0.00 12.53 31.06 31.65 4.71 20.52 7.86 16.46 2.53 22.12 2.81 0.00 0.00 0.00 19 E4a_E5a KnownJunction 1 21.11 8.68 10.64 7.26 28.44 6.87 41.42 18.03 29.92 18.35 246.01 594.94 910.82 421.22 102.73 345.55 501.92 71.18 13.08 35.86 35.34 73.97 54.12 20 ER5a ExonRegion 1 12.82 7.33 4.55 3.99 19.23 7.35 33.01 19.96 31.54 14.44 229.31 514.90 626.68 382.21 97.27 237.19 480.89 58.20 16.13 49.85 45.75 44.92 58.06 21 E5a_E6a KnownJunction 1 3.41 9.54 0.00 4.99 8.40 2.56 33.43 13.35 30.56 11.66 242.11 610.85 808.06 326.33 63.17 242.59 413.56 37.68 8.85 36.94 50.97 59.34 49.85 22 ER6a ExonRegion 1 5.44 7.01 3.24 2.23 20.94 16.24 32.12 21.68 29.87 12.56 208.28 529.87 606.65 341.40 88.73 215.16 478.48 43.32 10.93 40.07 42.17 35.81 50.86 23 E6a_E7a KnownJunction 1 10.37 5.99 5.74 0.00 11.80 2.50 33.87 13.55 20.28 18.27 231.16 304.60 464.58 348.40 59.58 231.56 366.99 41.91 11.58 37.65 19.40 44.95 43.45 24 ER7a ExonRegion 1 13.73 2.76 3.74 0.54 16.34 5.29 37.22 20.13 27.39 10.63 233.23 453.38 410.75 374.26 72.34 225.88 464.17 41.77 15.19 33.62 44.66 46.63 55.41 25 E7a_E8a KnownJunction 1 21.93 2.76 3.76 3.66 10.53 8.69 19.96 20.25 19.36 8.54 174.15 400.18 237.16 280.54 37.46 195.08 345.77 40.96 0.00 25.06 43.43 33.25 55.91 26 ER8a ExonRegion 1 13.33 6.25 4.92 6.60 20.46 10.25 27.31 16.93 27.51 9.36 194.26 295.07 332.21 351.92 73.28 231.29 435.16 53.17 12.52 30.98 53.46 47.15 51.55 27 E8a_E9c KnownJunction 1 10.15 0.00 6.06 10.09 3.65 19.59 17.09 7.48 30.99 9.72 150.35 323.51 386.34 309.26 74.91 236.69 322.77 33.66 20.24 17.71 23.17 28.41 54.55 28 ER9a ExonRegion 0 2.64 0.32 0.51 1.84 1.49 0.00 8.28 7.06 3.55 0.69 1.30 19.59 23.57 5.22 5.80 5.80 10.13 0.38 0.00 1.15 0.61 1.37 0.41 29 E9_Ab KnownBoundary 0 0.00 0.00 0.00 2.06 0.00 0.00 8.44 3.74 1.79 1.07 2.68 18.01 13.64 9.30 13.35 0.00 13.18 0.00 0.00 2.43 0.00 2.88 0.00 30 E9_Ac KnownBoundary 0 0.00 3.16 0.00 1.27 0.00 0.00 5.70 1.56 2.92 0.00 2.05 12.60 37.17 7.59 0.00 0.00 7.85 0.00 0.00 0.00 0.00 0.00 0.00 31 ER9b ExonRegion 0 1.23 2.20 0.41 2.95 1.34 1.07 9.82 5.91 5.35 2.29 17.88 53.04 66.83 38.30 13.30 21.05 41.54 4.16 1.59 3.01 2.75 5.73 4.16 32 ER9c ExonRegion 1 13.41 4.93 3.86 11.13 11.39 6.78 48.48 9.77 25.39 13.80 189.78 262.72 371.30 331.78 69.71 191.16 365.96 35.55 7.61 25.42 38.01 50.35 40.88 33 E9a_E10a KnownJunction 0 15.11 11.97 5.85 19.78 19.86 10.28 57.99 11.01 31.80 17.73 147.77 391.63 457.28 284.07 91.35 162.69 315.66 49.66 12.89 30.36 14.21 55.05 43.79 34 ER10a