Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FAM172A Gene 0 44.50 125.23 44.58 55.95 62.50 79.35 50.48 44.96 45.02 58.74 35.66 60.93 46.20 26.39 18.30 20.66 26.23 50.48 56.32 103.31 32.49 67.80 38.36 2 455030 Transcript 0 1.87 0.00 1.83 0.00 1.47 0.00 2.18 1.45 0.00 0.57 0.25 10.10 6.51 0.45 1.12 2.08 1.81 0.02 1.75 3.55 0.00 2.64 0.00 3 265139 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 4 426561 Transcript 0 6.59 22.10 9.76 9.86 0.00 9.71 9.67 11.99 15.25 11.68 4.32 0.00 6.66 10.24 4.45 7.18 3.93 12.44 20.89 16.94 3.15 11.51 23.13 5 395965 Transcript 0 20.74 7.32 5.88 10.63 12.31 6.60 1.85 2.07 5.43 4.59 1.55 2.60 13.13 0.32 8.70 0.00 0.00 0.00 4.46 5.96 0.88 0.00 0.59 6 423975 Transcript 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 7 ER1a ExonRegion 0 13.76 19.69 1.81 1.28 34.30 29.56 33.10 1.87 1.80 1.19 21.57 0.00 8.63 18.22 6.21 15.87 20.99 11.09 16.05 8.68 24.06 5.58 29.19 8 E1_Ab KnownBoundary 1 53.94 65.32 0.00 0.00 142.44 85.97 120.30 0.00 0.00 0.00 63.02 0.00 26.30 74.46 29.30 61.61 71.06 15.13 41.60 28.32 74.26 20.57 98.51 9 E1_Ac KnownBoundary 1 123.65 288.37 24.36 19.08 278.18 263.31 242.01 29.86 24.59 21.97 110.19 0.00 18.99 80.99 53.53 94.76 106.22 157.77 107.30 102.97 142.89 55.23 192.92 10 ER1b ExonRegion 1 76.95 153.17 12.06 10.86 187.91 176.64 168.87 16.45 15.62 12.99 103.19 0.00 21.48 81.57 34.82 80.54 102.22 104.31 77.27 66.92 127.82 36.29 149.96 11 ER1c ExonRegion 0 37.35 99.38 9.76 8.85 70.26 85.66 69.10 13.98 13.68 13.79 31.49 5.82 12.00 23.03 13.13 29.18 38.94 86.98 58.47 56.03 53.29 30.92 66.37 12 E1a_E2a KnownJunction 0 13.93 42.03 7.63 4.93 27.16 38.84 33.12 10.84 9.81 12.28 20.06 6.15 12.66 2.12 4.45 8.72 24.59 5.72 40.19 19.62 51.03 14.76 32.18 13 E1a_E3a NovelJunction 0 3.26 38.55 7.57 5.66 8.15 8.35 10.02 0.00 8.77 9.00 9.69 6.30 0.00 6.95 0.00 0.00 17.02 11.03 9.41 19.75 22.24 14.02 3.50 14 ER2a ExonRegion 1 4.49 33.55 18.76 22.81 21.06 24.03 23.41 20.20 28.02 27.87 44.41 18.96 26.25 36.78 9.92 31.42 37.06 56.36 65.09 69.78 56.53 47.33 77.58 15 E2a_E3a KnownJunction 0 2.96 55.71 18.39 33.10 36.42 25.10 6.67 18.98 48.12 40.80 19.06 37.21 19.32 14.36 14.46 28.45 4.11 59.69 32.66 64.49 17.17 52.17 40.21 16 ER3a ExonRegion 0 16.77 76.96 20.94 36.80 58.53 87.27 72.09 31.94 53.05 51.43 44.29 95.67 82.77 41.35 21.16 35.96 59.22 29.67 44.50 97.93 37.27 70.55 52.72 17 E3a_E4a KnownJunction 0 27.93 119.91 22.97 37.26 72.16 101.93 142.38 33.06 55.09 79.48 62.86 103.53 112.98 69.34 