Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 SLC12A2 Gene 0 26.40 62.07 23.10 25.10 41.78 19.10 29.77 28.94 25.64 29.84 81.13 100.45 84.68 190.58 61.33 51.41 97.73 24.03 19.89 39.28 25.82 130.20 55.17 2 262461 Transcript 0 18.04 8.61 16.38 7.39 12.92 4.71 18.68 7.64 8.12 12.80 64.43 74.28 40.06 110.00 41.85 42.37 79.41 13.94 19.24 8.49 21.22 81.30 44.01 3 343225 Transcript 0 10.08 8.75 0.00 5.43 0.00 7.89 3.71 6.41 25.20 7.23 6.95 12.45 26.30 27.31 13.97 4.36 17.39 0.00 0.00 37.97 0.00 2.94 0.00 4 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.10 0.00 3.64 0.00 0.00 0.25 0.00 0.00 0.00 0.00 0.00 0.00 2.20 0.00 0.00 5 ER1b ExonRegion 1 1.17 1.30 2.24 1.11 0.88 0.97 2.25 3.22 3.62 4.52 31.92 5.78 12.52 100.01 12.68 17.56 43.34 17.71 8.59 13.98 23.76 18.57 23.70 6 E1a_E2a KnownJunction 1 0.00 3.35 4.11 5.49 0.00 14.37 2.25 4.27 15.86 12.09 101.18 42.61 26.78 315.50 22.25 51.18 116.78 52.65 21.37 38.03 70.55 61.97 74.61 7 ER2a ExonRegion 1 3.49 9.07 4.84 6.92 9.12 9.09 15.55 10.67 19.94 17.92 112.32 31.10 73.99 322.98 29.74 83.47 133.71 48.12 22.80 68.83 44.61 80.61 67.20 8 E2a_E3a KnownJunction 1 3.04 15.66 13.96 13.52 7.64 11.41 13.07 12.57 23.81 18.56 147.46 49.67 109.57 349.23 37.46 76.82 116.50 44.31 25.60 55.61 45.84 76.54 118.57 9 E3_Aa NovelBoundary 0 13.34 0.00 1.18 1.53 3.57 0.00 0.00 3.12 2.89 0.00 4.90 30.31 0.00 7.71 4.45 4.36 16.55 0.00 0.00 0.00 0.00 3.06 0.00 10 ER3a ExonRegion 1 8.58 19.91 8.66 5.70 17.15 15.85 25.49 14.83 26.15 19.92 139.07 59.70 85.72 277.62 30.50 88.58 161.74 39.14 29.05 59.49 32.91 108.84 76.39 11 E3a_E4a KnownJunction 1 2.89 9.67 4.91 1.50 26.99 14.37 32.68 14.54 29.02 15.04 119.35 88.68 89.12 295.66 35.97 54.26 121.74 39.46 37.08 95.04 16.87 136.06 40.04 12 ER4a ExonRegion 1 5.27 8.47 6.42 8.96 16.56 8.23 18.40 11.36 27.10 27.42 132.83 106.57 136.79 317.96 37.35 69.29 158.61 50.60 22.93 71.99 20.66 118.50 55.70 13 E4a_E5a KnownJunction 1 3.78 20.92 10.73 9.39 39.81 35.60 39.70 24.19 32.32 30.89 131.35 126.34 106.49 400.03 41.78 89.38 147.73 30.47 17.69 50.94 34.60 168.76 82.80 14 ER5a ExonRegion 1 9.89 18.88 11.35 13.92 23.72 20.01 25.56 17.83 25.25 21.37 124.30 123.54 133.57 327.46 44.64 79.19 158.82 55.60 30.49 65.68 42.67 131.37 83.99 15 E5a_E6a KnownJunction 1 18.08 16.38 5.17 20.24 11.97 18.28 40.06 15.44 17.36 19.10 116.03 172.86 181.32 296.78 42.40 45.63 164.47 46.05 17.51 75.81 49.36 126.94 58.13 16 ER6a ExonRegion 1 11.92 31.20 5.81 14.75 17.79 13.63 23.75 15.04 18.20 22.73 105.63 134.37 167.53 360.73 50.16 70.50 187.53 32.13 21.41 56.81 41.61 143.69 74.32 17 E6a_E7a KnownJunction 1 10.00 29.27 3.37 