ExonRegion 1 14.67 6.64 3.04 14.05 18.32 13.43 52.18 16.46 31.33 18.74 153.79 381.97 520.92 295.04 80.62 178.58 242.08 44.06 14.54 29.10 15.02 50.15 51.91 35 E10_Da KnownBoundary 1 14.08 5.92 3.19 16.88 32.26 15.62 60.24 22.14 29.20 22.73 160.20 471.00 868.29 375.72 69.47 155.00 259.37 29.76 12.61 42.12 11.24 62.52 41.40 36 ER10b ExonRegion 1 16.62 1.23 4.94 11.89 18.64 12.21 52.24 25.70 37.17 20.93 166.07 465.52 744.72 325.86 70.44 183.30 282.25 27.38 8.77 40.60 17.63 61.58 40.54 37 E10b_E11a KnownJunction 1 24.82 0.00 8.43 13.75 32.77 17.49 67.13 23.70 46.53 17.33 134.09 666.97 913.74 336.28 78.13 163.72 316.60 21.22 0.00 55.29 17.17 66.50 26.04 38 ER11a ExonRegion 0 11.00 2.45 4.99 11.91 22.44 15.13 33.99 25.59 40.51 20.35 206.67 519.40 791.37 299.07 91.68 136.29 342.14 28.65 7.14 49.40 22.75 55.50 34.79 39 E11a_E12a KnownJunction 1 16.52 15.92 6.56 7.09 6.62 2.61 60.81 32.24 51.91 15.61 212.79 478.06 729.66 279.83 68.85 114.59 398.04 15.34 22.59 39.63 23.23 42.01 13.06 40 ER12a ExonRegion 1 18.60 6.72 7.31 8.30 16.59 12.77 55.64 21.04 38.04 15.35 208.10 641.03 837.74 315.34 93.45 149.12 386.94 20.41 5.32 35.46 17.92 61.26 28.97 41 E12_Da KnownBoundary 0 18.08 3.22 0.00 3.36 0.00 0.00 13.82 5.09 7.90 0.00 12.79 24.46 19.64 2.12 0.00 8.72 17.11 1.66 0.00 0.00 0.00 0.00 0.00 42 E12a_E13a KnownJunction 1 17.93 2.70 7.81 11.62 14.26 17.72 47.87 20.21 48.76 14.77 208.79 725.79 1131.26 292.25 107.18 164.23 334.36 25.78 13.18 14.25 13.90 35.94 11.69 43 ER12b ExonRegion 0 3.39 0.45 1.25 2.44 0.92 0.00 5.83 3.69 3.17 0.58 5.62 17.61 19.36 3.91 6.31 9.14 12.56 2.95 1.09 0.00 0.00 0.71 0.14 44 ER13a ExonRegion 1 15.67 2.81 9.44 10.28 15.60 15.02 34.56 16.45 47.17 12.18 177.02 885.94 1122.29 346.52 149.17 209.89 294.71 25.81 12.60 40.04 10.23 56.07 21.81 45 E13_Da NovelBoundary 0 3.33 0.00 2.72 19.41 18.76 8.69 4.42 15.69 10.50 9.48 11.48 82.53 109.08 7.42 13.35 7.78 9.16 4.02 0.00 5.75 3.15 2.57 0.00 46 E13a_E14a KnownJunction 1 17.48 3.35 13.42 7.66 24.62 10.96 47.21 15.85 44.13 12.84 220.74 663.67 1153.66 464.42 137.46 240.36 375.22 20.77 14.21 46.28 11.55 57.50 22.45 47 I13_SR1 SilentIntronRegion 0 9.36 3.27 4.99 6.30 5.71 0.41 14.51 10.01 12.28 3.96 8.74 61.42 51.92 12.97 21.73 16.11 42.58 6.19 6.32 7.92 3.26 4.92 1.26 48 I13_SR2 SilentIntronRegion 1 24.49 2.32 4.90 7.01 19.49 0.00 26.29 5.19 4.94 3.44 22.09 21.34 20.10 9.98 30.46 19.11 35.37 4.88 3.19 4.56 4.41 2.08 0.00 49 I13_AR3 ActiveIntronRegion 0 23.75 4.07 4.90 5.00 