Order SeqName SeqType IsAE NBL01_MYCN NBL05_MYCN NBL09_MYCN NBL10_MYCN NBL02 NBL03 NBL04 NBL06 NBL07 NBL08 NBL11_Rel2 NBL11_Rem1 NBL11_Rel1 NBL12_Rel_Left NBL12_Rel_Right NBL13_Rel_Left NBL13_Rel_Right NBL14_MYCN_Met NBL14_MYCN_Pri NBL15_MYCN_Rel1 SKP01 SKP02 SKP03 1 FAM169A Gene 0 6.52 77.27 10.41 36.86 33.30 22.20 8.62 30.46 39.27 45.69 14.22 50.63 50.84 58.58 8.24 16.73 31.76 23.78 17.95 62.90 0.60 1.35 0.93 2 380515 Transcript 0 0.00 2.57 0.00 1.03 0.00 3.66 0.00 1.19 2.92 2.31 3.37 11.85 6.57 12.36 0.00 4.06 9.48 2.26 1.88 8.85 1.39 0.00 0.00 3 389156 Transcript 0 3.20 50.62 5.47 16.32 13.36 21.05 2.37 15.48 31.57 25.93 20.24 57.17 53.36 76.24 5.10 17.60 44.66 21.41 10.31 68.35 0.08 0.41 0.14 4 ER1a ExonRegion 0 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.46 0.00 0.00 1.75 0.00 0.00 0.00 0.00 0.00 0.00 5 E1_Ab KnownBoundary 0 0.00 3.35 1.33 0.00 0.00 0.00 0.00 1.73 2.98 0.00 0.00 6.00 0.00 2.47 4.45 0.00 4.77 4.60 0.00 0.00 0.00 0.00 0.00 6 ER1b ExonRegion 0 0.00 1.46 0.03 0.00 0.00 1.03 0.00 0.62 0.22 0.00 0.25 0.67 0.00 1.92 0.00 0.00 2.37 0.95 0.00 3.38 0.00 0.00 0.00 7 E1a_E2a KnownJunction 0 0.00 3.29 0.00 0.00 0.00 2.90 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 0.00 8.69 0.00 0.00 0.00 8 ER2a ExonRegion 0 1.60 16.63 5.43 5.69 5.59 9.74 0.00 14.26 28.74 13.82 16.37 19.37 15.88 61.75 8.96 25.27 36.73 36.91 9.63 60.13 0.00 0.79 1.11 9 E2a_E3a KnownJunction 0 0.00 17.56 5.59 7.76 19.35 18.63 0.00 6.45 51.33 21.79 34.75 12.60 39.61 87.00 5.07 20.68 73.21 40.62 0.00 112.69 0.00 0.00 0.00 10 ER3a ExonRegion 0 3.24 36.28 5.11 6.28 10.19 25.91 1.35 13.02 35.18 21.50 27.83 17.88 30.63 110.73 5.63 19.50 67.90 30.47 10.67 89.02 0.00 0.00 0.35 11 E3a_E4a KnownJunction 0 0.00 25.72 2.66 9.92 0.00 8.12 0.00 10.88 29.31 17.81 14.37 42.31 33.11 65.22 0.00 20.59 34.13 25.20 11.20 78.75 0.00 0.00 3.67 12 E4_Aa NovelBoundary 0 12.22 6.38 5.47 3.33 0.00 0.00 0.00 3.78 3.59 1.61 0.00 0.00 8.28 0.00 0.00 0.00 4.77 0.00 4.42 8.50 0.00 0.00 0.00 13 ER4a ExonRegion 0 1.97 49.61 3.02 10.95 10.42 13.43 0.79 11.21 37.38 26.21 31.40 55.78 67.24 105.96 5.80 19.04 49.36 25.01 10.52 94.88 0.36 0.00 1.33 14 E4a_E5a KnownJunction 0 3.78 35.39 2.25 14.78 12.99 21.35 0.00 10.19 31.65 21.46 19.22 63.62 39.93 102.48 4.45 19.57 49.84 32.46 3.86 73.31 0.00 0.00 0.00 15 E4a_E6a KnownJunction 0 0.00 5.13 0.00 2.06 0.00 7.33 0.00 2.38 5.84 4.62 6.74 23.71 13.15 24.25 0.00 8.12 17.20 4.52 3.76 17.71 2.78 0.00 0.00 16 E5_Aa NovelBoundary 1 3.19 15.06 0.00 2.06 0.00 0.00 0.00 6.00 4.72 2.58 4.63 0.00 13.31 4.59 0.00 0.00 22.16 1.82 9.60 20.71 0.00 0.00 0.00 17 ER5a ExonRegion 0 5.30 41.74 6.39 12.69 8.74 18.71 0.79 14.60 38.19 26.44 20.22 66.63 73.46 94.74 7.10 24.05 68.95 24.62 9.96 82.66 0.00 0.00 0.00 18 E5a_E6a KnownJunction 0 0.00 62.55 6.53 9.99 4.33 26.46 0.00 16.22 32.26 22.24 36.59 74.27 74.18 83.58 4.45 19.82 49.65 18.74 17.51 84.12 0.00 0.00 0.00 19 ER6a ExonRegion 0 5.39 56.91 8.54 7.94 15.85 18.48 0.75 21.87 52.24 35.68 33.25 102.03 93.28 116.12 8.45 36.74 82.23 41.12 25.70 99.14 2.66 0.59 0.67 20 E6_Da NovelBoundary 0 0.00 9.27 7.75 1.83 0.00 2.73 0.00 0.00 6.19 5.05 0.00 0.00 0.00 0.00 0.00 3.76 14.12 3.56 0.00 