4.49 0.00 5.05 10.02 17.54 27.55 21.92 102.13 48.02 147.07 349.70 40.55 68.79 132.68 42.99 31.91 72.42 39.54 135.88 73.50 18 ER7a ExonRegion 0 8.84 27.93 7.28 13.32 20.30 15.58 25.80 17.71 19.43 25.59 118.17 162.02 155.85 269.07 42.13 63.78 170.92 42.38 20.89 65.55 33.28 158.75 81.79 19 E7a_E8a KnownJunction 1 23.71 59.20 12.36 22.57 71.14 16.92 75.83 36.68 31.94 38.55 168.94 226.27 315.40 526.64 65.64 104.59 198.69 55.17 33.98 100.86 52.39 255.83 119.34 20 E8_Aa NovelBoundary 0 14.74 2.70 1.24 0.00 0.00 2.84 4.50 0.00 1.19 3.12 0.00 0.00 0.00 0.00 0.00 4.36 9.54 1.66 4.80 0.00 0.00 0.00 0.00 21 ER8a ExonRegion 1 5.79 24.04 13.17 18.10 34.68 17.21 37.45 17.22 23.51 25.10 147.29 165.87 192.14 356.33 41.55 77.09 197.10 48.89 26.15 72.91 44.11 168.03 87.55 22 E8a_E9a KnownJunction 0 10.45 36.97 25.10 6.16 12.99 15.73 32.90 19.14 29.22 15.77 144.98 241.73 132.30 316.62 66.51 87.58 148.95 37.64 59.48 68.71 33.61 207.03 80.75 23 E8a_E10a NovelJunction 0 0.00 3.35 0.00 0.00 0.00 0.00 0.00 0.00 1.16 1.67 0.00 0.00 13.64 25.02 0.00 0.00 4.77 1.78 0.00 3.26 0.00 0.00 0.00 24 ER9a ExonRegion 0 7.15 28.69 10.54 11.16 23.29 14.45 27.34 17.87 22.19 25.07 116.18 156.37 128.56 266.81 48.50 70.74 168.27 38.00 22.90 55.32 45.79 160.23 81.57 25 E9a_E10a KnownJunction 0 9.78 47.16 11.56 16.91 49.24 16.35 41.20 11.54 23.44 26.67 130.14 123.49 189.92 313.44 55.13 107.32 205.42 33.45 9.41 79.83 39.60 163.25 134.87 26 ER10a ExonRegion 1 9.75 15.81 10.92 16.62 32.73 14.03 28.59 18.56 28.90 29.12 151.07 117.72 157.98 306.35 37.26 88.05 212.34 35.12 24.06 62.58 40.68 124.28 86.38 27 E10a_E11a KnownJunction 1 3.26 24.21 2.42 22.21 30.05 22.15 6.45 13.43 28.07 35.11 137.72 39.16 97.07 279.95 39.93 48.19 232.73 19.69 21.27 56.76 18.04 129.75 59.41 28 ER11a ExonRegion 1 4.57 13.37 6.38 19.47 20.49 23.18 25.25 15.46 24.30 25.79 155.38 99.42 107.70 256.10 36.45 75.43 213.64 20.94 24.86 49.92 37.85 130.88 79.02 29 E11a_E12a KnownJunction 0 18.74 17.56 8.01 17.35 28.10 18.63 42.57 26.41 31.19 17.94 185.47 73.22 132.30 286.01 55.88 106.04 217.20 21.68 26.92 45.00 30.33 187.62 100.05 30 ER12a ExonRegion 1 8.65 17.66 11.51 15.07 37.03 9.52 37.39 14.62 24.12 22.17 135.26 127.72 144.97 258.79 37.53 73.30 167.76 22.71 23.86 49.43 32.49 123.18 69.82 31 E12a_E13a KnownJunction 1 19.56 5.46 20.67 17.38 44.06 20.67 28.18 15.03 27.72 27.43 135.61 122.44 186.84 332.98 27.57 85.36 188.41 38.97 33.60 46.98 39.48 121.06 81.44 32 ER13a ExonRegion 0 9.67 15.03 15.44 11.16 31.82 25.31 22.09 21.30 31.60 19.52 133.46 159.89 140.38 275.62 42.07 59.50 151.23 31.57 17.52 50.69 41.98 139.60 55.97 33 E13a_E14a KnownJunction 