17.54 0.00 23.68 5.19 4.12 2.29 21.26 34.64 24.49 17.32 28.69 11.89 24.57 2.05 3.19 4.26 4.41 1.62 0.00 50 I13_SR3 SilentIntronRegion 0 13.22 4.25 1.72 11.62 13.20 0.00 18.33 20.23 4.91 9.10 5.23 28.69 40.50 8.56 13.52 6.01 6.54 4.31 0.95 4.95 0.53 4.71 1.32 51 I13_AR4 ActiveIntronRegion 0 21.73 0.00 1.23 16.45 9.63 0.00 15.18 16.94 10.29 11.93 1.93 38.39 59.72 6.17 23.60 3.96 3.30 1.85 3.19 0.00 0.00 7.50 0.00 52 I13_AR5 ActiveIntronRegion 1 26.27 5.07 6.41 15.74 16.48 2.09 24.58 20.97 9.66 7.53 6.58 32.16 65.86 10.64 30.62 15.39 34.80 4.03 4.18 6.15 1.37 4.06 1.83 53 I13_SR4 SilentIntronRegion 0 14.04 2.50 1.91 6.55 17.29 1.14 13.43 16.10 2.38 7.36 4.36 11.99 32.14 13.17 7.89 7.68 13.08 2.10 1.98 1.45 0.00 0.00 0.00 54 E14_Aa NovelBoundary 0 2.89 0.00 2.54 3.70 3.74 0.00 12.28 2.55 6.22 1.24 29.95 30.46 33.93 9.42 9.27 7.86 48.99 14.80 3.95 26.59 6.30 5.76 0.00 55 ER14a ExonRegion 0 16.94 4.50 6.24 9.24 21.93 13.52 45.91 22.81 50.26 14.92 249.86 725.68 973.97 429.61 133.16 253.87 530.33 50.72 21.03 51.63 35.32 59.78 45.50 56 E14a_E15a KnownJunction 1 10.22 3.35 1.33 12.09 15.11 22.37 48.71 9.86 48.23 11.12 236.22 570.49 841.02 405.62 105.45 233.53 487.80 63.09 8.38 36.11 69.01 45.74 47.97 57 ER15a ExonRegion 1 14.13 4.24 2.11 6.65 14.45 11.97 51.22 15.63 42.28 15.65 264.14 632.32 796.44 458.21 117.21 317.51 554.97 94.75 31.24 39.67 68.81 54.11 77.94 58 E15a_E16a KnownJunction 1 17.93 0.00 6.15 4.13 20.63 8.23 29.63 2.14 37.73 22.97 218.90 366.42 665.38 477.90 128.44 297.36 440.30 72.96 0.00 34.20 71.35 33.80 60.86 59 I15_AR1 ActiveIntronRegion 0 14.11 2.20 0.00 0.00 5.80 0.00 22.40 3.46 9.88 3.44 16.43 22.73 32.05 36.27 12.33 35.17 14.58 21.40 7.70 2.48 2.20 0.35 6.61 60 I15_AR2 ActiveIntronRegion 1 54.32 7.91 0.00 0.00 8.03 1.83 28.69 3.46 10.70 3.44 23.84 27.90 48.98 37.35 17.41 80.25 24.21 25.05 18.40 3.31 2.20 2.08 5.87 61 E16_Aa NovelBoundary 0 35.34 2.57 2.90 3.10 10.87 16.81 29.06 9.61 10.76 1.67 8.05 0.00 20.94 22.19 20.40 22.22 57.78 16.50 0.00 3.13 13.59 6.25 0.00 62 ER16a ExonRegion 0 42.43 3.84 11.35 7.51 18.77 12.35 31.27 18.50 41.82 14.27 228.42 379.96 531.70 425.34 128.22 259.92 479.65 104.13 15.91 39.14 70.33 44.42 62.88 63 E16a_E17a KnownJunction 0 23.78 6.31 10.26 3.46 10.44 2.90 29.41 15.77 29.11 4.19 234.64 171.06 355.82 394.14 138.08 225.41 507.62 73.29 14.02 46.79 64.31 21.06 84.08 64 E16a_E19a NovelJunction 0 0.00 0.00 0.00 0.00 0.00 0.00 1.68 2.05 1.33 0.00 13.64 0.00 5.84 12.01 0.00 0.00 3.55 