56.49 46.14 47.12 29.31 43.67 99.65 34.35 115.55 75.80 18 E3a_E5a KnownJunction 0 6.59 22.10 9.76 9.86 0.00 9.71 9.67 11.99 15.25 11.68 4.32 0.00 6.66 10.24 4.45 7.18 3.93 12.44 20.89 16.94 3.15 11.51 23.13 19 E4_Aa NovelBoundary 0 0.00 5.79 3.10 5.46 14.77 0.00 0.00 2.09 0.00 4.54 0.00 0.00 22.56 0.00 0.00 0.00 0.00 0.00 4.61 0.00 2.41 0.00 0.00 20 ER4a ExonRegion 0 53.67 130.27 21.06 44.29 116.59 86.21 121.50 36.81 45.22 62.25 60.67 132.07 116.55 33.05 20.94 30.10 54.35 36.72 28.83 104.63 30.66 99.93 44.28 21 E4a_E5a KnownJunction 0 20.52 110.84 15.67 29.97 46.86 33.79 46.42 38.32 35.42 54.56 31.53 98.43 75.32 33.49 25.22 22.39 37.96 26.53 29.08 102.01 15.81 82.91 35.08 22 I4_AR2 ActiveIntronRegion 0 2.51 1.88 0.72 4.61 5.29 0.48 11.71 1.94 0.49 0.68 0.00 5.27 15.09 0.35 1.08 5.88 3.48 4.40 1.95 7.69 2.14 0.00 1.91 23 ER5a ExonRegion 0 39.38 133.69 28.35 50.20 63.41 64.41 47.86 46.01 65.11 85.24 81.50 192.07 95.65 63.44 25.45 43.82 51.91 36.42 45.51 133.59 34.69 107.93 55.08 24 E5a_E6a KnownJunction 0 67.86 121.95 31.22 48.78 49.07 63.49 76.22 44.89 54.72 81.77 113.82 263.79 131.81 70.87 24.85 51.44 55.63 28.93 35.95 141.77 49.05 150.33 91.85 25 E5a_E7a KnownJunction 0 0.00 27.10 10.11 20.38 10.70 2.38 4.11 6.12 21.12 4.38 0.00 18.91 6.66 0.00 4.45 0.00 4.49 4.27 0.00 15.72 0.00 5.45 3.67 26 ER6a ExonRegion 0 34.59 117.65 32.51 45.12 56.19 56.47 55.28 49.99 49.53 85.49 89.56 193.00 170.50 59.42 27.17 44.19 50.01 55.76 66.48 169.89 57.49 132.98 76.25 27 E6a_E7a KnownJunction 0 16.67 135.90 36.93 82.67 23.09 40.66 42.93 62.43 55.38 105.81 75.97 189.21 81.33 76.46 37.21 78.87 41.70 66.41 127.06 193.92 39.97 317.86 125.48 28 E6a_E8a NovelJunction 0 0.00 0.00 0.00 4.06 0.00 8.57 2.12 0.00 7.81 1.50 6.84 0.00 0.00 4.94 0.00 0.00 0.00 1.62 0.00 0.00 6.30 8.08 4.10 29 I6_AR3 ActiveIntronRegion 0 18.89 12.84 16.16 16.54 8.98 1.41 7.53 7.98 4.04 4.67 0.50 3.21 5.64 0.00 3.68 1.53 1.49 2.00 1.74 4.37 0.00 1.31 2.26 30 I6_AR4 ActiveIntronRegion 0 21.45 4.25 13.26 12.14 13.38 0.00 12.16 11.55 4.83 3.86 0.00 4.72 7.46 0.00 2.90 0.00 3.15 3.78 6.37 13.54 0.00 0.00 0.00 31 I6_AR5 ActiveIntronRegion 0 28.46 11.07 6.40 11.66 6.34 0.00 11.18 11.01 4.94 4.12 0.00 8.66 4.17 0.00 0.54 0.00 3.18 5.41 3.89 22.06 0.00 0.00 0.00 32 I6_AR6 ActiveIntronRegion 0 53.62 14.24 14.70 11.58 0.45 0.00 11.92 8.35 4.94 3.44 0.00 0.00 9.38 0.00 0.00 0.00 3.30 5.54 2.65 21.99 0.00 0.00 0.00 33 ER7a ExonRegion 0 38.92 146.26 50.67 77.94 69.80 94.81 65.54 70.08 