0 12.67 18.88 16.74 14.45 28.10 23.45 25.08 28.22 23.70 28.85 111.40 108.64 101.29 283.77 42.40 85.19 193.27 36.15 18.26 31.06 38.86 153.27 61.21 34 ER14a ExonRegion 0 9.74 15.86 11.15 13.68 33.91 15.25 28.28 24.96 28.36 23.11 135.60 155.69 117.25 299.14 51.44 81.10 174.55 43.97 28.91 52.52 45.73 138.90 68.97 35 E14a_E15a KnownJunction 0 18.00 20.26 9.82 17.08 44.57 5.34 28.18 30.97 25.17 23.37 149.41 137.74 67.53 323.09 58.84 59.22 211.87 47.55 37.55 60.08 64.87 182.35 63.00 36 ER15a ExonRegion 0 9.74 21.11 10.33 16.91 34.44 10.82 26.31 23.58 25.10 25.40 143.36 100.49 102.66 298.43 72.53 93.68 188.81 60.16 21.18 46.40 57.38 126.53 67.69 37 E15a_E16a KnownJunction 0 10.96 14.73 12.57 10.82 44.65 14.08 25.66 31.91 22.83 32.48 130.82 75.77 100.16 319.44 101.12 109.29 179.62 56.87 29.37 30.23 68.20 125.65 78.88 38 ER16a ExonRegion 0 11.49 16.45 13.73 13.68 30.13 16.91 34.41 23.89 26.60 27.64 136.25 92.66 95.89 350.27 56.34 76.66 177.54 52.51 28.27 49.32 64.62 147.07 93.03 39 E16a_E17a KnownJunction 0 24.37 32.76 12.95 20.71 26.91 17.55 37.58 19.14 29.14 29.79 115.98 56.87 96.58 262.52 55.88 60.33 151.57 56.67 20.52 53.50 39.48 82.60 105.76 40 ER17a ExonRegion 0 16.21 28.05 11.88 15.49 31.77 18.35 38.21 20.62 29.05 23.04 134.48 73.51 116.95 329.70 61.89 99.70 165.70 45.38 25.98 43.99 55.55 137.56 93.68 41 E17a_E18a KnownJunction 0 28.67 21.97 9.55 16.61 38.96 11.30 33.21 26.21 24.22 20.63 114.61 84.93 152.75 320.44 54.52 74.17 127.44 56.00 21.18 54.20 61.16 135.33 78.79 42 ER18a ExonRegion 0 16.93 17.85 11.44 14.23 28.33 15.54 25.13 19.95 21.84 27.11 125.64 108.40 104.89 313.26 55.56 99.80 107.60 39.74 24.29 54.82 39.28 142.32 77.92 43 E18a_E19a KnownJunction 0 24.00 19.21 14.84 17.45 23.26 37.48 46.68 26.21 23.73 31.91 125.77 168.96 108.92 293.25 47.22 108.86 114.26 26.28 35.86 58.48 40.96 145.80 90.31 44 ER19a ExonRegion 0 13.60 21.00 19.54 19.37 40.27 24.96 39.98 23.05 33.66 28.59 97.20 123.01 120.53 281.76 71.52 71.00 111.94 37.02 25.01 49.95 22.20 145.64 79.44 45 E19a_E20a KnownJunction 0 17.41 29.34 24.57 17.85 59.85 42.99 48.36 16.55 34.46 41.18 113.61 120.64 204.05 255.87 118.80 90.40 107.81 31.38 35.20 65.52 11.24 183.88 86.81 46 ER20a ExonRegion 0 17.92 19.35 24.85 21.43 30.43 26.36 32.26 20.06 36.81 32.96 109.58 136.21 121.94 251.49 78.10 72.02 118.49 17.80 28.97 48.01 27.06 152.01 64.58 47 E20a_E21a KnownJunction 0 38.90 15.79 35.07 11.82 23.94 10.39 21.15 19.76 9.29 29.28 92.02 135.49 65.42 227.27 89.50 90.49 98.08 18.20 16.66 7.93 22.18 135.94 63.00 48 E20a_E22a KnownJunction 0 10.08 8.75 0.00 5.43 0.00 7.89 3.71 6.41 25.20 7.23 6.95 12.45 26.30 