9.46 0.00 0.00 0.00 21 E6a_E7a KnownJunction 0 0.00 62.03 5.85 11.05 4.33 18.74 0.00 15.03 50.81 24.23 21.90 111.94 113.79 103.77 0.00 32.47 104.25 34.57 28.80 104.19 3.15 0.00 0.00 22 ER7a ExonRegion 0 6.25 57.82 8.05 6.67 17.30 25.59 0.52 24.37 57.72 31.46 29.82 99.71 124.01 131.73 14.28 37.14 81.14 60.09 29.31 109.45 1.16 0.86 0.41 23 E7a_E8a KnownJunction 1 3.78 63.87 13.81 12.49 20.97 25.21 0.00 37.13 64.55 26.57 36.27 60.47 155.02 141.33 4.45 51.44 115.19 69.43 46.59 126.24 2.35 8.76 3.33 24 ER8a ExonRegion 0 4.20 41.39 6.20 13.99 17.48 24.00 1.12 32.35 70.17 31.43 39.41 109.85 119.16 147.12 14.04 53.24 96.13 63.95 39.01 116.66 0.14 0.90 2.44 25 E8a_E9a KnownJunction 0 5.78 32.43 6.95 7.62 6.62 19.02 1.63 22.51 51.21 22.62 44.06 163.25 126.13 108.07 27.94 46.83 112.01 32.17 38.50 95.94 0.00 0.00 0.00 26 ER9a ExonRegion 0 7.57 37.88 9.25 4.26 14.25 20.36 1.36 35.39 66.17 30.77 47.40 141.68 103.77 112.75 33.29 41.24 99.60 49.61 23.81 105.69 0.00 1.09 0.00 27 E9a_E10a KnownJunction 0 10.37 47.89 6.15 3.46 6.54 19.14 2.08 41.16 62.56 35.08 52.12 129.04 67.04 127.61 27.44 37.43 77.23 50.24 14.02 124.64 0.00 3.12 0.00 28 ER10a ExonRegion 0 9.98 59.80 7.30 15.04 14.76 26.64 2.23 36.73 67.70 46.26 42.25 119.42 130.85 143.93 20.89 48.46 97.56 70.81 32.23 115.60 0.74 0.41 1.98 29 E10a_E11a KnownJunction 0 11.34 86.83 6.12 11.75 18.59 25.67 8.52 32.90 53.65 45.45 41.06 138.35 124.02 146.74 21.39 27.00 98.55 78.64 35.95 118.63 0.00 0.00 0.00 30 ER11a ExonRegion 0 7.24 69.28 8.56 17.38 21.18 19.66 2.72 40.45 57.17 35.17 31.91 112.48 109.60 135.13 21.53 33.62 82.33 58.86 24.85 99.73 0.72 0.00 2.86 31 E11a_E12a KnownJunction 0 10.00 50.85 4.02 12.92 22.24 5.22 0.00 28.88 63.05 31.27 34.69 116.89 123.37 130.97 29.05 33.07 82.75 68.77 17.88 90.25 0.00 0.00 0.00 32 ER12a ExonRegion 0 5.76 76.58 7.21 15.69 22.14 25.20 2.98 25.89 64.99 45.88 31.29 126.62 114.81 129.18 16.50 37.91 80.95 39.79 22.28 109.22 0.55 0.79 1.47 33 E12a_E13a KnownJunction 0 9.71 111.43 10.41 14.48 20.80 13.51 0.00 15.28 68.95 37.07 11.21 75.32 107.46 123.43 17.18 23.67 47.31 40.42 31.44 110.51 0.00 5.39 0.00 34 I12 Intron 0 2.93 10.12 7.37 18.53 13.17 3.25 3.22 10.83 9.06 19.75 0.86 3.24 3.17 1.37 1.46 1.81 1.83 2.19 4.58 7.89 0.00 0.92 0.49 35 I12_SR1 SilentIntronRegion 0 2.21 7.96 7.77 17.58 11.05 2.07 2.78 9.72 8.99 17.41 0.94 2.85 3.38 1.27 1.28 1.50 2.29 1.98 4.64 6.61 0.00 1.01 0.61 36 I12_AR1 ActiveIntronRegion 0 5.81 18.82 5.86 22.51 21.77 7.95 5.00 15.33 9.44 29.27 0.53 4.84 2.38 1.82 2.20 3.07 0.00 3.07 4.39 13.05 0.00 0.57 0.00 37 E13_Aa NovelBoundary 0 17.56 37.03 14.37 51.91 85.14 26.18 17.44 54.83 22.11 40.19 0.00 12.15 0.00 2.12 0.00 0.00 0.00 5.93 9.41 17.45 0.00 0.00 0.00 38 ER13a ExonRegion 0 20.27 185.30 32.36 119.74 91.33 44.85 21.17 82.08 82.15 121.03 25.67 97.81 89.03 104.53 15.91 28.39 47.45 46.35 45.79 129.76 1.66 1.70 2.05 39 E13_Da KnownBoundary 1 29.63 222.26 47.16 119.73 116.38 40.89 27.91 70.15 83.68 122.25 4.69 136.54 103.08 95.18 8.90 11.79 23.19 10.49 9.13 87.57 0.00 5.51 0.00 40 ER13b ExonRegion 0 3.73 62.79 6.69 27.80 27.39 17.68 8.71 20.90 24.19 33.58 4.92 24.15 25.85 24.15 4.42 6.95 10.19 9.81 9.92 33.32 0.32 1.66 0.55