68.30 102.65 86.29 189.47 166.10 59.91 26.71 40.65 76.95 69.63 70.08 221.37 43.75 164.27 80.56 34 E7_Da KnownBoundary 0 3.63 0.00 5.41 2.03 0.00 0.00 4.50 3.86 0.00 1.64 2.26 18.31 21.91 4.65 0.00 4.19 0.00 0.00 0.00 8.88 0.00 9.00 0.00 35 E7a_E8a KnownJunction 1 33.56 158.39 33.38 42.95 128.69 112.09 55.87 68.47 64.12 99.01 75.33 135.79 100.16 63.28 13.35 7.01 66.29 79.05 86.68 264.43 71.72 150.45 112.34 36 ER7b ExonRegion 0 1.87 0.00 1.83 0.00 1.47 0.00 2.18 1.45 0.00 0.57 0.25 10.10 6.51 0.45 1.12 2.08 1.81 0.02 1.75 3.55 0.00 2.64 0.00 37 E7_Db NovelBoundary 1 2.82 0.00 1.69 0.00 0.00 0.00 0.00 2.18 0.00 0.00 0.00 7.65 28.41 4.71 0.00 0.00 0.00 0.00 0.00 3.07 0.00 3.00 4.35 38 I7_AR5 ActiveIntronRegion 0 19.34 9.09 5.47 10.63 13.08 1.80 7.42 7.34 4.48 3.99 1.04 6.93 7.57 1.31 2.16 1.97 2.03 2.74 2.81 4.23 0.60 2.46 2.60 39 ER8a ExonRegion 0 26.14 139.42 27.55 50.64 64.31 81.91 53.28 61.81 66.27 96.38 93.31 170.00 118.54 59.97 24.71 48.89 86.46 156.07 93.49 199.91 87.12 113.08 97.69 40 E8a_E9a KnownJunction 0 37.04 174.57 42.90 66.96 42.87 58.43 61.21 65.47 78.12 107.85 77.23 112.84 84.90 70.40 36.10 64.51 60.78 182.15 92.33 201.91 64.93 101.46 94.16 41 ER9a ExonRegion 0 25.92 113.53 36.28 44.31 30.78 61.61 41.03 51.40 54.02 83.02 90.47 125.07 77.73 64.59 33.90 51.31 83.09 163.45 97.30 195.33 123.90 105.30 86.17 42 E9a_E10a KnownJunction 0 20.00 90.64 48.02 30.97 73.94 103.52 36.96 58.53 50.55 83.70 81.76 68.27 66.72 63.10 18.54 49.39 86.96 133.19 92.52 154.87 154.32 72.01 58.22 43 ER10a ExonRegion 0 13.57 84.45 28.43 36.97 36.23 72.29 36.45 41.85 44.62 81.44 64.40 80.22 33.38 51.53 19.76 49.37 70.06 190.95 89.08 170.56 113.66 69.10 71.55 44 E10a_E11a KnownJunction 0 0.00 89.19 21.82 41.49 15.28 71.83 34.84 24.15 43.49 78.09 56.38 34.21 13.64 31.49 21.39 47.17 35.34 160.67 73.32 206.01 95.75 67.54 40.89 45 I10_AR4 ActiveIntronRegion 1 1.35 8.13 0.00 4.83 2.68 2.17 1.93 16.03 7.07 5.84 0.00 14.17 65.23 0.00 0.00 11.89 3.30 1.85 0.00 10.83 0.00 0.00 0.00 46 I10_AR5 ActiveIntronRegion 1 3.21 10.46 2.78 6.31 2.33 1.96 5.13 16.37 8.20 7.91 0.00 7.30 28.68 1.14 0.00 1.15 0.66 2.03 2.32 11.49 1.16 0.00 0.00 47 I10_SR8 SilentIntronRegion 0 14.08 12.38 5.62 7.12 8.47 2.83 13.01 8.77 5.75 5.11 0.66 4.89 7.46 0.69 1.50 5.20 4.71 6.74 8.19 12.64 1.95 0.23 2.51 48 I10_AR11 ActiveIntronRegion 0 13.49 10.96 6.40 11.51 11.68 3.19 10.38 7.12 5.67 4.95 0.73 5.81 8.10 0.18 1.43 3.75 2.59 2.49 4.04 6.93 1.02 0.32 3.30 49 I10_AR12 ActiveIntronRegion 