27.31 13.97 4.36 17.39 0.00 0.00 37.97 0.00 2.94 0.00 49 I20 Intron 0 2.00 4.81 1.58 3.47 5.76 2.84 7.96 2.70 5.32 5.79 12.44 34.57 35.13 36.47 3.61 9.29 11.27 3.36 1.67 7.38 1.04 13.73 4.70 50 I20_SR1 SilentIntronRegion 1 1.67 5.38 0.73 4.40 4.25 3.65 7.13 2.48 6.32 5.71 16.80 30.02 37.74 41.47 2.89 12.05 16.74 4.33 2.11 9.15 1.82 13.25 6.80 51 I20_AR1 ActiveIntronRegion 1 2.12 0.14 2.45 2.73 5.35 3.06 10.68 3.46 2.47 2.52 6.96 50.22 62.22 29.78 0.00 5.94 2.42 3.70 0.00 2.13 0.88 15.14 0.00 52 I20_AR2 ActiveIntronRegion 0 4.83 5.53 2.81 5.00 13.29 4.26 10.59 3.96 4.16 5.03 8.17 39.34 37.47 36.77 2.63 8.08 8.11 3.18 0.24 6.04 0.53 16.67 1.93 53 I20_AR3 ActiveIntronRegion 1 4.23 8.13 1.23 5.45 8.92 0.00 3.31 3.46 2.47 10.32 3.87 36.80 47.68 36.81 5.80 13.37 6.60 2.77 3.19 6.38 0.00 29.17 2.94 54 I20_AR4 ActiveIntronRegion 0 1.56 4.00 3.68 3.17 7.07 1.92 8.15 4.29 5.28 5.06 9.43 43.67 37.21 34.61 5.76 9.60 8.28 2.31 2.14 9.46 0.00 19.26 3.43 55 I20_AR9 ActiveIntronRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 1.77 0.00 0.82 0.00 4.51 25.98 4.69 2.17 0.00 0.00 8.80 2.46 0.00 1.42 0.00 0.00 0.00 56 I20_AR10 ActiveIntronRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 3.22 0.00 1.59 0.98 3.87 24.12 9.38 7.42 0.00 0.00 6.60 1.85 0.00 2.43 0.00 0.00 0.00 57 I20_AR11 ActiveIntronRegion 0 0.00 0.00 4.60 0.00 2.68 0.00 7.94 2.59 3.71 1.15 5.80 31.39 13.48 24.97 0.00 5.57 9.08 3.70 0.00 4.26 0.00 1.56 0.00 58 I20_SR2 SilentIntronRegion 0 1.98 4.57 1.97 1.90 5.97 1.72 9.19 2.37 4.70 7.16 9.18 39.99 32.18 32.28 4.74 6.02 5.49 2.44 1.49 5.02 0.41 13.04 3.30 59 E21_Aa NovelBoundary 0 3.56 15.52 1.83 0.00 18.93 0.00 27.51 0.00 5.06 11.82 29.22 12.15 42.37 41.26 0.00 8.63 12.72 0.00 4.52 11.76 7.91 8.21 8.28 60 ER21a ExonRegion 0 25.35 11.48 25.15 11.90 20.79 10.28 31.06 11.70 15.10 20.81 103.77 115.99 61.65 181.56 68.06 66.01 131.69 25.56 21.10 16.27 34.20 128.05 68.09 61 E21_Da NovelBoundary 1 0.00 21.44 4.79 4.00 11.29 8.12 30.03 7.11 8.22 4.65 12.11 61.67 71.42 27.78 13.47 8.20 8.70 0.00 0.00 0.00 0.00 13.96 0.00 62 E21a_E22a KnownJunction 0 25.93 15.79 21.70 13.22 19.86 2.90 41.20 6.74 16.12 13.91 122.72 119.89 73.21 140.92 51.67 55.37 167.27 25.95 58.45 18.28 47.51 142.49 88.95 63 I21 Intron 0 3.22 9.35 0.81 2.79 11.70 4.49 8.49 3.53 3.68 5.77 10.82 22.55 24.44 35.14 6.03 11.68 9.54 4.20 1.42 5.36 1.31 13.05 3.27 64 I21_AR1 ActiveIntronRegion 0 2.38 8.96 0.71 2.17 11.81 3.91 9.10 1.22 3.04 4.26 9.81 16.26 35.38 25.57 3.92 8.86 8.28 3.14 0.12 7.22 1.11 17.12 3.01 65 I21_SR1 SilentIntronRegion 0 2.29 16.27 7.11 2.32 16.01 6.13 13.89 1.39 6.64 4.87 13.59 37.12 