14.43 0.00 0.00 3.15 5.51 4.01 65 I16_AR1 ActiveIntronRegion 0 20.81 2.03 0.00 4.09 8.03 9.17 8.16 5.19 9.06 2.29 5.80 34.64 21.11 19.22 5.80 38.14 40.16 11.09 3.19 4.26 2.94 0.00 2.94 66 E17_Aa NovelBoundary 0 3.78 0.00 0.00 2.06 3.65 0.00 6.71 8.79 11.52 1.10 11.69 6.30 19.64 11.48 4.45 4.36 19.82 6.67 3.86 2.62 11.12 0.00 3.59 67 ER17a ExonRegion 0 26.77 8.99 11.47 10.20 32.34 17.40 51.79 22.84 42.38 11.15 215.30 348.66 455.54 449.07 146.96 259.33 461.72 86.31 22.12 40.99 69.05 47.39 70.95 68 E17_Da NovelBoundary 0 3.41 3.35 1.24 1.60 0.00 0.00 8.44 3.74 9.52 1.21 5.16 0.00 60.39 19.48 22.25 11.28 40.30 20.64 0.00 5.31 8.46 0.00 8.37 69 E17a_E18a KnownJunction 0 31.41 9.60 7.16 12.79 23.77 20.95 50.30 29.66 34.72 8.86 238.06 409.03 457.60 442.94 183.82 214.13 389.81 50.95 20.05 35.99 61.47 36.62 67.35 70 E18_Aa NovelBoundary 0 0.00 3.35 0.00 3.93 0.00 2.21 1.85 0.00 3.50 0.00 5.00 12.60 27.60 9.36 4.45 7.86 8.23 6.96 14.40 5.62 3.03 0.00 0.00 71 ER18a ExonRegion 0 39.43 5.44 7.29 15.13 29.07 14.32 37.26 29.47 43.20 15.46 238.12 384.40 476.09 418.00 163.35 261.13 476.01 60.94 22.37 34.72 54.98 51.81 64.50 72 E18a_E19a KnownJunction 0 69.35 6.25 5.74 11.32 41.51 7.89 47.83 36.06 42.16 19.29 228.95 552.03 581.29 473.84 219.54 409.21 464.14 77.64 30.40 45.13 62.09 68.03 100.39 73 ER19a ExonRegion 0 49.97 6.25 9.10 9.21 33.06 22.32 49.81 28.16 57.21 25.78 272.09 460.45 442.41 488.31 195.06 330.30 511.84 98.79 34.53 40.63 81.08 66.49 59.23 74 E19a_E20a KnownJunction 0 62.09 12.30 5.97 5.33 41.94 48.15 87.84 27.64 69.21 32.34 298.87 506.87 451.43 507.74 209.66 256.77 556.99 98.91 31.44 44.81 84.51 58.48 49.68 75 ER20a ExonRegion 0 37.36 9.37 12.36 9.45 33.51 17.69 44.09 23.59 43.53 15.74 209.51 258.90 401.31 391.13 169.86 219.09 372.02 86.03 17.83 35.82 52.73 44.53 48.91 76 E20_Da KnownBoundary 0 31.04 31.05 4.97 5.26 26.57 14.76 23.94 13.80 44.27 7.74 163.83 287.94 431.63 307.85 115.83 207.47 283.31 53.77 21.55 39.44 46.33 56.89 59.84 77 ER20b ExonRegion 0 23.97 19.28 7.04 11.72 28.63 13.49 32.56 17.46 27.91 12.43 100.75 294.33 399.29 225.68 77.52 105.17 153.26 21.60 5.26 22.68 9.40 45.57 27.68 78 E20_Db KnownBoundary 0 17.63 12.76 8.90 17.88 15.79 13.29 37.85 18.73 29.95 16.44 142.56 272.49 343.48 215.67 101.24 91.43 225.90 13.31 3.76 25.89 12.17 31.35 37.13 79 ER20c ExonRegion 0 136.66 29.91 32.73 56.36 117.85 51.75 84.15 59.92 75.07 38.44 164.85 261.12 360.27 252.26 199.32 167.22 214.26 42.97 19.27 31.23 21.27 71.42 42.18