0 15.61 22.19 11.74 16.28 15.75 4.75 10.56 9.23 6.33 6.96 0.54 5.37 8.79 0.52 1.51 2.32 2.11 1.83 3.62 9.07 0.16 1.33 0.00 50 I10_AR16 ActiveIntronRegion 1 10.58 1.81 1.23 5.45 7.73 11.41 10.15 3.46 6.18 2.42 1.93 34.15 32.83 0.00 2.90 5.94 6.24 1.85 3.19 8.27 0.00 2.55 1.31 51 I10_AR18 ActiveIntronRegion 0 1.71 1.15 1.91 3.39 1.73 1.13 5.22 2.50 4.64 2.20 1.11 13.44 6.83 1.78 0.33 2.74 1.47 0.21 1.47 5.41 0.51 0.48 1.01 52 ER11a ExonRegion 0 8.88 54.66 28.44 20.28 13.17 48.63 19.81 32.60 39.53 61.26 39.92 35.21 17.02 48.78 24.06 38.16 20.73 133.59 86.78 162.10 105.96 64.46 57.97 53 E11_Da KnownBoundary 0 9.48 39.73 16.38 22.04 7.56 21.92 17.53 7.23 27.78 37.55 24.32 0.00 6.49 50.03 23.61 31.19 26.46 72.58 73.41 127.58 37.25 38.39 55.57 54 ER11b ExonRegion 0 54.01 140.45 53.94 65.41 67.70 86.47 49.28 47.76 45.55 56.07 20.94 36.50 25.89 15.43 16.64 11.47 11.60 33.54 52.45 85.28 16.47 56.54 23.01 55 ER11c ExonRegion 0 20.74 7.32 5.88 10.63 12.31 6.60 1.85 2.07 5.43 4.59 1.55 2.60 13.13 0.32 8.70 0.00 0.00 0.00 4.46 5.96 0.88 0.00 0.59 56 IG18 Intergenic 0 4.69 17.01 2.27 6.03 8.38 14.99 4.05 6.40 8.11 5.24 1.40 2.15 0.83 0.57 0.73 0.36 0.66 1.53 3.21 6.99 0.47 2.18 0.83 57 IG18_AR6 ActiveIntergenicRegion 0 10.58 34.98 3.91 16.92 27.42 45.40 16.65 22.76 28.68 21.93 5.38 9.85 3.54 2.58 2.00 1.94 3.26 5.53 8.03 32.39 2.04 10.68 4.79 58 IG18_SR6 SilentIntergenicRegion 0 13.60 30.41 6.92 22.85 35.46 56.63 15.84 17.45 27.21 24.39 8.27 10.59 2.00 2.71 1.55 3.60 3.44 4.14 17.50 28.89 3.22 5.14 2.70 59 IG18_AR5 ActiveIntergenicRegion 0 16.14 32.07 12.31 23.78 35.51 72.10 22.03 37.76 41.63 24.81 6.97 13.08 4.85 2.56 3.01 0.94 4.53 10.73 24.50 32.91 1.59 9.16 4.94 60 IG18_SR5 SilentIntergenicRegion 0 32.64 76.12 13.22 38.01 47.27 69.74 22.64 35.18 45.27 25.47 9.36 11.22 4.12 3.39 3.38 2.14 2.09 10.28 20.28 38.31 3.49 11.73 5.35 61 IG18_AR4 ActiveIntergenicRegion 0 18.22 68.24 9.53 29.30 39.15 47.80 16.87 29.38 33.74 21.05 5.23 7.25 2.64 2.16 4.86 0.65 0.72 4.75 9.24 22.67 1.20 9.74 2.06 62 IG18_SR4 SilentIntergenicRegion 0 5.91 35.44 3.68 5.90 5.70 9.33 2.06 4.08 8.09 5.26 0.32 0.89 1.93 0.27 0.38 0.25 0.62 1.21 3.46 7.13 0.00 0.88 0.25 63 IG18_AR3 ActiveIntergenicRegion 0 3.86 26.64 2.91 5.45 9.97 12.92 2.53 5.16 7.64 4.37 0.00 2.64 0.00 0.00 1.81 0.00 1.82 0.80 0.00 7.74 0.00 1.54 0.00 64 IG18_SR3 SilentIntergenicRegion 0 4.14 22.87 1.72 3.12 7.11 10.87 1.71 4.17 5.66 3.20 0.22 0.00 0.00 0.00 0.00 0.33 1.11 1.24 1.01 3.41 0.50 1.52 0.66