38.67 40.04 4.42 14.71 10.34 7.12 2.09 7.85 0.00 24.42 4.57 66 I21_AR2 ActiveIntronRegion 0 5.56 13.92 1.06 2.01 4.70 4.09 5.91 3.76 4.09 4.69 15.40 32.88 33.71 43.39 8.93 20.90 12.08 7.13 0.00 9.94 1.24 16.12 1.68 67 I21_SR2 SilentIntronRegion 0 2.98 8.45 0.38 2.79 10.40 4.43 7.92 3.57 3.96 6.74 11.68 25.01 19.10 40.88 5.87 12.51 9.40 4.71 1.78 4.05 1.69 9.85 3.69 68 I21_AR3 ActiveIntronRegion 0 4.72 9.07 0.50 4.35 18.82 5.36 9.30 7.81 2.52 5.30 6.03 13.55 18.63 22.93 9.33 7.64 10.75 1.55 2.62 4.50 0.60 13.90 2.42 69 E22_Aa NovelBoundary 0 9.63 9.14 0.00 5.26 18.93 2.10 23.10 12.28 7.23 8.70 20.79 0.00 6.33 26.49 4.45 8.72 22.53 6.59 4.80 10.80 3.15 34.29 8.62 70 ER22a ExonRegion 0 43.28 31.79 28.03 24.90 55.32 37.38 41.33 32.92 40.01 38.05 140.77 149.21 86.86 264.86 88.52 76.43 171.97 22.55 26.49 46.96 43.64 162.95 90.80 71 E22a_E23a KnownJunction 0 37.12 36.57 22.44 37.19 55.43 26.12 62.27 48.22 50.20 48.41 161.25 138.50 94.31 295.66 110.14 128.09 225.06 22.80 9.60 50.05 41.33 186.46 81.44 72 ER23a ExonRegion 0 25.32 39.56 27.65 26.52 51.46 37.92 54.14 40.03 48.33 39.12 126.35 128.42 77.09 254.87 73.46 79.77 193.16 16.83 17.15 45.90 28.22 166.35 82.86 73 E23a_E24a KnownJunction 0 26.67 48.22 24.54 22.34 53.90 24.47 52.60 29.90 53.12 50.04 112.77 102.18 162.98 297.25 108.29 89.38 172.14 13.60 39.34 47.17 33.61 202.50 122.41 74 ER24a ExonRegion 0 36.95 40.06 23.49 27.12 72.28 27.55 56.29 36.81 43.36 53.39 104.82 163.67 110.62 287.62 89.34 90.70 165.92 15.12 31.34 53.46 21.13 201.62 87.46 75 E24a_E25a KnownJunction 0 67.05 34.40 32.02 25.94 60.36 48.10 60.72 44.03 34.46 46.26 161.20 259.58 175.96 315.97 85.79 95.87 231.70 12.19 42.92 96.45 12.85 268.75 59.33 76 ER25a ExonRegion 0 52.10 29.25 31.05 35.70 84.95 33.22 71.77 36.27 36.80 47.50 131.59 208.80 136.49 276.30 109.20 78.15 162.81 36.63 28.41 77.77 32.41 229.46 104.79 77 E25a_E26a KnownJunction 0 66.90 39.53 44.62 43.82 85.82 28.34 96.45 33.56 57.20 46.82 128.30 260.78 219.79 279.30 147.97 93.31 177.28 43.61 25.13 84.95 31.63 233.12 110.03 78 ER26a ExonRegion 0 44.63 50.87 42.26 39.22 86.17 32.31 64.66 41.46 54.73 48.96 196.33 224.81 139.53 333.95 128.42 100.31 187.57 56.27 27.54 65.39 46.08 273.89 109.86 79 E26a_E27a KnownJunction 0 33.86 71.30 48.67 29.63 107.05 32.03 64.79 43.00 50.78 57.89 196.79 261.24 168.01 340.63 113.73 116.38 180.55 58.86 26.64 56.25 67.21 227.60 108.84 80 ER27a ExonRegion 0 42.66 114.12 36.14 38.83 59.52 23.91 34.24 42.65 29.19 38.56 53.23 104.24 73.08 127.44 78.69 37.29 54.35 14.37 18.88 32.33 14.66 147.97 43.46 81 ER27b ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00